<?xml version="1.0" encoding="ASCII"?><!DOCTYPE article PUBLIC "-//BEILSTEIN-INSTITUT//DTD Journal Article DTD v0.4.4 20130724//EN" "https://www.beilstein-journals.org/bjoc/content/xml/journalarticle.v044.dtd">
<article locale="en_US" public-id="1860-5397-7-140" publisher="Beilstein-Institut" journal="Beilstein Journal of Organic Chemistry" journal-abbreviated="Beilstein J. Org. Chem." journal-code="bjoc" issn="1860-5397" coden="BJOCBH" year="2011" volume="7" article="140" first-page="1205" last-page="1214" type="full-research-paper">
<author first-name="Damjan" last-name="Makuc" email="damjan.makuc@ki.si" affiliations="a1 a2"/>
<author first-name="Jennifer" middle-names="R" last-name="Hiscock" email="J.Hiscock@soton.ac.uk" affiliations="a3"/>
<author first-name="Mark" middle-names="E" last-name="Light" email="m.e.light@soton.ac.uk" affiliations="a3"/>
<author first-name="Philip" middle-names="A" last-name="Gale" email="philip.gale@soton.ac.uk" affiliations="a3" corresponding-author="yes"/>
<author first-name="Janez" last-name="Plavec" email="janez.plavec@ki.si" affiliations="a1 a2 a4" corresponding-author="yes"/>
<affiliation id="a1" institution-required="yes">Slovenian NMR Centre, National Institute of Chemistry, Hajdrihova 19, SI-1000 Ljubljana, Slovenia</affiliation>
<affiliation id="a2" institution-required="yes">EN&#8594;FIST Centre of Excellence, Dunajska 156, SI-1000 Ljubljana, Slovenia</affiliation>
<affiliation id="a3" institution-required="yes">Chemistry, University of Southampton, Southampton SO17 1BJ, United Kingdom</affiliation>
<affiliation id="a4" institution-required="yes">Faculty of Chemistry and Chemical Technology, University of Ljubljana, SI-1000 Ljubljana, Slovenia</affiliation>
<article-note>
<chunk>This article is part of the Thematic Series "Supramolecular chemistry II".</chunk>
</article-note>
<editor first-name="Christoph" middle-names="A" last-name="Schalley" role="guest-editor"/>
<submission-date day="31" month="5" year="2011" hour="18" minute="34"/>
<acceptance-date day="3" month="8" year="2011" hour="7" minute="38"/>
<publication-date day="2" month="9" year="2011" hour="10" minute="52"/>
<title>
<chunk>NMR studies of anion-induced conformational changes in diindolylureas and diindolylthioureas</chunk>
</title>
<keyword>
<chunk>anion recognition</chunk>
</keyword>
<keyword>
<chunk>conformation analysis</chunk>
</keyword>
<keyword>
<chunk>host&#8211;guest systems</chunk>
</keyword>
<keyword>
<chunk>NMR spectroscopy</chunk>
</keyword>
<abstract-section>
<paragraph>
<chunk>The conformational properties of 1,3-diindolylureas and thioureas were studied by a combination of heteronuclear NMR spectroscopy and quantum mechanics calculations. NOE experiments showed that the </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformer along the C7&#8211;N7&#945; bonds was predominant in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> solution in the absence of anions. Anion-induced changes in the </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H and </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N chemical shifts confirm the weak binding of chloride anions with negligible conformational changes. Strong deshielding of ureido protons and moderate deshielding of indole NH was observed upon the addition of acetate, benzoate, bicarbonate and dihydrogen phosphate, which indicated that the predominant hydrogen bond interactions occurred at the urea donor groups. Binding of oxo-anions caused conformational changes along the C7&#8211;N7&#945; bonds and the </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">syn</chunk>
<chunk> conformer was preferred for anion&#8211;receptor complexes. The conformational changes upon anion binding are in good agreement with energetic preferences established by ab initio calculations.</chunk>
</paragraph>
</abstract-section>
<abstract-graphic public-id="1860-5397-7-140-graphical-abstract"/>
<external-link type="doi" public-id="10.3762/bjoc.7.140"/>
<section>
<title>
<chunk>Introduction</chunk>
</title>
<paragraph>
<chunk>In the last two decades, remarkable efforts have been made in the field of the development of synthetic anion receptors, motivated by prospective applications in recognition, separation, guest inclusion and catalysis </chunk>
<link target="b1"/>
<link target="b2"/>
<link target="b3"/>
<link target="b4"/>
<link target="b5"/>
<link target="b6"/>
<link target="b7"/>
<link target="b8"/>
<link target="b9"/>
<link target="b10"/>
<link target="b11"/>
<link target="b12"/>
<link target="b13"/>
<chunk>. The fundamental role of anions in biological and chemical processes drives much of this research. Biomolecules such as the sulfate binding protein </chunk>
<link target="b14"/>
<chunk> and phosphate binding protein </chunk>
<link target="b15"/>
<chunk> employ hydrogen bonds as the key driving force to bind or transport anions through cell membranes. Hydrogen bonding interactions are extensively employed in synthetic anion receptors comprising groups such as amides, pyrroles, indoles, ureas and triazoles, as well as in ammonium, guanidinium and imidazolium moieties used as hydrogen bond donors </chunk>
<link target="b16"/>
<link target="b17"/>
<link target="b18"/>
<link target="b19"/>
<link target="b20"/>
<link target="b21"/>
<link target="b22"/>
<link target="b23"/>
<chunk>. Amongst neutral anion receptor systems, indole and related heterocycles, such as carbazole, 2,2'-biindole and indolo[1,2-</chunk>
<chunk italic="yes">b</chunk>
<chunk>]carbazoles, have recently attracted significant attention </chunk>
<link target="b24"/>
<link target="b25"/>
<link target="b26"/>
<link target="b27"/>
<link target="b28"/>
<link target="b29"/>
<link target="b30"/>
<link target="b31"/>
<chunk>. Indole contains a single hydrogen bond donor group, which is employed in biological systems to bind anions such as chloride </chunk>
<link target="b32"/>
<chunk> and sulfate </chunk>
<link target="b14"/>
<chunk>.</chunk>
</paragraph>
<paragraph>
<chunk>We have recently analyzed the conformational preferences of several 2,7-disubstituted indoles with amide substituents at C2 and urea substituents at C7, which showed preference for distinct conformations in the presence and in the absence of anions </chunk>
<link target="b33"/>
<link target="b34"/>
<link target="b35"/>
<chunk>. In addition, indole and urea groups were strongly involved in hydrogen-bonding interactions with the bound anionic guest, whilst the amide group interacted only weakly with the bound anion. These observations led to the design of diindolylureas and diindolylthioureas </chunk>
<link target="b36"/>
<link target="b37"/>
<link target="b38"/>
<chunk>. These compounds have remarkably high affinities for oxo-anions such as phosphate and sulfate for neutral receptors in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/0.5% water and have been shown to perturb the p</chunk>
<chunk italic="yes">K</chunk>
<chunk subscript="yes">a</chunk>
<chunk> of bound guests (</chunk>
<link target="t1"/>
<chunk>) </chunk>
<link target="b38"/>
<link target="b39"/>
<chunk>. X-ray crystal structures of a variety of complexes with anions revealed the adoption of the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformation in the solid state upon anion complexation. With the urea analogues, such as </chunk>
<chunk bold="yes">1</chunk>
<chunk>, this is accompanied by higher order complex formation with oxo-anions in the solid state. For example, with dihydrogen phosphate, three equivalents of receptor complex to a single anion, which has doubly deprotonated, resulting in the formation of a complex in which twelve hydrogen bonds stabilize the PO</chunk>
<chunk subscript="yes">4</chunk>
<chunk superscript="yes">3&#8722;</chunk>
<chunk> anion. In solution, the thiourea analogues such as compound </chunk>
<chunk bold="yes">2</chunk>
<chunk> show significantly lower affinities for oxo-anions than do the urea analogues. We had previously proposed that this may be due to the larger size of the sulfur atom resulting in a lower propensity of these systems to adopt a planar conformation. Whilst the conformational properties of these compounds have been explored by single crystal X-ray diffraction in the solid-state, a detailed analysis of the conformational properties of the these compounds in solution, in the absence and presence of oxo-anions, has yet to be performed and may help shed light on the high affinity of these systems for oxo-anions. Therefore, in the current work the conformational preorganization of bis-indole receptors </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
<chunk> (</chunk>
<link target="f1"/>
<chunk>), as well as the conformational changes of these systems upon binding of chloride and several oxo-anions, were studied by NMR spectroscopy and supported by energetic preferences established from ab initio calculations.</chunk>
</paragraph>
<float target="f1"/>
<float target="t1"/>
</section>
<section>
<title>
<chunk>Results and Discussion</chunk>
</title>
<section>
<title>
<chunk>Synthesis</chunk>
</title>
<paragraph>
<chunk>Compounds </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">3</chunk>
<chunk> were synthesized following a previously reported methodology </chunk>
<link target="b36"/>
<link target="b37"/>
<link target="b38"/>
<link target="b39"/>
<chunk>. Compound </chunk>
<chunk bold="yes">4</chunk>
<chunk> was prepared by reaction of 7-amino-</chunk>
<chunk italic="yes">N</chunk>
<chunk>-phenyl-1</chunk>
<chunk italic="yes">H</chunk>
<chunk>-indole-2-carboxamide (0.27 g, 1.07 mM) with 7-isothiocyanato-</chunk>
<chunk italic="yes">N</chunk>
<chunk>-phenyl-1</chunk>
<chunk italic="yes">H</chunk>
<chunk>-indole-2-carboxamide (0.31 g, 1.07 mM) in pyridine in 27% yield (see </chunk>
<link target="si1"/>
<chunk> for details).</chunk>
</paragraph>
<section>
<title>
<chunk>Structural features and NMR chemical shifts</chunk>
</title>
<paragraph>
<chunk>The conformational properties of diindolylureas and diindolylthioureas </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
<chunk>, shown in </chunk>
<link target="f1"/>
<chunk>, were evaluated by means of NMR spectroscopy. Proton and </chunk>
<chunk superscript="yes">13</chunk>
<chunk>C NMR resonances were assigned through 1D and 2D spectra, while </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N chemical shifts were determined by </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H&#8211;</chunk>
<chunk superscript="yes">15</chunk>
<chunk>N correlations in HSQC and HMBC spectra. Notable </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H and </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N NMR chemical shifts of </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
<chunk> are shown in </chunk>
<link target="t2"/>
<chunk>. It should be noted that only one set of signals was observed for both indole rings in all four receptors, due to the symmetry of the compounds. The full NMR data set together with </chunk>
<chunk superscript="yes">13</chunk>
<chunk>C NMR chemical shifts is reported in </chunk>
<link target="si1"/>
<chunk>.</chunk>
</paragraph>
<float target="t2"/>
<paragraph>
<chunk>Indole NH proton resonances were found between 10.8 and 11.7 ppm. Thioureido containing compounds </chunk>
<chunk bold="yes">2</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk> exhibited slight downfield shifts of H1 and H7&#945; with respect to ureido receptors </chunk>
<chunk bold="yes">1</chunk>
<chunk> and </chunk>
<chunk bold="yes">3</chunk>
<chunk> (</chunk>
<link target="t2"/>
<chunk>). N1 chemical shifts showed only minor variations as a result of structural differences in </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
<chunk>. The most significant differences in chemical shifts between the ureido and thioureido functionalized receptors were observed for H7&#945; and N7&#945; atoms (&#916;&#948;</chunk>
<chunk subscript="yes">H</chunk>
<chunk> = 0.8 and &#916;&#948;</chunk>
<chunk subscript="yes">N</chunk>
<chunk> = 22 ppm, </chunk>
<link target="t2"/>
<chunk>). Compounds </chunk>
<chunk bold="yes">3</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk> contain phenylamide substituents at C2 and hence two more NH groups (</chunk>
<link target="f1"/>
<chunk>). Considerable deshielding of the H3 and H6 resonances was observed in </chunk>
<chunk bold="yes">3</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk> with respect to the nonsubstituted indole moieties in </chunk>
<chunk bold="yes">1</chunk>
<chunk> and </chunk>
<chunk bold="yes">2</chunk>
<chunk>. The downfield shift of &#948;</chunk>
<chunk subscript="yes">H3</chunk>
<chunk> was attributed directly to the presence of the phenylamide group at C2. Deshielding of H6 (&#916;&#948; 0.4&#8211;0.5 ppm) in </chunk>
<chunk bold="yes">3</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk> with respect to </chunk>
<chunk bold="yes">1</chunk>
<chunk> and </chunk>
<chunk bold="yes">2</chunk>
<chunk>, respectively, was much larger than the deshielding of H4 (&#916;&#948; 0.1 ppm), possibly due to a more efficient conjugation.</chunk>
</paragraph>
</section>
<section>
<title>
<chunk superscript="yes">1</chunk>
<chunk>H and </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N NMR chemical shift changes in </chunk>
<chunk bold="yes">1</chunk>
<chunk> upon addition of anions</chunk>
</title>
<paragraph>
<link target="f2"/>
<chunk> shows </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H chemical shift changes of </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the presence of one equivalent of chloride, acetate, benzoate, bicarbonate and dihydrogen phosphate anions. The protons that are most affected by anion&#8211;receptor interaction were found to be H1, H6 and H7&#945;. Only minor &#916;&#948;</chunk>
<chunk subscript="yes">H7&#945;</chunk>
<chunk> and negligible differences of &#948;</chunk>
<chunk subscript="yes">H1</chunk>
<chunk> and &#948;</chunk>
<chunk subscript="yes">H6</chunk>
<chunk> were observed in the presence of chloride anions (</chunk>
<link target="f2" fragment="a"/>
<chunk> and </chunk>
<link target="f2" fragment="b"/>
<chunk>). The very weak interactions between chloride and </chunk>
<chunk bold="yes">1</chunk>
<chunk> could be due to competing interactions of the polar DMSO molecules for the hydrogen bond donor groups of the receptor, and the weak basicity of the chloride. This is supported by the stability constant determinations previously reported, and presented in </chunk>
<link target="t1"/>
<chunk>. Considerable downfield shifts of &#948;</chunk>
<chunk subscript="yes">H7&#945;</chunk>
<chunk> were observed upon addition of acetate, benzoate and bicarbonate anions (&#916;&#948; &#8776; 2 ppm, Figures 2c&#8211;2e), which suggested strong interaction of ureido NH protons with these anions. In addition, the strong deshielding of indolyl H1 protons corroborates its participation in the hydrogen bond formation with carboxylate and bicarbonate moieties (&#916;&#948; &#8776; 1 ppm). Planar oxo-anions interact both with H1 and H7&#945; due to their Y-shaped geometry. The tetrahedral geometry of the dihydrogen phosphate anion allows strong interaction with all four hydrogen bond donor groups, which is reflected in the substantial deshielding of the H1 and H7&#945; protons (</chunk>
<link target="f2" fragment="f"/>
<chunk>). Interestingly, one set of signals was observed for each type of anion on the NMR timescale, which suggested that the symmetry of the receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk> is preserved upon interactions with anions. The stability constant determinations presented in </chunk>
<link target="t1"/>
<chunk> also support the finding that this compound interacts selectively with oxo-anions.</chunk>
</paragraph>
<float target="f2"/>
<paragraph>
<chunk>Anion&#8211;receptor interactions assessed by </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H chemical shift changes were corroborated by </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N NMR data. Weak shielding of N1 in </chunk>
<chunk bold="yes">1</chunk>
<chunk> was observed upon addition of acetate, benzoate and bicarbonate anions, whereas addition of dihydrogen phosphate anions led to deshielding of N1 (</chunk>
<link target="f2" fragment="g"/>
<chunk>). In contrast, N7&#945; was deshielded upon addition of anions (</chunk>
<link target="f2" fragment="g"/>
<chunk>). The strongest deshielding of 11.2 ppm was observed for the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;BzO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex.</chunk>
</paragraph>
</section>
<section>
<title>
<chunk>Conformational properties of </chunk>
<chunk bold="yes">1</chunk>
<chunk> and its complexes with anions</chunk>
</title>
<paragraph>
<chunk>The rotational flexibility of the ureido moiety allows numerous conformations of receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk>. Among them three major, energetically preferred, conformers are likely to be observed (</chunk>
<link target="f3"/>
<chunk>). The </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformer, where NH protons form a convergent hydrogen-bonding array, is expected to be adopted in the presence of bound anionic guests, based on the previous solid-state studies. On the other hand, this conformer is unlikely to be abundant in the absence of anions, due to repulsion between the hydrogen bond donor groups. The other two rotamers, namely </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> and </chunk>
<chunk italic="yes">syn&#8211;anti</chunk>
<chunk>, can be stabilized by intramolecular NH&#8211;CO hydrogen bonds, which represent competition to anion&#8211;receptor interactions and therefore make conformational studies even more appealing.</chunk>
</paragraph>
<float target="f3"/>
<paragraph>
<chunk>The conformational characteristics of diindolylurea </chunk>
<chunk bold="yes">1</chunk>
<chunk> were assessed by the use of 1D difference NOE experiments in the absence and in the presence of anions. The orientation along the C7&#8211;N7&#945; bonds was established by comparative evaluation of NOE enhancements of H7&#945; with H1 and H6 protons. The saturation of H7&#945; in </chunk>
<chunk bold="yes">1</chunk>
<chunk> gave strong NOE at H6 (10.4%) and moderate NOE at H1 (4.3%), which suggested that the </chunk>
<chunk italic="yes">anti</chunk>
<chunk> orientation prevails along the linkage between ureido moiety and indole ring (</chunk>
<link target="f4" fragment="a"/>
<chunk>). As the observed NOE enhancements are primarily a function of the H6&#8211;H7&#945; and H1&#8211;H7&#945; distances, we compared their values in the optimized </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> (d(H6&#8211;H7&#945;) = 2.28 &#197;) and </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> (d(H1&#8211;H7&#945;) = 2.32 &#197;) structures and established a minor difference of 0.04 &#197; which would be reflected in a 1% change in the NOE enhancements. The observed difference between NOE enhancements in the uncomplexed form of receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk> was over 6%, which led us to conclude that the </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> conformer is predominant in the DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> solution. In addition, the </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformer of </chunk>
<chunk bold="yes">1</chunk>
<chunk> with its plane of symmetry along the carbonyl bond is in agreement with the single set of resonances in the NMR spectra. On the other hand, the </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> rotamer shows a twofold rotational symmetry and is expected to exhibit distinct shielding of nuclei, imposed by the orientations of H6 and H1 protons in the two indole rings with respect to the carbonyl group. However, the populations of the two distinct conformational families are averaged on the NMR time scale.</chunk>
</paragraph>
<float target="f4"/>
<paragraph>
<chunk>Only minor changes in the NOE enhancements were observed upon addition of chloride anions to </chunk>
<chunk bold="yes">1</chunk>
<chunk>. The strongest NOE was observed between H7&#945; and H6 (9.9%), which was of comparable magnitude to the NOE between the same protons in the absence of anions (</chunk>
<link target="t3"/>
<chunk>). On the other hand, stronger NOE enhancement between H7&#945; and H1 (7.0%) suggested predominance of the </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> rotamer of </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the presence of chloride anions in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> solution. Interestingly, the </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">syn</chunk>
<chunk> rotamer was observed in the crystal structure, where conformational preferences are dictated by other forces, such as crystal packing. These observations are in agreement with minute </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H chemical shift changes and the weak stability constant of </chunk>
<chunk bold="yes">1</chunk>
<chunk> for the binding of chloride anions.</chunk>
</paragraph>
<float target="t3"/>
<paragraph>
<chunk>Considerable changes in the NOE enhancements were observed upon addition of acetate anions to </chunk>
<chunk bold="yes">1</chunk>
<chunk>. The saturation of H7&#945; resulted in a much stronger NOE at H1 (12.0%) with respect to H6 (4.8%), which suggested that addition of acetate anions led to conformational changes along the C7&#8211;N7&#945; bond (</chunk>
<link target="t3"/>
<chunk>). The </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">syn</chunk>
<chunk> conformer is preferred for the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex in solution (</chunk>
<link target="f4" fragment="b"/>
<chunk>). In a similar manner, significant changes in the NOEs were observed upon addition of benzoate anions. The saturation of H7&#945; gave much stronger NOE at H1 (10.4%) with respect to H6 (4.8%, </chunk>
<link target="t3"/>
<chunk>). Broad NH proton signals prevented the study of the conformation of the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;HCO</chunk>
<chunk subscript="yes">3</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex through NOE experiments. NOE enhancements between H1 and H7&#945; (4.2&#8211;5.3%) were considerably stronger with respect to NOE between H7&#945; and H6 (0&#8211;2.8%) upon addition of dihydrogen phosphate to </chunk>
<chunk bold="yes">1</chunk>
<chunk>. The observed NOE enhancements for </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;H</chunk>
<chunk subscript="yes">2</chunk>
<chunk>PO</chunk>
<chunk subscript="yes">4</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex suggest a preference for the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformer in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>.</chunk>
</paragraph>
</section>
<section>
<title>
<chunk>Conformational analysis of </chunk>
<chunk bold="yes">1</chunk>
<chunk> and its anion complexes by quantum mechanics calculations</chunk>
</title>
<paragraph>
<chunk>The observations on the conformational equilibria in the absence and in the presence of anions were corroborated by quantum mechanical calculations at the B3LYP/6-311+G(d,p) level of theory by means of the Gaussian 03 </chunk>
<link target="b40"/>
<chunk> and Gaussian 09 </chunk>
<link target="b41"/>
<chunk> programs. Indole rings represent the rigid part of the anion receptors, while the substituents on the ureido moiety in </chunk>
<chunk bold="yes">1</chunk>
<chunk> exhibit conformational freedom. [C6&#8211;C7&#8211;N7&#945;&#8211;C7&#946;] torsion angles were defined to follow energetic changes induced by reorientation of the indolyl moieties along the C7&#8211;N7&#945; bonds. The energy surface for the [C6&#8211;C7&#8211;N7&#945;&#8211;C7&#946;] torsion angles, with 30&#176; resolution, shows that the conformer with the lowest energy is in the </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> region (</chunk>
<link target="f5"/>
<chunk>).</chunk>
</paragraph>
<float target="f5"/>
<paragraph>
<chunk>Energy minimization of the </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformer of </chunk>
<chunk bold="yes">1</chunk>
<chunk> was performed without any constraints, whereas </chunk>
<chunk italic="yes">syn</chunk>
<chunk> orientations in the </chunk>
<chunk italic="yes">syn&#8211;anti</chunk>
<chunk> as well as the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> cases were restrained along the [C6&#8211;C7&#8211;N7&#945;&#8211;C7&#946;] torsion angle, while other degrees of freedom were freely optimized. The relative energies for the three representative conformers are reported in </chunk>
<link target="t4"/>
<chunk>. The </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformer of </chunk>
<chunk bold="yes">1</chunk>
<chunk> was found to be the lowest in energy, while the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformer showed considerably higher energy (11.6 kcal&#183;mol</chunk>
<chunk superscript="yes">&#8722;1</chunk>
<chunk>). The angle between the two indolyl rings in the freely optimized </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> conformer was 53.9&#176; (</chunk>
<link target="f6" fragment="a"/>
<chunk>). The relative energies of the three representative conformers were also computed for complexes of </chunk>
<chunk bold="yes">1</chunk>
<chunk> with chloride, acetate and bicarbonate anions. The </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformer exhibited the lowest relative energy for all three anion&#8211;receptor complexes (</chunk>
<link target="t4"/>
<chunk>). The </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformers of anion&#8211;receptor complexes exhibited considerably higher energies between 6.2 and 7.3 kcal&#183;mol</chunk>
<chunk superscript="yes">&#8722;1</chunk>
<chunk>. The angle between the two indolyl rings in the freely optimized </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">syn</chunk>
<chunk> conformer of the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex was found to be 21.6&#176; (</chunk>
<link target="f6" fragment="b"/>
<chunk>). The optimized structure, shown in </chunk>
<link target="f6" fragment="b"/>
<chunk>, shows a single acetate anion bound to the four NH groups in the receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk> with N&#183;&#183;&#183;O distances in the range from 2.75 to 2.95 &#197; and N&#8211;H&#183;&#183;&#183;O angles in the range 170&#8211;176&#176;.</chunk>
</paragraph>
<float target="t4"/>
<float target="f6"/>
<paragraph>
<chunk>In order to evaluate the role of DMSO on the energetic preferences of rotamers, relative energies were calculated with the use of Tomasi's polarized continuum model </chunk>
<link target="b42"/>
<link target="b43"/>
<chunk>. Preferences amongst the three rotamers were retained (</chunk>
<link target="t4"/>
<chunk>). Only small differences below 1.2 kcal&#183;mol</chunk>
<chunk superscript="yes">&#8722;1</chunk>
<chunk> were found between the three distinct conformers in the case of the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;Cl</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex. In particular, the negligible energy differences between </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> and </chunk>
<chunk italic="yes">syn&#8211;anti</chunk>
<chunk> rotamers are in agreement with the NOE data that suggested predominance of the </chunk>
<chunk italic="yes">syn&#8211;anti</chunk>
<chunk> conformer upon addition of chloride. The energetic preference of the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> over the </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformer of 3.8 and 3.0&#160;kcal&#183;mol</chunk>
<chunk superscript="yes">&#8722;1</chunk>
<chunk> was observed for the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> and the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;HCO</chunk>
<chunk subscript="yes">3</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complexes, respectively (</chunk>
<link target="t4"/>
<chunk>). The energetic preferences of the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8211;</chunk>
<chunk>complex are in excellent agreement with the NOE experiments, which showed conformational reorganizations of </chunk>
<chunk bold="yes">1</chunk>
<chunk> upon addition of acetate anions.</chunk>
</paragraph>
</section>
<section>
<title>
<chunk>Conformational features of receptors </chunk>
<chunk bold="yes">2</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
</title>
<paragraph>
<chunk>The choice of thio (</chunk>
<chunk bold="yes">2</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk>) versus oxo (</chunk>
<chunk bold="yes">1</chunk>
<chunk> and </chunk>
<chunk bold="yes">3</chunk>
<chunk>) ureido functionalities, as well as the C2 functionalization of the indole scaffolds with pendant phenyl amides in </chunk>
<chunk bold="yes">3</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk>, allows tuning of the binding affinities of the receptors. Negligible &#916;&#948; values were observed for </chunk>
<chunk bold="yes">2</chunk>
<chunk> upon interaction with chloride anions (</chunk>
<link target="f7" fragment="a"/>
<chunk>), which suggests a very weak interaction between chloride and </chunk>
<chunk bold="yes">2</chunk>
<chunk>, similar to the weak interactions observed between chloride and </chunk>
<chunk bold="yes">1</chunk>
<chunk>. Chemical shift changes showed that the main interaction between receptor </chunk>
<chunk bold="yes">2</chunk>
<chunk> and trigonal planar anions (acetate, benzoate and bicarbonate) occurred at the H7&#945; protons (</chunk>
<link target="f7" fragment="a"/>
<chunk>). Addition of dihydrogen phosphate anions caused considerable deshielding of the H1 and H7&#945; protons. Comparison of the &#916;&#948; values for </chunk>
<chunk bold="yes">1</chunk>
<chunk> and </chunk>
<chunk bold="yes">2</chunk>
<chunk> upon interaction with the anions showed that the urea derivative </chunk>
<chunk bold="yes">1</chunk>
<chunk> exhibited a higher preference for anion binding relative to thiourea </chunk>
<chunk bold="yes">2</chunk>
<chunk> (the data were supported by the stability constant determinations performed previously and shown in </chunk>
<link target="t1"/>
<chunk>). The larger sulfur atom can prevent the receptor </chunk>
<chunk bold="yes">2</chunk>
<chunk> from adopting a planar conformation, which may reduce the affinity of this receptor for anionic guests. Conformational studies of </chunk>
<chunk bold="yes">2</chunk>
<chunk> with the use of NOE enhancements showed that the </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> conformer is the preferred conformation in the absence of anions. No apparent conformational changes were observed upon addition of chloride anions to </chunk>
<chunk bold="yes">2</chunk>
<chunk>. The overlap of the proton signals as well as the broad line-width of the H1 and H7&#945; NMR resonances prevented conformational analysis of </chunk>
<chunk bold="yes">2</chunk>
<chunk> upon addition of other anions used in the study. The conformational preferences of </chunk>
<chunk bold="yes">2</chunk>
<chunk> were evaluated by quantum mechanical calculations at the B3LYP/6-311+G(d,p) level of theory. The freely optimized </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformer of </chunk>
<chunk bold="yes">2</chunk>
<chunk> exhibited the lowest energy and the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformer was 8.0 kcal&#183;mol</chunk>
<chunk superscript="yes">&#8722;1</chunk>
<chunk> higher in energy, in vacuo. Interestingly, the two indolyl rings were not coplanar, with the angle between the two indolyl planes found to be 98.9&#176; (</chunk>
<link target="f8" fragment="a"/>
<chunk>). In the case of </chunk>
<chunk bold="yes">2</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformer exhibited the lowest energy, while the </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformer was 7.4 kcal&#183;mol</chunk>
<chunk superscript="yes">&#8722;1</chunk>
<chunk> higher in energy, in vacuo. The optimized structure of </chunk>
<chunk bold="yes">2</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex is shown in </chunk>
<link target="f8" fragment="b"/>
<chunk>, where the two acetate oxygen atoms are hydrogen bonded to the four NH groups, with N&#183;&#183;&#183;O distances in the range from 2.76 to 2.94 &#197; and N&#8211;H&#183;&#183;&#183;O angles in the range 168&#8211;177&#176;. The angle between the indolyl rings in the freely optimized </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">syn</chunk>
<chunk> conformer of the </chunk>
<chunk bold="yes">2</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex was 68.0&#176;.</chunk>
</paragraph>
<float target="f7"/>
<float target="f8"/>
<paragraph>
<chunk>Bis-amide functionalized diindolylurea </chunk>
<chunk bold="yes">3</chunk>
<chunk> exhibits two extra NH groups, which introduces additional possibilities for interactions with anions. The addition of chloride anions to </chunk>
<chunk bold="yes">3</chunk>
<chunk> induced negligible chemical shifts, suggesting only weak interactions with this anion (</chunk>
<link target="f7" fragment="b"/>
<chunk>). The strong deshielding of H7&#945; and moderate deshielding of H1 protons in the </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> and </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;BzO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complexes suggests a significant interaction between the anions and the ureido functionality. Interestingly, negligible deshielding of H2&#946; in </chunk>
<chunk bold="yes">3</chunk>
<chunk> was observed and this suggests that the amide protons do not participate in the interaction with acetate and benzoate (</chunk>
<link target="f7" fragment="b"/>
<chunk>). The observed &#916;&#948; values support the idea that carboxylates were strongly bound to the urea H7&#945; protons which prevented interaction between the anions and the amide H2&#946; protons. Analogously, large chemical shift changes of up to 1 ppm were observed for the H7&#945; and H1 protons upon the addition of bicarbonate anions to </chunk>
<chunk bold="yes">3</chunk>
<chunk>. Strong deshielding of H1, H2&#946; and H7&#945; protons in the </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;H</chunk>
<chunk subscript="yes">2</chunk>
<chunk>PO</chunk>
<chunk subscript="yes">4</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex suggests that all the NH donor groups are involved in interactions with the dihydrogen phosphate anions (</chunk>
<link target="f7" fragment="b"/>
<chunk>).</chunk>
</paragraph>
<paragraph>
<chunk>The conformational properties of </chunk>
<chunk bold="yes">3</chunk>
<chunk> and of its complexes with different anions were studied by NOE measurements. The saturation of the H1 protons resulted in moderately negative NOEs at the H7&#945; and H2&#946; protons. The cross peaks in the 2D NOESY spectra between the NH protons and bulk water suggest chemical exchange that complicated the conformational study along the C2&#8211;C2&#945; and C7&#8211;N7&#945; bonds. Nevertheless, strong NOE enhancements between the H2&#946; and H3 protons suggest an orientation along the C2&#8211;C2&#945; bond where the H2&#946; and H3 protons are spatially close and the C2&#945; carbonyl group is oriented towards the indole H1 proton. NOE enhancements between H2&#946; and H3 protons were observed also in the </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> and </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;BzO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complexes, which suggests that the orientation of the carboxamide group along the C2&#8211;C2&#945; bond is retained in </chunk>
<chunk bold="yes">3</chunk>
<chunk> upon addition of carboxylate anions. This observation was supported by negligible &#916;&#948; values for the H2&#946; protons in the </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> and </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;BzO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complexes with respect to </chunk>
<chunk bold="yes">3</chunk>
<chunk>. The conformational preferences and the proposed binding mode in the </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex are shown in </chunk>
<link target="f9"/>
<chunk>. A conformational study of </chunk>
<chunk bold="yes">3</chunk>
<chunk> in the presence of bicarbonate and dihydrogen phosphate anions was hindered by the broadened and overlapped </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H signals. In the solid state compound </chunk>
<chunk bold="yes">3</chunk>
<chunk> crystallized with tetrabutylammonium dihydrogen phosphate as the monohydrogen phosphate complex </chunk>
<link target="b38"/>
<chunk>.</chunk>
</paragraph>
<float target="f9"/>
<paragraph>
<chunk>Only negligible chemical shifts were observed for </chunk>
<chunk bold="yes">4</chunk>
<chunk> upon addition of chloride anions (</chunk>
<link target="f7" fragment="c"/>
<chunk>). Considerable deshielding of H7&#945; protons in </chunk>
<chunk bold="yes">4</chunk>
<chunk> by up to 2.3 ppm in the </chunk>
<chunk bold="yes">4</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk>&#183;BzO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complexes suggested that the major interactions between carboxylates and receptor </chunk>
<chunk bold="yes">4</chunk>
<chunk> occurred at the ureido functionality (</chunk>
<link target="f7" fragment="c"/>
<chunk>). The conformational properties of the </chunk>
<chunk bold="yes">4</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8211;</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk>&#183;BzO</chunk>
<chunk superscript="yes">&#8211;</chunk>
<chunk> complexes could not be determined due to the broad and overlapped proton signals. Unfortunately, excessively broad and overlapped </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H signals for the </chunk>
<chunk bold="yes">4</chunk>
<chunk>&#183;HCO</chunk>
<chunk subscript="yes">3</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk>&#183;H</chunk>
<chunk subscript="yes">2</chunk>
<chunk>PO</chunk>
<chunk subscript="yes">4</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complexes prevented unambiguous assignment of the NMR resonances and hence the conformational studies of these complexes. In the solid state compound </chunk>
<chunk bold="yes">4</chunk>
<chunk> crystallized with tetrabutylammonium dihydrogen phosphate as the monohydrogen phosphate complex (see </chunk>
<link target="si2"/>
<chunk> for more details).</chunk>
</paragraph>
</section>
</section>
</section>
<section>
<title>
<chunk>Conclusion</chunk>
</title>
<paragraph>
<chunk>The bis-indole receptors </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
<chunk> were characterized by heteronuclear NMR spectroscopy. NOE based conformational analysis was supported by quantum mechanics calculations and revealed that diindolylurea </chunk>
<chunk bold="yes">1</chunk>
<chunk> exhibited conformational preorganization in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> solution. The </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> conformer, which could be stabilized by intramolecular hydrogen bonds between the C7&#946; carbonyl group and indole NH proton, was predominant for </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the absence of anions. The energetically minimized structure of </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> conformer showed a plane of symmetry along the ureido carbonyl group and deviation from coplanarity amongst the indolyl rings. Anion-induced chemical shift changes suggested weak binding of chloride anions and negligible conformational changes for </chunk>
<chunk bold="yes">1</chunk>
<chunk>. Addition of acetate, benzoate, bicarbonate and dihydrogen phosphate resulted in strong deshielding of the ureido protons and moderate deshielding of the indole H1, which indicated that the main hydrogen bond interaction occurred at the urea donor groups of </chunk>
<chunk bold="yes">1</chunk>
<chunk>. Furthermore, binding of anions caused conformational changes along the C7&#8211;N7&#945; bonds, and the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformer was predominant in the anion&#8211;receptor complexes according to both NOE enhancements and ab initio calculations in solution. The freely optimized </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">syn</chunk>
<chunk> conformer of the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex retained a plane of symmetry along the carbonyl bond and showed a smaller deviation from indole ring coplanarity than did the </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> conformer of </chunk>
<chunk bold="yes">1</chunk>
<chunk>. The conformational preferences for </chunk>
<chunk bold="yes">2</chunk>
<chunk> were analogous to those observed for receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk>. Unfortunately, excessively broad and overlapped </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H signals prevented a detailed conformational analysis of the anion&#8211;receptor complexes for </chunk>
<chunk bold="yes">3</chunk>
<chunk> and </chunk>
<chunk bold="yes">4</chunk>
<chunk>.</chunk>
</paragraph>
</section>
<section>
<title>
<chunk>Experimental</chunk>
</title>
<section>
<title>
<chunk>NMR experiments</chunk>
</title>
<paragraph>
<chunk superscript="yes">1</chunk>
<chunk>H, </chunk>
<chunk superscript="yes">13</chunk>
<chunk>C and </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N NMR spectra were acquired on a Varian Unity Inova 300 MHz NMR spectrometer. All data were recorded in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> at 298 K. Chemical shifts were referenced to the residual solvent signal of DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> at &#948; 2.50 ppm for </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H (297.801 MHz) and &#948; 39.50 ppm for </chunk>
<chunk superscript="yes">13</chunk>
<chunk>C (76.190 MHz), while </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N (30.188 MHz) chemical shifts were referenced relative to external benzamide (&#948; 103.55 ppm). Individual resonances were assigned on the basis of their chemical shifts, signal intensities, multiplicity of resonances, H&#8211;H coupling constants as well as by means of a series of 2D NMR experiments (COSY, gHSQC and gHMBC). The saturation delay in the 1D difference NOE experiment was 5.0 s. All anions were added as tetrabutylammonium salts except bicarbonate which was added as a tetraethylammonium salt. NOESY spectra were acquired with mixing time of 100 and 300&#160;ms.</chunk>
</paragraph>
<section>
<title>
<chunk>Ab initio calculations</chunk>
</title>
<paragraph>
<chunk>Initial structures were generated by Chem3D Pro 10.0 software and energy minimization at the B3LYP/6-311+G(d,p) level was performed for </chunk>
<chunk bold="yes">1</chunk>
<chunk> and </chunk>
<chunk bold="yes">2</chunk>
<chunk> without any constraints for the </chunk>
<chunk italic="yes">anti</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">anti</chunk>
<chunk> conformers, by means of Gaussian 03 </chunk>
<link target="b40"/>
<chunk> and Gaussian 09 </chunk>
<link target="b41"/>
<chunk>. </chunk>
<chunk italic="yes">Syn</chunk>
<chunk> orientations in the </chunk>
<chunk italic="yes">syn&#8211;anti</chunk>
<chunk> as well as the </chunk>
<chunk italic="yes">syn&#8211;syn</chunk>
<chunk> conformers of </chunk>
<chunk bold="yes">1</chunk>
<chunk> and </chunk>
<chunk bold="yes">2</chunk>
<chunk> were restrained along the [C6&#8211;C7&#8211;N7&#945;&#8211;C7&#946;] torsion angle while other degrees of freedom were freely optimized. Ab initio calculations of anion&#8211;receptor complexes were carried out without any constraints for the </chunk>
<chunk italic="yes">syn</chunk>
<chunk>&#8211;</chunk>
<chunk italic="yes">syn</chunk>
<chunk> conformers, where anions were placed initially at the expected equilibrium distance to the H1 and H7&#945; protons. The positions of the anions were freely optimized. Energy minimizations of the </chunk>
<chunk italic="yes">syn&#8211;anti</chunk>
<chunk> and </chunk>
<chunk italic="yes">anti&#8211;anti</chunk>
<chunk> conformers of the anion&#8211;receptor complexes were restrained along the [C6&#8211;C7&#8211;N7&#945;&#8211;C7&#946;] torsion angle while other degrees of freedom were freely optimized. The tetrabutylammonium countercation was omitted in the geometry optimization of the anion&#8211;receptor complexes. Frequency calculations verified that the optimized geometries were stable points on the potential energy surface. Relative energies in solution were calculated by means of Tomasi's polarized continuum model, where the dielectric constant of DMSO was used (&#949; = 46.7).</chunk>
</paragraph>
</section>
</section>
</section>
<album-graphics>
<graphic public-id="1860-5397-7-140-3"/>
<graphic public-id="1860-5397-7-140-4"/>
<graphic public-id="1860-5397-7-140-6"/>
<graphic public-id="1860-5397-7-140-8"/>
</album-graphics>
<figures>
<figure id="f1">
<caption>
<paragraph>
<chunk>Anion receptors </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
<chunk> together with their atomic numbering scheme.</chunk>
</paragraph>
</caption>
<graphic public-id="1860-5397-7-140-1"/>
</figure>
<figure id="f2">
<caption>
<paragraph>
<chunk superscript="yes">1</chunk>
<chunk>H NMR spectra of </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the absence of anions (a) and upon addition of one equivalent of the following anions: Chloride (b), acetate (c), benzoate (d), bicarbonate (e) and dihydrogen phosphate (f). All spectra were recorded in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> at 298 K. (g) </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H and </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N NMR chemical shift changes, &#916;&#948; = &#948; (in the presence of anion) &#8211; &#948; (in the absence of anions), induced by addition of one equivalent of different anions to receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk>.</chunk>
</paragraph>
</caption>
<graphic public-id="1860-5397-7-140-2"/>
</figure>
<figure id="f3">
<caption>
<paragraph>
<chunk>Three representative conformational families of rotamers of </chunk>
<chunk bold="yes">1</chunk>
<chunk>. Notations refer to the orientations along [C6&#8211;C7&#8211;N7&#945;&#8211;C7&#946;] fragments.</chunk>
</paragraph>
</caption>
<graphic public-id="1860-5397-7-140-3"/>
</figure>
<figure id="f4">
<caption>
<paragraph>
<chunk>NOE enhancements of </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the absence of anions (a) and upon addition of one equivalent of acetate anions (b).</chunk>
</paragraph>
</caption>
<graphic public-id="1860-5397-7-140-4"/>
</figure>
<figure id="f5">
<caption>
<paragraph>
<chunk>Surface plot of the relative potential energy of </chunk>
<chunk bold="yes">1</chunk>
<chunk> as a function of the two constitutive [C6&#8211;C7&#8211;N7&#945;&#8211;C7&#946;] torsion angles. Individual geometries were optimized at the B3LYP/6-311+G(d,p) level of theory at 30&#176; resolution.</chunk>
</paragraph>
</caption>
<graphic public-id="1860-5397-7-140-5"/>
</figure>
<figure id="f6">
<caption>
<paragraph>
<chunk>Freely optimized structure at the B3LYP/6-311+G(d,p) level of theory and side view showing deviation from coplanarity defined by the angle between the indolyl rings of receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the absence of anions (a) and for the </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex (b).</chunk>
</paragraph>
</caption>
<graphic public-id="1860-5397-7-140-6"/>
</figure>
<figure id="f7">
<caption>
<paragraph>
<chunk superscript="yes">1</chunk>
<chunk>H NMR chemical shift changes, &#916;&#948; = &#948; (in the presence of anions) &#8211; &#948; (in the absence of anions), induced by addition of one equivalent of different anions to receptors </chunk>
<chunk bold="yes">2</chunk>
<chunk> (a), </chunk>
<chunk bold="yes">3</chunk>
<chunk> (b) and </chunk>
<chunk bold="yes">4</chunk>
<chunk> (c). Note, there is no H2&#946; proton in </chunk>
<chunk bold="yes">2</chunk>
<chunk>.</chunk>
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</caption>
<graphic public-id="1860-5397-7-140-7"/>
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<figure id="f8">
<caption>
<paragraph>
<chunk>Freely optimized structures at the B3LYP/6-311+G(d,p) level of theory and side view showing deviation from coplanarity defined by the angle between the indolyl rings of </chunk>
<chunk bold="yes">2</chunk>
<chunk> (a) and </chunk>
<chunk bold="yes">2</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> complex (b).</chunk>
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</caption>
<graphic public-id="1860-5397-7-140-8"/>
</figure>
<figure id="f9">
<caption>
<paragraph>
<chunk>Conformational preferences and proposed binding mode for the </chunk>
<chunk bold="yes">3</chunk>
<chunk>&#183;AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
<chunk> 1:1 complex.</chunk>
</paragraph>
</caption>
<graphic public-id="1860-5397-7-140-9"/>
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</figures>
<tables>
<table id="t1">
<caption>
<paragraph>
<chunk>Stability constants of compound </chunk>
<chunk bold="yes">1</chunk>
<chunk> measured in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/0.5% water, DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/10% water and DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/25% water and compound </chunk>
<chunk bold="yes">2</chunk>
<chunk> in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/0.5% water at 298 K by </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H NMR titration techniques </chunk>
<link target="b37"/>
<chunk>.</chunk>
</paragraph>
</caption>
<table-row type="header1">
<table-cell vertical-alignment="top">
<paragraph>
<chunk>Anion</chunk>
<chunk superscript="yes">a</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>Compound </chunk>
<chunk bold="yes">1</chunk>
<chunk> in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/0.5% water</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>Compound </chunk>
<chunk bold="yes">1</chunk>
<chunk> in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/10% water</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>Compound </chunk>
<chunk bold="yes">1</chunk>
<chunk> in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/25% water</chunk>
</paragraph>
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<table-cell vertical-alignment="top">
<paragraph>
<chunk>Compound </chunk>
<chunk bold="yes">2</chunk>
<chunk> in DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk>/0.5% water</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="5" type="horizontal-line"/>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>Cl</chunk>
<chunk superscript="yes">&#8722;</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>128</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>17</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>74</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>CH</chunk>
<chunk subscript="yes">3</chunk>
<chunk>CO</chunk>
<chunk subscript="yes">2</chunk>
<chunk superscript="yes">&#8722;</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>&gt;10</chunk>
<chunk superscript="yes">4</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>774</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>20</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>1620</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>C</chunk>
<chunk subscript="yes">6</chunk>
<chunk>H</chunk>
<chunk subscript="yes">5</chunk>
<chunk>CO</chunk>
<chunk subscript="yes">2</chunk>
<chunk superscript="yes">&#8722;</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>&gt;10</chunk>
<chunk superscript="yes">4</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>521</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>precipitate</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>477</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>H</chunk>
<chunk subscript="yes">2</chunk>
<chunk>PO</chunk>
<chunk subscript="yes">4</chunk>
<chunk superscript="yes">&#8722;</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>&gt;10</chunk>
<chunk superscript="yes">4</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>5170</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>160</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top">
<paragraph>
<chunk>1630</chunk>
</paragraph>
</table-cell>
</table-row>
<table-footer>
<paragraph>
<chunk superscript="yes">a</chunk>
<chunk>Anions added as tetrabutylammonium salts.</chunk>
</paragraph>
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<table id="t2">
<caption>
<paragraph>
<chunk>Selected </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H and </chunk>
<chunk superscript="yes">15</chunk>
<chunk>N NMR chemical shifts for </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4</chunk>
<chunk> (in ppm).</chunk>
<chunk superscript="yes">a</chunk>
</paragraph>
</caption>
<table-row type="header1">
<table-cell/>
<table-cell>
<paragraph>
<chunk>H1</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>H2&#946;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>H7&#945;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>H2</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>H3</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>H6</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>N1</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>N2&#946;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>N7&#945;</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="10" type="horizontal-line"/>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk bold="yes">1</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>10.78</chunk>
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</table-cell>
<table-cell>
<paragraph>
<chunk>&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>8.64</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.35</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>6.44</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.08</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>136.5</chunk>
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</table-cell>
<table-cell>
<paragraph>
<chunk>&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>102.7</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk bold="yes">2</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>11.03</chunk>
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<table-cell>
<paragraph>
<chunk>&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>9.48</chunk>
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</table-cell>
<table-cell>
<paragraph>
<chunk>7.36</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>6.46</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.03</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>136.3</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>124.9</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk bold="yes">3</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>11.62</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>10.29</chunk>
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</table-cell>
<table-cell>
<paragraph>
<chunk>8.97</chunk>
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<table-cell>
<paragraph>
<chunk>&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.49</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.59</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>134.5</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>128.6</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>104.6</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell vertical-alignment="top">
<paragraph>
<chunk bold="yes">4</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>11.68</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>10.26</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>9.72</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.48</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.39</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>134.9</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>129.0</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>126.6</chunk>
</paragraph>
</table-cell>
</table-row>
<table-footer>
<paragraph>
<chunk superscript="yes">a</chunk>
<chunk>In DMSO-</chunk>
<chunk italic="yes">d</chunk>
<chunk subscript="yes">6</chunk>
<chunk> at 298 K.</chunk>
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<table id="t3">
<caption>
<paragraph>
<chunk>Selected NOE enhancements for </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the absence and in the presence of different anions (in %).</chunk>
</paragraph>
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<table-row type="header1">
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>Saturated:</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>H1</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>H6</chunk>
</paragraph>
</table-cell>
<table-cell vertical-alignment="top" horizontal-alignment="center" column-span="2">
<paragraph>
<chunk>H7&#945;</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="5" type="horizontal-line"/>
</table-row>
<table-row type="header2">
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<paragraph>
<chunk>Enhanced:</chunk>
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</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>H7&#945;</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>H7&#945;</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>H1</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>H6</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="5" type="horizontal-line"/>
</table-row>
<table-row>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>no anion</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>3.2</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>3.8</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>4.3</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>10.4</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>Cl</chunk>
<chunk superscript="yes">&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>4.2</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>2.2</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>7.0</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>9.9</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>AcO</chunk>
<chunk superscript="yes">&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>7.2</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>1.0</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>12.0</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>4.8</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>BzO</chunk>
<chunk superscript="yes">&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>7.2</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>0.9</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>10.4</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>4.8</chunk>
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</table-cell>
</table-row>
<table-row>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>HCO</chunk>
<chunk subscript="yes">3</chunk>
<chunk superscript="yes">&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>&#8211;</chunk>
<chunk superscript="yes">a</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>0.0</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>&#8211;</chunk>
<chunk superscript="yes">a</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>4.7</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>H</chunk>
<chunk subscript="yes">2</chunk>
<chunk>PO</chunk>
<chunk subscript="yes">4</chunk>
<chunk superscript="yes">&#8211;</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>4.2</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>0.0</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>5.3</chunk>
</paragraph>
</table-cell>
<table-cell horizontal-alignment="center">
<paragraph>
<chunk>2.8</chunk>
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</table-cell>
</table-row>
<table-footer>
<paragraph>
<chunk superscript="yes">a</chunk>
<chunk>Broad NH signals in the baseline.</chunk>
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<table id="t4">
<caption>
<paragraph>
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<chunk superscript="yes">a</chunk>
<chunk> (in kcal&#183;mol</chunk>
<chunk superscript="yes">&#8722;1</chunk>
<chunk>) of receptor </chunk>
<chunk bold="yes">1</chunk>
<chunk> in vacuo and in DMSO, in the absence and in the presence of anions.</chunk>
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<table-row type="header1">
<table-cell>
<paragraph>
<chunk>anion</chunk>
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<table-cell>
<paragraph>
<chunk>conformer</chunk>
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</table-cell>
<table-cell>
<paragraph>
<chunk>in vacuo</chunk>
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</table-cell>
<table-cell>
<paragraph>
<chunk>in DMSO</chunk>
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</table-cell>
</table-row>
<table-row>
<table-cell column-span="4" type="horizontal-line"/>
</table-row>
<table-row>
<table-cell row-span="3">
<paragraph>
<chunk>no anion</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk italic="yes">anti&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>5.09</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>2.74</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;syn</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>11.61</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>6.60</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="4" type="horizontal-line"/>
</table-row>
<table-row>
<table-cell row-span="3">
<paragraph>
<chunk>Cl</chunk>
<chunk superscript="yes">&#8722;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk italic="yes">anti&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>6.50</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>1.20</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>1.84</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.12</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;syn</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="4" type="horizontal-line"/>
</table-row>
<table-row>
<table-cell row-span="3">
<paragraph>
<chunk>AcO</chunk>
<chunk superscript="yes">&#8722;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk italic="yes">anti&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>7.26</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>3.75</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>2.82</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>1.74</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;syn</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="4" type="horizontal-line"/>
</table-row>
<table-row>
<table-cell row-span="3">
<paragraph>
<chunk>HCO</chunk>
<chunk subscript="yes">3</chunk>
<chunk superscript="yes">&#8722;</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk italic="yes">anti&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>6.21</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>2.97</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;anti</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>2.02</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>1.31</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell>
<paragraph>
<chunk italic="yes">syn&#8211;syn</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
<table-cell>
<paragraph>
<chunk>0.00</chunk>
</paragraph>
</table-cell>
</table-row>
<table-row>
<table-cell column-span="4" type="horizontal-line"/>
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<table-footer>
<paragraph>
<chunk superscript="yes">a</chunk>
<chunk>Relative energies are reported with respect to the lowest energy (arbitrarily set to 0.00 kcal/mol) in the absence and in the presence of anions. Geometry optimizations were carried out at B3LYP/6-311+G(d,p).</chunk>
</paragraph>
</table-footer>
</table>
</tables>
<substances>
<substance id="1860-5397-7-140-ZRJYVMPHGZJHQR-UHFFFAOYSA-N">
<inchi-key>ZRJYVMPHGZJHQR-UHFFFAOYSA-N</inchi-key>
<inchi>InChI=1S/C17H14N4O/c22-17(20-13-5-1-3-11-7-9-18-15(11)13)21-14-6-2-4-12-8-10-19-16(12)14/h1-10,18-19H,(H2,20,21,22)</inchi>
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M  V30 21 C 294.24609 -62.93266 0 0
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M  V30 4 1 4 5
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M  V30 6 2 6 7
M  V30 7 1 7 8
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M  V30 19 1 17 18
M  V30 20 2 18 19
M  V30 21 1 19 8
M  V30 22 1 15 20
M  V30 23 2 20 21
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M  V30 END BOND
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M  END
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<backref ref="1860-5397-7-140-3" left="201.85469" right="299.22583" top="27.193207" bottom="64.60562"/>
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<supporting-information>
<supporting-information-file id="si1" public-id="1860-5397-7-140-S1">
<caption>
<paragraph>
<chunk>Experimental for the synthesis of compound </chunk>
<chunk bold="yes">4</chunk>
<chunk> and details of the crystal structure of the HPO</chunk>
<chunk subscript="yes">4</chunk>
<chunk superscript="yes">2&#8722;</chunk>
<chunk> complex of </chunk>
<chunk bold="yes">4</chunk>
<chunk>, </chunk>
<chunk superscript="yes">1</chunk>
<chunk>H and </chunk>
<chunk superscript="yes">13</chunk>
<chunk>C NMR data for </chunk>
<chunk bold="yes">1</chunk>
<chunk>&#8211;</chunk>
<chunk bold="yes">4,</chunk>
<chunk> 1D difference NOE spectra for </chunk>
<chunk bold="yes">1</chunk>
<chunk> in the absence and upon addition of one equivalent of acetate anions.</chunk>
</paragraph>
</caption>
</supporting-information-file>
<supporting-information-file id="si2" public-id="1860-5397-7-140-S2">
<caption>
<paragraph>
<chunk>Crystallographic data of the complex of compound </chunk>
<chunk bold="yes">4</chunk>
<chunk> with tetrabutylammonium dihydrogen phosphate (</chunk>
<chunk bold="yes">4</chunk>
<chunk>&#183;TBA</chunk>
<chunk subscript="yes">2</chunk>
<chunk>&#183;HPO</chunk>
<chunk subscript="yes">4</chunk>
<chunk>).</chunk>
</paragraph>
</caption>
</supporting-information-file>
</supporting-information>
<end-section>
<title>
<chunk>Acknowledgements</chunk>
</title>
<paragraph>
<chunk>We gratefully acknowledge the financial support of the Slovenian Research Agency (ARRS, program no. P1-0242), COST D-31, EAST-NMR (grant no. 228461) and Bio-NMR (grant no. 261863) FP7 projects. PAG thanks the EPSRC for support and the access to the crystallographic facilities at the University of Southampton.</chunk>
</paragraph>
</end-section>
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<copyright year="2011" holder="Makuc et al; licensee Beilstein-Institut." link="http://creativecommons.org/licenses/by/2.0">
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</article>
