Carbonylative synthesis and functionalization of indoles

• Alex De Salvo,
• Raffaella Mancuso and
• Xiao-Feng Wu

Beilstein J. Org. Chem. 2024, 20, 973–1000, doi:10.3762/bjoc.20.87

• hexaketocyclohexane octahydrate as the CO source again. This cyclic hexaketone is a non-toxic stable solid and therefore, it is simple and safe to use unlike of carbon monoxide. It was used as reagent to obtain indol-α-ketoesters by the Cu-catalyzed direct double-carbonylation of indoles and alcohols [76]. The

• catalysts. Therefore, Wu’s group developed the direct C–H aminocarbonylation of indoles by using cheaper Co(OAc)2·4H2O as catalyst [80] which allowed the reaction to proceed well when used in conjunction of Ag2CO3 as oxidant and a further addition of PivONa as additive. The presence of CO as reagent was

Direct synthesis of acyl fluorides from carboxylic acids using benzothiazolium reagents

• Lilian M. Maas,
• Alex Haswell,
• Rory Hughes and
• Matthew N. Hopkinson

Beilstein J. Org. Chem. 2024, 20, 921–930, doi:10.3762/bjoc.20.82

• Kingdom 10.3762/bjoc.20.82 Abstract 2-(Trifluoromethylthio)benzothiazolium triflate (BT-SCF3) was used as deoxyfluorinating reagent for the synthesis of versatile acyl fluorides directly from the corresponding carboxylic acids. These acyl fluorides were reacted with amines in a one-pot protocol to form

• different amides, including dipeptides, under mild and operationally simple conditions in high yields. Mechanistic studies suggest that BT-SCF3 can generate acyl fluorides from carboxylic acids via two distinct pathways, which allows the deoxyfluorinating reagent to be employed in sub-stoichiometric amounts

• to deliver acyl fluorides via two distinct deoxyfluorination pathways, an efficient process could be achieved using only sub-stoichiometric amounts of the fluorinating reagent. Results and Discussion In an initial test reaction, 4-methylbenzoic acid (1a) was reacted with 1.25 equiv of BT-SCF3 and 2.0

One-pot Ugi-azide and Heck reactions for the synthesis of heterocyclic systems containing tetrazole and 1,2,3,4-tetrahydroisoquinoline

• Jiawei Niu,
• Yuhui Wang,
• Shenghu Yan,
• Yue Zhang,
• Xiaoming Ma,
• Qiang Zhang and
• Wei Zhang

Beilstein J. Org. Chem. 2024, 20, 912–920, doi:10.3762/bjoc.20.81

• highly diverse peptidic structures A with up to four points of substitution (Scheme 1) [26][27]. By replacing the carboxylic acid with a nucleophilic azide reagent XN3 (generally TMSN3), the Ugi-azide four-component reaction (UA-4CR) of an aldehyde, amine, isocyanide, and azide gives 1,5-disubstituted 1H

Three-component N-alkenylation of azoles with alkynes and iodine(III) electrophile: synthesis of multisubstituted N-vinylazoles

• Jun Kikuchi,
• Roi Nakajima and
• Naohiko Yoshikai

Beilstein J. Org. Chem. 2024, 20, 891–897, doi:10.3762/bjoc.20.79

• ). Observing no byproducts originating from phenylacetylene, we speculate that the lack of reactivity stems from the relatively low electron density of the terminal alkyne, which likely leads to direct coordination of pyrazole to the iodine(III) reagent. To probe the relative reactivity of different azoles

(Bio)isosteres of ortho- and meta-substituted benzenes

• H. Erik Diepers and
• Johannes C. L. Walker

Beilstein J. Org. Chem. 2024, 20, 859–890, doi:10.3762/bjoc.20.78

• and aldehyde protecting groups. Recently, Lebold, Sarpong, and co-workers showed that 1,2-BCPs (±)-14a–e are also accessible from 1,5-disubstituted 2-azabicyclo[2.1.1]hexanes 13 (2-aza-1,5-BCHs) through a skeletal editing strategy utilising commercially available Levin’s reagent [30][31] (Scheme 1D

• ). Reaction with a Grignard reagent, hydroboration and oxidation of the organoborane were also possible in high yields (to 188). Similar to ketoprofen bioisostere 189, its inversely substituted isomer iso-189 was also accessible from 185a. Iwabuchi and co-workers also investigated the biological activity of

Confirmation of the stereochemistry of spiroviolene

• Yao Kong,
• Yuanning Liu,
• Kaibiao Wang,
• Tao Wang,
• Chen Wang,
• Ben Ai,
• Hongli Jia,
• Guohui Pan,
• Min Yin and
• Zhengren Xu

Beilstein J. Org. Chem. 2024, 20, 852–858, doi:10.3762/bjoc.20.77

• , respectively. The formation of all three products 9–11 can be explained as follows (Scheme 2A) [28][29][30][31]: Due to the favorable formation of cis-5,5-fused B/C ring system, the borane reagent is preferred to approach the double bond of 1 from the α-face, to give either a secondary 1-organoborane

Activity assays of NnlA homologs suggest the natural product N-nitroglycine is degraded by diverse bacteria

• Kara A. Strickland,
• Brenda Martinez Rodriguez,
• Ashley A. Holland,
• Shelby Wagner,
• Michelle Luna-Alva,
• David E. Graham and
• Jonathan D. Caranto

Beilstein J. Org. Chem. 2024, 20, 830–840, doi:10.3762/bjoc.20.75

• instructions. Nitrite concentrations were determined by reacting 25 μL aliquots of reaction sample with 25 μL of deoxygenated Griess reagent R1 (1% sulfanilamide in 5% H3PO4) followed by addition of 25 μL of deoxygenated Griess reagent R2 (0.1% naphthylethylenediamine dihydrochloride in water). The absorbance

Advancements in hydrochlorination of alkenes

• Daniel S. Müller

Beilstein J. Org. Chem. 2024, 20, 787–814, doi:10.3762/bjoc.20.72

• hydrochlorination products in acceptable yields but that trimethylchlorosilane (TMSCl) was generally the most useful reagent (Scheme 9). The reactions were typically conducted at room temperature, as elevated temperatures led to a decrease in yield, and lower temperatures were prohibited by the freezing temperature

• acetic acid as a mild hydrochlorination reagent (Table 8) [72]. Notably, the addition of acetic acid substantially enhanced the yield of chloride 109 (Table 8, entry 3). The functional group tolerance of the reaction appears to be similar to the one reported by Snyder [69] (compare Scheme 17 and Scheme

• noteworthy that Tanemura demonstrated that hydrochloric acid in the absence of silica gel gives only very sluggish reactions (Scheme 21B). This is probably the reason why hydrochloric acid was ignored as a reagent for hydrochlorination reactions for more than a century. Most recently, our group revisited the

Synthesis and characterization of water-soluble C₆₀–peptide conjugates

• Yue Ma,
• Lorenzo Persi and
• Yoko Yamakoshi

Beilstein J. Org. Chem. 2024, 20, 777–786, doi:10.3762/bjoc.20.71

• a similar peptide (GABA-(Lys)5-peptide-PEG) on resin for the reaction with compound 3. Initial trials, using 2-(1H-7-azabenzotriazol-1-yl)-1,1,3,3-tetramethyluronium hexafluorophosphate (HATU) and N-methylmorpholine (NMM), respectively, as a coupling reagent and a base, and 5 equiv of peptide on

• (32%) when HBTU was used as a coupling reagent. Finally, use of a greater excess (6.0 equiv) of peptide on resin relative to 3, and a combination of HBTU and DIPEA as the coupling reagent and base, provided the C60–peptide conjugate in an isolated yield of 41% (based on the used compound 3). The yield

• measured by the ESR spin trapping method under irradiation of visible light (527 nm green LED). 4-Oxo-TEMP was used as a spin trapping reagent to form an adduct with 1O2, i.e., 4-oxo-TEMPO, which was observed by ESR (Figure 7b). As shown in Figure 7a, upon visible light irradiation, three peaks

SOMOphilic alkyne vs radical-polar crossover approaches: The full story of the azido-alkynylation of alkenes

• Julien Borrel and
• Jerome Waser

Beilstein J. Org. Chem. 2024, 20, 701–713, doi:10.3762/bjoc.20.64

• iodine reagents [15][16]. Azidobenziodoxolone, also known as Zhdankin reagent, has often been used under thermal or photochemical conditions to generate the desired azide radical in a controlled fashion. However, recent safety issues arising from the shock and impact sensitivity of the compound led to

• the development of the azidobenziodazolone scaffold [17]. This class of derivative showed an improved safety profile while retaining the redox properties of the original reagent. A single example of azido-alkynylation has been reported by Ramasastry and co-workers during a mechanistic study for an

• as raw data in our previous work [45]. Results and Discussion SOMOphilic alkynes We started to investigate the azido-alkynylation of styrene (1a) using EBX reagent 2 as SOMOphilic alkyne (Table 1). Tosyl-azidobenziodazolone (Ts-ABZ, 3), previously developed by our group [17], was selected as an azide

A laterally-fused N-heterocyclic carbene framework from polysubstituted aminoimidazo[5,1-b]oxazol-6-ium salts

• Andrew D. Gillie,
• Matthew G. Wakeling,
• Bethan L. Greene,
• Louise Male and
• Paul W. Davies

Beilstein J. Org. Chem. 2024, 20, 621–627, doi:10.3762/bjoc.20.54

• Andrew D. Gillie Matthew G. Wakeling Bethan L. Greene Louise Male Paul W. Davies School of Chemistry, University of Birmingham, Birmingham, B15 2TT, UK 10.3762/bjoc.20.54 Abstract A polysubstituted 3-aminoimidazo[5,1-b]oxazol-6-ium framework has been accessed from a new nitrenoid reagent by a two

• incorporating the unsaturated oxazole counterparts has not been explored. Results and Discussion Reaction of ynamide 1a with the N-acylpyridinium-N-aminide reagent 2 proceeded in good yield to afford oxazole 3 bearing a C-2 methyleneamino moiety as the first example of a free secondary amine in this annulation

• good yield. The new nitrenoid reagent 7 is readily prepared from 2,6-diisopropylphenylamine in three steps. Alkylation with methyl bromoacetate is followed by formylation of 11 and then substitution [21] of 12 with N-aminopyridinium iodide to yield the bench-stable and crystalline N-acylpyridinium

Entry to new spiroheterocycles via tandem Rh(II)-catalyzed O–H insertion/base-promoted cyclization involving diazoarylidene succinimides

• Alexander Yanovich,
• Anastasia Vepreva,
• Ksenia Malkova,
• Grigory Kantin and
• Dmitry Dar’in

Beilstein J. Org. Chem. 2024, 20, 561–569, doi:10.3762/bjoc.20.48

• approach using propiolic acids [39]. The diazo reagent 1a was introduced in the Rh2(esp)2-catalyzed insertion into the O–H bond of phenylpropropiolic acid (9а) to form the intermediate compound 10a (Scheme 2). The cyclization of the latter was carried out in DCM solution under the action of DIPEA (30 mol

• structure of product 3b has been confirmed by crystallographic data. An approach to the construction of the THF cycle using a diazo reagent and 3-bromopropan-1-ol (13) [41] or similar halogenated OH substrates [42] has already been demonstrated in the literature using selected examples. We first validate

• reaction products using diazo reagent 1b as an example, but we failed to observe the formation of spirocyclic cyclization products as a result of intramolecular substitution of the bromine atom (Scheme 7). For example, during the attempted cyclization of compound 18, obtained from 2-(bromomethyl)benzoic

Synthesis and biological profile of 2,3-dihydro[1,3]thiazolo[4,5-b]pyridines, a novel class of acyl-ACP thioesterase inhibitors

• Jens Frackenpohl,
• David M. Barber,
• Guido Bojack,
• Birgit Bollenbach-Wahl,
• Ralf Braun,
• Rahel Getachew,
• Sabine Hohmann,
• Kwang-Yoon Ko,
• Karoline Kurowski,
• Bernd Laber,
• Rebecca L. Mattison,
• Thomas Müller,
• Anna M. Reingruber,
• Dirk Schmutzler and
• Andrea Svejda

Beilstein J. Org. Chem. 2024, 20, 540–551, doi:10.3762/bjoc.20.46

• ]pyridine (13c, 54% combined isolated yield). As shown for N-acylated target compounds 16a–f, the acylation of 6-bromo-2,3-dihydro[1,3]thiazolo[4,5-b]pyridines 13a–c, affording target compounds 14a–c, proceeded under mild conditions with a suitable acyl chloride reagent and triethylamine as base in DCM. It

Ligand effects, solvent cooperation, and large kinetic solvent deuterium isotope effects in gold(I)-catalyzed intramolecular alkene hydroamination

• Ruichen Lan,
• Brock Yager,
• Yoonsun Jee,
• Cynthia S. Day and
• Amanda C. Jones

Beilstein J. Org. Chem. 2024, 20, 479–496, doi:10.3762/bjoc.20.43

• -workers, it was found that in chlorination reactions, activation of alkenes is not driven by the electrophilicity of the reagent being attacked by an alkene, but instead depends on nucleophile assistance: the alkene becomes more nucleophilic upon interaction with the pendant attacking nucleophile [81]. In

Synthesis of 2,2-difluoro-1,3-diketone and 2,2-difluoro-1,3-ketoester derivatives using fluorine gas

• Alexander S. Hampton,
• David R. W. Hodgson,
• Graham McDougald,
• Linhua Wang and
• Graham Sandford

Beilstein J. Org. Chem. 2024, 20, 460–469, doi:10.3762/bjoc.20.41

• , but the second fluorination step occurs only after reaction for several days. In the solid phase, mechanical milling of the diketone substrate with solid Selectfluor in the presence of sodium carbonate [13][14], and reaction of ketones with a strong base and an N–F reagent give rise to the

• enolization of the monofluoro-diketone intermediates. In addition, imines and α-diboryl ketone derivatives can also be transformed to 2,2-difluoroketones using an N–F electrophilic fluorinating reagent [18]. Alternatively, building blocks containing CF2 units such as ethyl bromodifluoroacetate and

• , electrophilic reagent to be important. Given the structural similarity of 1,4-diazabicyclo[2.2.2]octane (DABCO) to the Selectfluor system, a 10% v/v mixture of fluorine in nitrogen was passed through a solution of 1a in acetonitrile containing one equivalent of DABCO, using a fluorination apparatus and gas flow

(E,Z)-1,1,1,4,4,4-Hexafluorobut-2-enes: hydrofluoroolefins halogenation/dehydrohalogenation cascade to reach new fluorinated allene

• Nataliia V. Kirij,
• Andrey A. Filatov,
• Yurii L. Yagupolskii,
• Sheng Peng and
• Lee Sprague

Beilstein J. Org. Chem. 2024, 20, 452–459, doi:10.3762/bjoc.20.40

• compound, but led to the elimination of two fluorine atoms with the formation of 1,1,4,4-tetrafluorobuta-1,3-diene [9]. It was also shown that the reactions of the boron reagent (CAACMe)BH2Li(thf)3 with hydrofluoroolefins, including (Z)-1,1,1,4,4,4-hexafluorobut-2-ene, results in defluoroborylation to form

• continues to be relevant. One of the methods for the synthesis of allenes was based on the interaction of bromoolefins with organolithium compounds, followed by the elimination of lithium fluoride [29][30][31]. It was logical to assume that in our case a similar reaction of the Grignard reagent 12 with

• aldehyde 9, elimination of MgBrF results in the formation of allene 11. To confirm our hypothesis, we studied the reaction of haloolefins 3 and 7 with iPrMgCl and BuLi. Thus, olefin 3a in Et2O reacted with iPrMgCl solution in THF at −80 °C to form Grignard reagent 12 and by heating the reaction mixture to

Green and sustainable approaches for the Friedel–Crafts reaction between aldehydes and indoles

• Periklis X. Kolagkis,
• Eirini M. Galathri and
• Christoforos G. Kokotos

Beilstein J. Org. Chem. 2024, 20, 379–426, doi:10.3762/bjoc.20.36

• mentioning that Hojati et al., in 2013, developed a simple, novel and efficient procedure for the synthesis of BIMs, utilizing 1,3-dibromo-5,5-dimethylhydantoin (DBDMH) as the catalyst (Scheme 3). DBDMH is an N-halo-reagent, which has found widespread applications in industrial processes, due to its economic

Discovery of unguisin J, a new cyclic peptide from Aspergillus heteromorphus CBS 117.55, and phylogeny-based bioinformatic analysis of UngA NRPS domains

• Sharmila Neupane,
• Marcelo Rodrigues de Amorim and
• Elizabeth Skellam

Beilstein J. Org. Chem. 2024, 20, 321–330, doi:10.3762/bjoc.20.32

• was evaporated under nitrogen gas flow. The residue was dissolved in 0.5 mL of H2O, and dried using speedvac to remove the residual HCl. The hydrolysates of 1 and 2 as well as authentic amino acid samples were treated with 200 μL of 1 N sodium bicarbonate solution and 100 μL of 1% Marfey’s reagent (Nα

Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin

• Jon Lundstrøm,
• Emilie Gillon,
• Valérie Chazalet,
• Nicole Kerekes,
• Antonio Di Maio,
• Ten Feizi,
• Yan Liu,
• Annabelle Varrot and
• Daniel Bojar

Beilstein J. Org. Chem. 2024, 20, 306–320, doi:10.3762/bjoc.20.31

• instrument company) at 130 rpm in a Multitron 4 incubator (Infors) and transfected at 2 × 106 cells/mL using FectoPro transfection reagent (Polyplus). Protein-containing culture supernatant (0.8 L) was harvested after 120 h, filtered using Polydisc AS 0.45 μm (Whatman, Cytiva) and loaded onto a 5 mL HisExcel

Synthesis of π-conjugated polycyclic compounds by late-stage extrusion of chalcogen fragments

• Aissam Okba,
• Pablo Simón Marqués,
• Kyohei Matsuo,
• Naoki Aratani,
• Hiroko Yamada,
• Gwénaël Rapenne and
• Claire Kammerer

Beilstein J. Org. Chem. 2024, 20, 287–305, doi:10.3762/bjoc.20.30

• reactivity in the absence of external reagent (i.e., their photo- and thermal reactivity) has been far less explored than for heteropines. Nowadays, the most common protocol to trigger extrusion from 1,2-dichalcogenins and generate S- and Se-doped π-CPCs still relies on copper (as nanopowder) at high

Additive-controlled chemoselective inter-/intramolecular hydroamination via electrochemical PCET process

• Kazuhiro Okamoto,
• Naoki Shida and
• Mahito Atobe

Beilstein J. Org. Chem. 2024, 20, 264–271, doi:10.3762/bjoc.20.27

• electron-transfer to give the corresponding radical species through oxidative X–H bond cleavage. One such species is the amidyl radical, which is broadly synthetically useful as a nitrogen source in hydroamination reactions and as a hydrogen atom transfer (HAT) reagent for remote C–H activation [2][3][4][5

Nucleophilic functionalization of thianthrenium salts under basic conditions

• Xinting Fan,
• Duo Zhang,
• Xiangchuan Xiu,
• Bin Xu,
• Yu Yuan,
• Feng Chen and
• Pan Gao

Beilstein J. Org. Chem. 2024, 20, 257–263, doi:10.3762/bjoc.20.26

• % yield (Scheme 4). This operationally simple protocol enables the rapid development of novel thioetherification reactions using bench-stable alkylthianthrenium salts as the electrophiles. As is well known, alkyl trifluoromethanesulfonate (alkyl-OTf), serving as a potent electrophilic reagent, can also

Copper-catalyzed multicomponent reaction of β-trifluoromethyl β-diazo esters enabling the synthesis of β-trifluoromethyl N,N-diacyl-β-amino esters

• Youlong Du,
• Haibo Mei,
• Ata Makarem,
• Ramin Javahershenas,
• Vadim A. Soloshonok and
• Jianlin Han

Beilstein J. Org. Chem. 2024, 20, 212–219, doi:10.3762/bjoc.20.21

• side reactions was carried out with benzyl 3-amino-4,4,4-trifluorobutanoate (1a) and benzoic acid (3a) as model substrates. The initial reaction of amine 1a and acid 3a in acetonitrile in the presence of diazotization reagent tert-butyl nitrite with CuI (10 mol %) as catalysts for 2.5 h at room

Metal-catalyzed coupling/carbonylative cyclizations for accessing dibenzodiazepinones: an expedient route to clozapine and other drugs

• Amina Moutayakine and
• Anthony J. Burke

Beilstein J. Org. Chem. 2024, 20, 193–204, doi:10.3762/bjoc.20.19

• effective ligand in a variety of highly efficient aminocarbonylation reactions with Mo(CO)6 due to its strong basicity and accelerated release of CO from this reagent [21]. The reaction was then screened using two different bidentate ligands, XPhos and XantPhos, and using the previous reaction conditions

• reactions described in Table 1, involving Mo(CO)6 were 20 °C higher than the reactions described in Table 2 and/or (b) Mo(CO)6 acts as a co-catalyst. An investigative study was thus undertaken to elucidate the effect of the molybdenum reagent on the reaction using a simple model system consisting of aniline

• and bromobenzene (see Figure S1 and Table S1 in Supporting Information File 1). The experimental design was limited, in that we only monitored the reaction over a 90 min period. Contrary to what was originally believed the reaction without the Mo reagent gave better results during the first 90 min

Synthesis of the 3’-O-sulfated TF antigen with a TEG-N₃ linker for glycodendrimersomes preparation to study lectin binding

• Mark Reihill,
• Hanyue Ma,
• Dennis Bengtsson and
• Stefan Oscarson

Beilstein J. Org. Chem. 2024, 20, 173–180, doi:10.3762/bjoc.20.17

• in formation of a homogenous solution, but still no conversion to the sulfated product, even when the temperature was raised to 80 °C [28][29]. Switching the sulfating reagent to SO3·Py or performing the reaction at 150 °C in a microwave did not improve the outcome [30][31]. Since there was no