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Search for "oligodeoxyribonucleotides" in Full Text gives 7 result(s) in Beilstein Journal of Organic Chemistry.

Synthesis of 3,4,5-trisubstituted isoxazoles in water via a [3 + 2]-cycloaddition of nitrile oxides and 1,3-diketones, β-ketoesters, or β-ketoamides

  • Md Imran Hossain,
  • Md Imdadul H. Khan,
  • Seong Jong Kim and
  • Hoang V. Le

Beilstein J. Org. Chem. 2022, 18, 446–458, doi:10.3762/bjoc.18.47

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  • oxide and strained alkenes has been used to achieve the high-density functionalization of oligodeoxyribonucleotides [29]. However, the alkenes need to be highly strained in order for this reaction to occur without the need for an additional metal catalyst. As an alternative to the mild acidic conditions
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Published 22 Apr 2022

Double-headed nucleosides: Synthesis and applications

  • Vineet Verma,
  • Jyotirmoy Maity,
  • Vipin K. Maikhuri,
  • Ritika Sharma,
  • Himal K. Ganguly and
  • Ashok K. Prasad

Beilstein J. Org. Chem. 2021, 17, 1392–1439, doi:10.3762/bjoc.17.98

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  • nucleoside monomers 125a–c were incorporated into oligodeoxyribonucleotides via phosphoramidite derivatization of the C-3′ hydroxy group present in the moiety. The oligonucleotides thus synthesized were found to stabilize the duplex formed with complementary DNA [69]. Nielsen and co-workers [43][70
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Published 08 Jun 2021

Synthesis of 10-O-aryl-substituted berberine derivatives by Chan–Evans–Lam coupling and investigation of their DNA-binding properties

  • Peter Jonas Wickhorst,
  • Mathilda Blachnik,
  • Denisa Lagumdzija and
  • Heiko Ihmels

Beilstein J. Org. Chem. 2021, 17, 991–1000, doi:10.3762/bjoc.17.81

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  • buffer solution. Oligodeoxyribonucleotides (HPLC purified) d[A(GGGTAA)3GGG] (22AG), F21T [fluo-G3(TTAG3)3-tamra; fluo = fluorescein, tamra = tetramethylrhodamine], Fa2T [fluo-(ACAG3TGT)2-tamra], FmycT [fluo-TGAG3TG3TAG3TG3TA-tamra] and FkitT [fluo-AG3AG3CGCTG3AG2AG3-tamra] were purchased from Biomers.net
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Published 04 May 2021

Synthesis of oligonucleotides on a soluble support

  • Harri Lönnberg

Beilstein J. Org. Chem. 2017, 13, 1368–1387, doi:10.3762/bjoc.13.134

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  • Scheme 1). Compared to oligodeoxyribonucleotides (ODNs), the synthesis of oligoribonucleotides (ORNs) is complicated by the presence of an additional nucleophilic functionality, viz. the 2´-OH that has to be kept protected as long as basic conditions are required during synthesis and deprotection of the
  • , impressive examples of classical convergent synthesis [31][32][33][34] and exploitation of solid-supported reagents in solution [35][36] have been reported. The present review, however, surveys only the progress of ON synthesis on a soluble support. Review Synthesis of oligodeoxyribonucleotides by
  • related reductively cleavable disulfide-linked support 7 [50]. Synthesis of oligodeoxyribonucleotides by phosphoramidite chemistry As mentioned above, phosphoramidite chemistry is nowadays the method of choice for the solid-supported synthesis of oligonucleotides both in small and large scale. The first
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Published 12 Jul 2017

Preparation of a disulfide-linked precipitative soluble support for solution-phase synthesis of trimeric oligodeoxyribonucleotide 3´-(2-chlorophenylphosphate) building blocks

  • Amit M. Jabgunde,
  • Alejandro Gimenez Molina,
  • Pasi Virta and
  • Harri Lönnberg

Beilstein J. Org. Chem. 2015, 11, 1553–1560, doi:10.3762/bjoc.11.171

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  • -protected oligodeoxyribonucleotide trimer 3’-pTpdCBzpdGibu-5’ as its 3’-(2-chlorophenyl phosphate) was achieved by reductive cleavage of the disulfide bond. Keywords: disulfide linker; oligodeoxyribonucleotides; phosphotriester chemistry; precipitation; soluble support; Introduction Synthetic nucleic
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Published 07 Sep 2015

A comparative study of the interactions of cationic hetarenes with quadruplex-DNA forming oligonucleotide sequences of the insulin-linked polymorphic region (ILPR)

  • Darinka Dzubiel,
  • Heiko Ihmels,
  • Mohamed M. A. Mahmoud and
  • Laura Thomas

Beilstein J. Org. Chem. 2014, 10, 2963–2974, doi:10.3762/bjoc.10.314

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  • Organics, Geel, Belgium; 4, 6: Fluka Chemie AG, Buchs, Switzerland). The [2.2.2]heptamethine cyanine dyes 1a–e [22], bis-quinolinium 3 [39] and tetraazoniahetarene 5 [23] were synthesized according to published procedures. Oligodeoxyribonucleotides (HPLC purified) a2 [d(ACAG4TGTG4ACAG4TGTG4)] and Fa2T [d
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Published 11 Dec 2014

Solution phase synthesis of short oligoribonucleotides on a precipitative tetrapodal support

  • Alejandro Gimenez Molina,
  • Amit M. Jabgunde,
  • Pasi Virta and
  • Harri Lönnberg

Beilstein J. Org. Chem. 2014, 10, 2279–2285, doi:10.3762/bjoc.10.237

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  • them has so far been applied to the synthesis of RNA. Tetrakis(4-azidomethylphenyl)pentaerythritol has recently been introduced as a practical soluble support for the synthesis of short oligodeoxyribonucleotides [16]. The 3'-terminal nucleoside is attached as a 3'-O-(4-pentynoyl) derivative to the
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Published 29 Sep 2014
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