Incorporation of perfluorohexyl-functionalised thiophenes into oligofluorene-truxenes: synthesis and physical properties

  1. Neil Thomson,
  2. Alexander L. Kanibolotsky,
  3. Joseph Cameron,
  4. Tell Tuttle,
  5. Neil J. Findlay and
  6. Peter J. Skabara

WestCHEM, Department of Pure and Applied Chemistry, University of Strathclyde, 295 Cathedral Street, Glasgow, G1 1XL, U.K.

  1. Corresponding author email

Associate Editor: D. O'Hagan
Beilstein J. Org. Chem. 2013, 9, 1243–1251. doi:10.3762/bjoc.9.141
Received 27 Feb 2013, Accepted 12 Jun 2013, Published 27 Jun 2013


Oligofluorene-functionalised truxenes containing perfluorohexylthiophene units at the terminal positions on the arms were synthesised, and their optical and electrochemical properties were investigated to determine the effect that the perfluorohexylthiophene unit has on the HOMO and LUMO properties of the oligomers. By synthesising a molecule with longer oligofluorene arms the effects of the perfluorohexylthiophene unit on larger oligomers was explored. The effect of steric hindrance from the perfluorohexyl chain was also evaluated by altering the position of the chain on the thiophene moiety.

Keywords: oligomers; perfluorinated-materials; star-shaped molecules; synthesis; truxene


Star-shaped oligomers share a common central unit with multiple arms branching from the core [1]. The morphology and electronic properties of these oligomers often vary from the linear versions of the arms alone.

10,15-Dihydro-5H-diindeno[1,2-a;1′,2′-c]fluorene, also known as truxene (Figure 1), is a heptacyclic polyarene with C3 symmetry that can be envisaged as three fluorenes that are superimposed through a common central benzene ring [2,3].


Figure 1: Labelled truxene and compounds T1 and T4.

Truxene has been used as a starting compound, or a core unit, for larger star-shaped polyarenes such as fullerene fragments [4] and liquid-crystalline compounds [5]. Positions C5, C10 and C15 can be functionalised with a range of substituents, commonly saturated alkyl chains, which can enhance the solubility and processability as well as reduce intermolecular π–π stacking [6], but there are also examples of unsaturated alkyl [7] and phenyl [8] substituents at these positions. Cross-coupling reactions at the C2, C7 and C12 positions is the usual method of attaching “arms” to the core to form the star-shaped oligomers, such as T1 and T4 (Figure 1), extending the conjugation length and altering the photophysical properties of the resulting oligomer. There are also less common examples of functionalisation at the C3, C8 and C13 positions [9].

Alkyl substituents attached to hetero- and carbocyles, which make up the conjugated backbone of oligomers and polymers, can also affect the properties of the material [10]. Alkyl chains or other functional groups can donate or withdraw electron density from the polymer chain, for example by inductive effects, altering the HOMO–LUMO levels and subsequent band gap in the process. One type of substituent that can be used is a perfluoroalkyl chain, where the high percentage of fluorine present gives rise to a large electron-withdrawing effect [11]. However, perfluoroalkyl halides are not suitable alkylating reagents for SN2 type reactions, which makes the attachment of these types of chains to aromatic cyclic compounds difficult without the use of a spacer group, such as an ethylene chain, which can lessen the inductive effect [12]. Due to the widespread industrial use of polythiophenes, such as P3HT, analogous poly(perfluoroalkyl)thiophenes have received some interest due to their ability to affect certain properties of the polymer, such as the electrochemistry and stability, as well as the improved chemical resistance and thermal stability that replacing alkyl hydrogen atoms with fluorine atoms affords [13].

Our group has previously published work on oligofluorene-functionalised truxenes [14], and it was in our interest to observe changes in the optical and electrochemical properties by introducing perfluorohexylthiophene units at the terminal positions of the oligofluorene arms. Planarity of the backbone is an important concept in conjugated organic oligomers and polymers, as any twist in the dihedral angle between aromatic repeat units can lessen the p-orbital overlap, breaking the effective conjugation length [15]. This planarity can be perturbed by the steric effects of substituents attached to the hetero- or carbocycles in the conjugated backbone. In order to observe if the position of the perfluorohexyl chains would have an effect, two molecules that are structural isomers were synthesised and studied to compare the optical and electrochemical properties. Furthermore, a significantly larger molecule was synthesised to observe how a molecule with longer conjugated arms would also be affected by the perfluorohexylthiophene units.

Results and Discussion

The synthesis of the oligofluorene-functionalised truxenes is outlined in Schemes 1–4. 3-Perfluorohexylthiophene (3) was synthesised from 3-bromothiophene (1) by initial halogen exchange, using the method described by Buchwald et al. [16], to afford 3-iodothiophene (2), which then underwent a copper-mediated coupling reaction with perfluorohexyl iodide (Scheme 1). Lithiation of 3 and treatment with perfluorohexyl iodide gave the product 2-iodo-3-perfluorohexylthiophene (4). The regioselectivity of this reaction was poor, and the product was obtained as a mixture with its isomer, 2-iodo-4-perfluorohexylthiophene, which was separated by column chromatography. Compound 4 then underwent Suzuki–Miyaura coupling with compound 5, which was synthesised according to our previously published method [17], and the product obtained, 6, was deprotected by bromination to give compound 7 and then reacted with bis(pinacolato)diboron to afford boronic ester 8.


Scheme 1: Synthesis of the thiophene-fluorene arm for the 3-isomer.

The synthetic route to 2-iodo-4-perfluorohexylthiophene (13) (Scheme 2) began with treatment of 3-bromothiophene (1) with lithium bis(trimethylsilyl)amide and chlorotrimethylsilane to afford 2-trimethylsilyl-3-bromothiophene (9). However, although the conditions were unchanged, the halogen exchange reaction used to afford 10 was poorer yielding than that which produced 2. This was due to incomplete conversion from the bromide to the iodide. The inability to separate 9 and 10 meant that this mixture was not further purified, and the mixture was taken forward to the next stage of the synthesis. The subsequent copper-mediated coupling reaction to afford 11 was also poor-yielding and a mixture of 9, 10 and 11 was obtained. Compound 11 was obtained pure by a fluorinous extraction process with perfluorohexanes from a 5% water/ethanol solution. Lithiation and treatment with perfluorohexyliodide afforded 12, which was deprotected with tetrabutylammonium fluoride to afford 13. The boronic ester 16 was then synthesised by the same steps applied to obtain compound 8 (see Scheme 1).


Scheme 2: Synthesis of the thiophene-fluorene arm for the 4-isomer.

T1-3FTh and T1-4FTh were then synthesised by Suzuki coupling of tribromohexahexyltruxene 17, which was synthesised according to our previously published method [14], and the relevant boronic ester, 8 or 16 (Scheme 3).


Scheme 3: Coupling of arms to the truxene core.

T4-4FTh (Scheme 4) was synthesised by coupling compound 16 with T3Br. The latter compound was obtained by our previously published method [17].


Scheme 4: Synthesis of T4-4FTh.

The absorption and emission spectra of the oligomers in solution (dichloromethane), shown in Figure 2, all exhibit strong π–π* transitions. The maximum absorption band was observed at 349 nm for T1-3FTh, 362 nm for T1-4FTh, and 380 nm for T4-4FTh. The maximum wavelength of emission was observed at 412 nm for T1-3FTh, 402 nm for T1-4FTh, and 421 nm for T4-4FTh. In comparison to the corresponding spectra of T1 and T4 (Table 1), the introduction of perfluorohexylthiophene units to the terminal positions on the arms leads to a red shift for both absorption and emission. The red shift within the 4FTh-substituted series (T1-4FTh and T4-4FTh) increases with increasing chain length. The emission spectrum for T1-4FTh also shows a pronounced vibronic feature at 418 nm, which is an indication of the planarity of the molecular ground state in comparison to that of T1-3FTh, where no vibronic splitting is observed. The emission spectrum of T4-4FTh also reveals the vibronic structure, although it is less pronounced, with a shoulder at 440 nm. The Stokes shifts for T1-4FTh and T4-4FTh are 40 and 41 nm respectively; however, the shift for T1-3FTh is larger, at around 63 nm. This is an indication that the excited state of T1-3FTh undergoes a greater conformational change before emission than that of T1-4FTh, which is further evidence of the greater planarity in the T1-4FTh ground state compared to that of its isomer. The optical HOMO–LUMO gaps were estimated from the onset of absorption and were recorded as 3.20, 3.12 and 3.03 eV for T1-3FTh, T1-4FTh and T4-4FTh, respectively. The HOMO–LUMO gap for T1-3FTh and T1-4FTh is slightly narrower than that for T1; however, there is not much difference between the HOMO–LUMO gap of T4-4FTh and that of T4.


Figure 2: Normalised absorbance (solid) and emission (dashed) of materials in solution (dichloromethane).

Table 1: Optical data for TX-xFTh and TX materials.

compound λmax (nm) absorption
(mM−1 cm−1)
λmax (nm) emission
T1-3FTh 349 387 306 3.20 412
T1-4FTh 362 397 323 3.12 402, 418 0.86
T4-4FTh 380 409 385 3.03 421, 440sh 0.93
T1a 343 3.29 375sh, 396, 416sh
T4a 374 3.05 411, 436, 460sh

aValues obtained from [14].

The results for the cyclic voltammetry of the oligomers are given in Table 2 (see Supporting Information File 1, Figures S1–S6 for the voltammograms). T1-3FTh showed one irreversible oxidation peak at +1.09 V, and a reduction peak was found at −2.22 V. From the onset of the oxidation and reduction peaks the HOMO level was estimated to be −5.72 eV and the LUMO −2.74 eV with reference to ferrocene, which was used as an internal standard and has a HOMO of −4.8 eV. In comparison to the HOMO and LUMO values for T1 [14] (−5.6 and −2.2 eV) there is a decrease in the HOMO and a large decrease in the LUMO, with a reduction in the HOMO–LUMO gap. For T1-4FTh, quasi-reversible oxidation peaks were found at +0.86 and +1.03 V, while irreversible peaks were found as +1.26 and +1.44 V. A reduction peak was observed at −2.84 V. From the onset of the oxidation and reduction peaks the HOMO level was estimated to be −5.55 eV, and the LUMO −2.39 eV. Comparing these values to that of T1, the HOMO is essentially the same with the LUMO decreased, resulting in a narrower electrochemical band gap. A similar effect is observed for T4-4FTh in comparison with T4 [14], where the HOMO is −5.53 eV compared to −5.5 eV for T4 and the LUMO is lower (−2.35 eV for T4-4FTh and −2.3 eV for T4). The electrochemical HOMO–LUMO gaps for T1-3FTh, T1-4FTh and T4-4FTh were close to those derived from the absorption spectra, (within ca. 0.2 eV), which is in line with the differences observed for T1 and T4.

Table 2: Electrochemical data for TX-XFTh and TX.

compound Eox (V) peaks
EPa/EPc or EPaa
HOMO Ered (V) peaks
T1-3FTh +1.09 −5.72 −2.22 −2.74 2.98
T1-4FTh +0.86/0.79
−5.55 −2.84 −2.39 3.16
T4-4FTh +0.91/+0.82c
−5.53 −2.59 −2.35 3.18
T1d −5.6 −2.2 3.4
T4d −5.5 −2.3 3.2

aNo cathodic peak is reported where the wave is irreversible. bPeak exists as a shoulder. cTwo unresolved single-electron peaks. dValues obtained from [14].

In order to rationalise the difference in optical and structural properties between the two isomers, DFT calculations were performed on the smaller truxenes. The T1-3FTh and T1-4FTh structures were optimised in the gas phase by using the BP86-D [18-20] functional with the def2-TZVP [21] basis set implemented in TURBOMOLE 6.3.1 [22]. The optimisations were carried out by using the RI-J approximation [23]. The hexyl chains on the fluorene units were shortened to methyl groups in the model in order to decrease the computational cost of the simulation. The main structural difference observed is the degree of twisting between the fluorene and thiophene in the two structures. The average dihedral angle in T1-3FTh is 40.9°, whilst there is a much smaller twist of 6.4° in T1-4FTh. The frontier orbitals of the isomers were also compared and are shown below (Figure 3 and Figure 4). The HOMO−1 and HOMO for both molecules (ΔE[T1-3FTh] = 0.0054 eV and ΔE[T1-4FTh] = 0.0030 eV) are essentially degenerate and show a splitting due to a slight break in symmetry. This is also the case for the LUMO and LUMO+1 of each isomer (ΔE[T1-3FTh] = 0.013 eV and ΔE[T1-4FTh] = 0.0047 eV). The HOMO−1 and HOMO of the compounds show there to be a larger contribution of the thiophene unit to the conjugation of the molecule in T1-4FTh compared to T1-3FTh. This reaffirms that the thiophene unit of T1-3FTh is too twisted to contribute significantly to the conjugation of the molecule.


Figure 3: HOMO−1 (bottom, left), HOMO (bottom, right), LUMO (top, left) and LUMO+1 (top, right) of T1-3FTh.


Figure 4: HOMO−1 (bottom, left), HOMO (bottom, right), LUMO (top, left) and LUMO+1 (top, right) of T1-4FTh.


In conclusion we have presented three new star-shaped oligomers, namely T1-3FTh, T1-4FTh, and T4-4FTh. For the smaller molecules, the presence of the powerfully electron-withdrawing perfluorohexyl chain within the molecules leads to a more stabilised LUMO, in comparison to the hydrogen-terminated molecule T1. The optical and electrochemical properties of the molecules with shorter oligofluorene arms are altered to a much greater extent than those of the molecules containing longer oligofluorene arms, where HOMO and LUMO levels as well as the optical HOMO–LUMO gaps remain essentially the same for the substituted and the parent systems. The electrochemical properties of T1-3FTh are more affected by the presence of the perfluoroalkyl thiophene substituent than those of T1-4FTh.

Supporting Information

Supporting Information File 1: Experimental procedures and cyclic voltammetry details.
Format: PDF Size: 959.0 KB Download


We would like to thank the EPSRC and Cambridge Display Technology for funding N.T.


  1. Kanibolotsky, A. L.; Perepichka, I. F.; Skabara, P. J. Chem. Soc. Rev. 2010, 39, 2695–2728. doi:10.1039/b918154g
    Return to citation in text: [1]
  2. Pei, J.; Wang, J.-L.; Cao, X.-Y.; Zhou, X.-H.; Zhang, W.-B. J. Am. Chem. Soc. 2003, 125, 9944–9945. doi:10.1021/ja0361650
    Return to citation in text: [1]
  3. Gómez-Lor, B.; de Frutos, Ó.; Ceballos, P. A.; Granier, T.; Echavarren, A. M. Eur. J. Org. Chem. 2001, 2107–2114. doi:10.1002/1099-0690(200106)2001:11<2107::AID-EJOC2107>3.0.CO;2-F
    Return to citation in text: [1]
  4. Gómez-Lor, B.; González-Cantalapiedra, E.; Ruiz, M.; de Frutos, Ó.; Cárdenas, D. J.; Santos, A.; Echavarren, A. M. Chem.–Eur. J. 2004, 10, 2601–2608. doi:10.1002/chem.200306023
    Return to citation in text: [1]
  5. Zhao, K.-Q.; Chen, C.; Monobe, H.; Hu, P.; Wang, B.-Q.; Shimizu, Y. Chem. Commun. 2011, 47, 6290–6292. doi:10.1039/c1cc10299k
    Return to citation in text: [1]
  6. Tseng, K.-P.; Kao, M.-T.; Tsai, T. W. T.; Hsu, C.-H.; Chan, J. C. C.; Shyue, J.-J.; Sun, S.-S.; Wong, K.-T. Chem. Commun. 2012, 48, 3515–3517. doi:10.1039/c2cc00099g
    Return to citation in text: [1]
  7. González-Cantalapiedra, E.; Ruiz, M.; Gómez-Lor, B.; Alonso, B.; García-Cuadrado, D.; Cárdenas, D. J.; Echavarren, A. M. Eur. J. Org. Chem. 2005, 4127–4140. doi:10.1002/ejoc.200500260
    Return to citation in text: [1]
  8. Kao, M.-T.; Chen, J.-H.; Chu, Y.-Y.; Tseng, K.-P.; Hsu, C.-H.; Wong, K.-T.; Chang, C.-W.; Hsu, C.-P.; Liu, Y.-H. Org. Lett. 2011, 13, 1714–1717. doi:10.1021/ol200227w
    Return to citation in text: [1]
  9. Lai, W.-Y.; He, Q.-Y.; Ma, Z.; Huang, W. Chem. Lett. 2009, 38, 286–287. doi:10.1246/cl.2009.286
    Return to citation in text: [1]
  10. Casado, J.; Pappenfus, T. M.; Miller, L. L.; Mann, K. R.; Ortí, E.; Viruela, P. M.; Pou-Amérigo, R.; Hernández, V.; López Navarrete, J. T. J. Am. Chem. Soc. 2003, 125, 2524–2534. doi:10.1021/ja027835p
    Return to citation in text: [1]
  11. Lee, J.-K.; Fong, H. H.; Zakhidov, A. A.; McCluskey, G. E.; Taylor, P. G.; Santiago-Berrios, M.; Abruña, H. D.; Holmes, A. B.; Malliaras, G. G.; Ober, C. K. Macromolecules 2010, 43, 1195–1198. doi:10.1021/ma902179s
    Return to citation in text: [1]
  12. Facchetti, A.; Yoon, M.-H.; Stern, C. L.; Hutchison, G. R.; Ratner, M. A.; Marks, T. J. J. Am. Chem. Soc. 2004, 126, 13480–13501. doi:10.1021/ja048988a
    Return to citation in text: [1]
  13. Endo, T.; Takeoka, Y.; Rikukawa, M.; Sanui, K. Synth. Met. 2003, 135–136, 333–334. doi:10.1016/S0379-6779(02)00537-4
    Return to citation in text: [1]
  14. Kanibolotsky, A. L.; Berridge, R.; Skabara, P. J.; Perepichka, I. F.; Bradley, D. D. C.; Koeberg, M. J. Am. Chem. Soc. 2004, 126, 13695–13702. doi:10.1021/ja039228n
    Return to citation in text: [1] [2] [3] [4] [5] [6]
  15. Tsao, H. N.; Müllen, K. Chem. Soc. Rev. 2010, 39, 2372–2386. doi:10.1039/b918151m
    Return to citation in text: [1]
  16. Klapars, A.; Buchwald, S. L. J. Am. Chem. Soc. 2002, 124, 14844–14845. doi:10.1021/ja028865v
    Return to citation in text: [1]
  17. Belton, C. R.; Kanibolotsky, A. L.; Kirkpatrick, J.; Orofino, C.; Elmasly, S. E. T.; Stavrinou, P. N.; Skabara, P. J.; Bradley, D. D. C. Adv. Funct. Mater. 2013, 23, 2792–2804. doi:10.1002/adfm.201202644
    Return to citation in text: [1] [2]
  18. Becke, A. D. Phys. Rev. A 1988, 38, 3098–3100. doi:10.1103/PhysRevA.38.3098
    Return to citation in text: [1]
  19. Perdew, J. P. Phys. Rev. B 1986, 33, 8822–8824. doi:10.1103/PhysRevB.33.8822
    Return to citation in text: [1]
  20. Grimme, S. J. Comput. Chem. 2006, 27, 1787–1799. doi:10.1002/jcc.20495
    Return to citation in text: [1]
  21. Weigend, F.; Ahlrichs, R. Phys. Chem. Chem. Phys. 2005, 7, 3297–3305. doi:10.1039/b508541a
    Return to citation in text: [1]
  22. Ahlrichs, R.; Bär, M.; Häser, M.; Horn, H.; Kölmel, C. Chem. Phys. Lett. 1989, 162, 165–169. doi:10.1016/0009-2614(89)85118-8
    Return to citation in text: [1]
  23. Feyereisen, M.; Fitzgerald, G.; Komornicki, A. Chem. Phys. Lett. 1993, 208, 359–363. doi:10.1016/0009-2614(93)87156-W
    Return to citation in text: [1]

Interesting articles

Clara Orofino-Pena, Diego Cortizo-Lacalle, Joseph Cameron, Muhammad T. Sajjad, Pavlos P. Manousiadis, Neil J. Findlay, Alexander L. Kanibolotsky, Dimali Amarasinghe, Peter J. Skabara, Tell Tuttle, Graham A. Turnbull and Ifor D. W. Samuel

Diego Cortizo-Lacalle, Calvyn T. Howells, Upendra K. Pandey, Joseph Cameron, Neil J. Findlay, Anto Regis Inigo, Tell Tuttle, Peter J. Skabara and Ifor D. W. Samuel

Luíse Azevedo, Larissa Faqueti, Marina Kritsanida, Antonia Efstathiou, Despina Smirlis, Gilberto C. Franchi Jr, Grégory Genta-Jouve, Sylvie Michel, Louis P. Sandjo, Raphaël Grougnet and Maique W. Biavatti


Logo OA

Submission is open for “Spatial Effects in Polymers” and "Lipids"

Logo OA

The 2015 Impact Factor is 2.697 according to the Thomson Reuters Journal Citation Reports.

© 2013 Thomson et al; licensee Beilstein-Institut.
This is an Open Access article under the terms of the Creative Commons Attribution License (, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
The license is subject to the Beilstein Journal of Organic Chemistry terms and conditions: (

Back to Article List