Virtual reality visual feedback for hand-controlled scanning probe microscopy manipulation of single molecules

Philipp Leinen, Matthew F. B. Green, Taner Esat, Christian Wagner, F. Stefan Tautz and Ruslan Temirov
Beilstein J. Nanotechnol. 2015, 6, 2148–2153. https://doi.org/10.3762/bjnano.6.220

Supporting Information

Supporting Information File 1: Screenshot Oculus Rift movie showing different stages of manipulation (watch subtitles for additional information).
Format: MP4 Size: 30.1 MB Download
Supporting Information File 2: Interactive 3D models of the data shown in Figure 4. In order to view it unpack and open either ’df.html’ (frequency shift) or ’I.html’ (logarithm of the current) file.
Format: ZIP Size: 302.8 KB Download

Cite the Following Article

Virtual reality visual feedback for hand-controlled scanning probe microscopy manipulation of single molecules
Philipp Leinen, Matthew F. B. Green, Taner Esat, Christian Wagner, F. Stefan Tautz and Ruslan Temirov
Beilstein J. Nanotechnol. 2015, 6, 2148–2153. https://doi.org/10.3762/bjnano.6.220

How to Cite

Leinen, P.; Green, M. F. B.; Esat, T.; Wagner, C.; Tautz, F. S.; Temirov, R. Beilstein J. Nanotechnol. 2015, 6, 2148–2153. doi:10.3762/bjnano.6.220

Download Citation

Citation data can be downloaded as file using the "Download" button or used for copy/paste from the text window below.
Citation data in RIS format can be imported by all major citation management software, including EndNote, ProCite, RefWorks, and Zotero.

Citations to This Article

Up to 20 of the most recent references are displayed here.

Scholarly Works

  • Deeks, H. M.; Zinovjev, K.; Barnoud, J.; Mulholland, A. J.; van der Kamp, M. W.; Glowacki, D. R. Free energy along drug-protein binding pathways interactively sampled in virtual reality. Scientific reports 2023, 13, 16665. doi:10.1038/s41598-023-43523-x
  • Scheidt, J.; Diener, A.; Maiworm, M.; Müller, K.-R.; Findeisen, R.; Driessens, K.; Tautz, F. S.; Wagner, C. Concept for the Real-Time Monitoring of Molecular Configurations during Manipulation with a Scanning Probe Microscope. The journal of physical chemistry. C, Nanomaterials and interfaces 2023, 127, 13817–13836. doi:10.1021/acs.jpcc.3c02072
  • Kuťák, D.; Vázquez, P.; Isenberg, T.; Krone, M.; Baaden, M.; Byška, J.; Kozlíková, B.; Miao, H. State of the Art of Molecular Visualization in Immersive Virtual Environments. Computer Graphics Forum 2023, 42. doi:10.1111/cgf.14738
  • Kubanov, A. A.; Mahakova, Y. B.; Astakhova, I. V. Virtual reality as a way to modernize Russian medical education. National Health Care (Russia) 2022, 2, 47–54. doi:10.47093/2713-069x.2021.2.3.47-54
  • Turhan, B.; Gümüş, Z. H. A Brave New World: Virtual Reality and Augmented Reality in Systems Biology. Frontiers in bioinformatics 2022, 2. doi:10.3389/fbinf.2022.873478
  • Shannon, R. J.; Deeks, H. M.; Burfoot, E.; Clark, E. A.; Jones, A. J.; Mulholland, A. J.; Glowacki, D. R. Exploring human-guided strategies for reaction network exploration: Interactive molecular dynamics in virtual reality as a tool for citizen scientists. The Journal of chemical physics 2021, 155, 154106. doi:10.1063/5.0062517
  • Wang, A.; Thompson, M.; Uz-Bilgin, C.; Klopfer, E. Authenticity, Interactivity, and Collaboration in Virtual Reality Games: Best Practices and Lessons Learned. Frontiers in Virtual Reality 2021, 2, 734083. doi:10.3389/frvir.2021.734083
  • Leinen, P.; Esders, M.; Schütt, K. T.; Wagner, C.; Müller, K.-R.; Tautz, F. S. Autonomous robotic nanofabrication with reinforcement learning. Science advances 2020, 6. doi:10.1126/sciadv.abb6987
  • Eschmann, L.; Sabitova, A.; Temirov, R.; Tautz, F. S.; Krüger, P.; Rohlfing, M. Coverage-dependent anisotropy of the NTCDA/Ag(111) interface state dispersion. Physical Review B 2019, 100, 125155. doi:10.1103/physrevb.100.125155
  • Han, J.-H.; Kang, J. H.; Ju, B. K.; Kim, M. The optimization of structured illumination microscopy for the acquisition of 3D information of microscale objects. Journal of Digital Contents Society 2019, 20, 1679–1685. doi:10.9728/dcs.2019.20.8.1679
  • O'Connor, M. B.; Bennie, S. J.; Deeks, H. M.; Jamieson-Binnie, A.; Jones, A. J.; Shannon, R. J.; Walters, R. K.; Mitchell, T. J.; Mulholland, A. J.; Glowacki, D. R. Interactive molecular dynamics in virtual reality from quantum chemistry to drug binding: An open-source multi-person framework. The Journal of chemical physics 2019, 150, 220901. doi:10.1063/1.5092590
  • Tewari, S.; Bakermans, J.; Wagner, C.; Galli, F.; van Ruitenbeek, J. M. Intuitive human interface to a scanning tunnelling microscope: observation of parity oscillations for a single atomic chain. Beilstein journal of nanotechnology 2019, 10, 337–348. doi:10.3762/bjnano.10.33
  • Giessibl, F. J. The qPlus sensor, a powerful core for the atomic force microscope. The Review of scientific instruments 2019, 90, 011101. doi:10.1063/1.5052264
  • Thompson, M.; Wang, A.; Roy, D.; Klopfer, E. Authenticity, Interactivity, and Collaboration in VR Learning Games. Frontiers in robotics and AI 2018, 5, 133. doi:10.3389/frobt.2018.00133
  • Wagner, C.; Temirov, R.; Tautz, F. S. Perspectives of Molecular Manipulation and Fabrication. Molecular Architectonics; Springer International Publishing, 2017; pp 253–319. doi:10.1007/978-3-319-57096-9_11
  • Slater, M.; Sanchez-Vives, M. V. Enhancing Our Lives with Immersive Virtual Reality. Frontiers in Robotics and AI 2016, 3, 74. doi:10.3389/frobt.2016.00074
  • Leinen, P.; Green, M.; Esat, T.; Wagner, C.; Tautz, F. S.; Temirov, R. Hand Controlled Manipulation of Single Molecules via a Scanning Probe Microscope with a 3D Virtual Reality Interface. Journal of visualized experiments : JoVE 2016, 54506, 1–15. doi:10.3791/54506
  • Farahani, N.; Post, R.; Duboy, J.; Ahmed, I.; Kolowitz, B. J.; Krinchai, T.; Monaco, S. E.; Fine, J. L.; Hartman, D. J.; Pantanowitz, L. Exploring virtual reality technology and the Oculus Rift for the examination of digital pathology slides. Journal of pathology informatics 2016, 7, 22. doi:10.4103/2153-3539.181766
Other Beilstein-Institut Open Science Activities