Perspectives on push–pull chromophores derived from click-type [2 + 2] cycloaddition–retroelectrocyclization reactions of electron-rich alkynes and electron-deficient alkenes

• Michio Yamada

Beilstein J. Org. Chem. 2024, 20, 125–154, doi:10.3762/bjoc.20.13

• charge-transfer complex AB. Subsequently, this complex forms a zwitterion intermediate (C1), followed by the formation of a cyclobutene intermediate (C2), ultimately forming the product P. However, the researchers strongly advocated for an alternative pathway, which entails the formation of a complex

Using the phospha-Michael reaction for making phosphonium phenolate zwitterions

• Matthias R. Steiner,
• Max Schmallegger,
• Larissa Donner,
• Johann A. Hlina,
• Christoph Marschner,
• Judith Baumgartner and
• Christian Slugovc

Beilstein J. Org. Chem. 2024, 20, 41–51, doi:10.3762/bjoc.20.6

• and exhibit a negative solvatochromism. An analysis of the kinetics of the zwitterion formation was performed for three Michael acceptors (acrylonitrile, methyl acrylate, and acrylamide) in two different solvents (chloroform and methanol). The results revealed the proton transfer step necessary to

• reactive in chloroform solution, while in methanol the corresponding phosphonium phenolate is formed. Keywords: Lewis-base catalysis; Michael acceptor reactivity; phospha-Michael reaction; phosphonium phenolate zwitterion; Introduction Organocatalysis has emerged in recent years as a valuable and

• the mentioned reactions, the first step of the catalytic cycle is the nucleophilic attack of the phosphine on the electrophile, in many cases an electron-deficient olefin. The zwitterion formed from this conjugate addition can subsequently act as a nucleophile or as a base [3][4][5]. The efficiency of

Aldiminium and 1,2,3-triazolium dithiocarboxylate zwitterions derived from cyclic (alkyl)(amino) and mesoionic carbenes

• Nedra Touj,
• François Mazars,
• Guillermo Zaragoza and
• Lionel Delaude

Beilstein J. Org. Chem. 2023, 19, 1947–1956, doi:10.3762/bjoc.19.145

• report described the preparation of a CAAC·CS2 zwitterion. Thus, in 2009 Bertrand et al. obtained the betaine 2 by reacting the free carbene 1 with a slight excess of CS2 in THF at room temperature (Scheme 1) [62]. The starting material that featured a bulky and rigid spirocyclic alkyl group derived from

• layered with petroleum ether or n-hexane and kept at −18 °C for a few weeks. This procedure successfully afforded single crystals of products 6b and 6e suitable for XRD analysis (Figure 4). Orange prisms of zwitterion 6b belonged to the monoclinic P21/n space group, while the dark red-brown blocks of

• ) with thermal ellipsoids drawn at the 50% probability level. ORTEP representations of zwitterions 6b (MIC-Dip-Ph-Me·CS2, top) and 6e (MIC-Mes-Bu-Me·CS2, bottom) with thermal ellipsoids drawn at the 50% probability level. Synthesis of CAAC·CS2 zwitterion 2 from its free carbene parent 1. Synthesis of

Unprecedented synthesis of a 14-membered hexaazamacrocycle

• Anastasia A. Fesenko and
• Anatoly D. Shutalev

Beilstein J. Org. Chem. 2023, 19, 1728–1740, doi:10.3762/bjoc.19.126

• the most electrophilic C2 carbon of the pyrimidine ring in 8 to give intermediate A. Cleavage of the C2–N3 bond in the latter followed by proton transfer in the formed zwitterion B affords bis-amidrazone C. Next, two molecules of bis-amidrazone C react with each other forming adduct D, which either

N-Sulfenylsuccinimide/phthalimide: an alternative sulfenylating reagent in organic transformations

• Fatemeh Doraghi,
• Seyedeh Pegah Aledavoud,
• Mehdi Ghanbarlou,
• Bagher Larijani and
• Mohammad Mahdavi

Beilstein J. Org. Chem. 2023, 19, 1471–1502, doi:10.3762/bjoc.19.106

• , chalcogensuccinimide as an electrophile, and cyclopropane as a zwitterion component (Scheme 21) [58]. In 2020, a Lewis acid-mediated cyclization of β,γ-unsaturated oximes 51 and hydrazones 52 with N-(arylsulfenyl)succinimide 1 and N-(arylseleno)succinimide 1’’ was extended for the formation of isoxazoles 53 and

Application of N-heterocyclic carbene–Cu(I) complexes as catalysts in organic synthesis: a review

• Nosheen Beig,
• Varsha Goyal and
• Raj K. Bansal

Beilstein J. Org. Chem. 2023, 19, 1408–1442, doi:10.3762/bjoc.19.102

Synthesis of ether lipids: natural compounds and analogues

• Marco Antônio G. B. Gomes,
• Alicia Bauduin,
• Chloé Le Roux,
• Romain Fouinneteau,
• Wilfried Berthe,
• Mathieu Berchel,
• Hélène Couthon and
• Paul-Alain Jaffrès

Beilstein J. Org. Chem. 2023, 19, 1299–1369, doi:10.3762/bjoc.19.96

Exploring the role of halogen bonding in iodonium ylides: insights into unexpected reactivity and reaction control

• Carlee A. Montgomery and
• Graham K. Murphy

Beilstein J. Org. Chem. 2023, 19, 1171–1190, doi:10.3762/bjoc.19.86

• previously proposed for hypervalent iodine compounds [9][117][118][119], Moriarty proposed a carbene-free mechanism for the formation of 11 [113]. In this, the nucleophilic olefin first attacked the electrophilic iodine center to form zwitterion 15, which closed to produce iodocycle 16 and then underwent

Group 13 exchange and transborylation in catalysis

• Dominic R. Willcox and
• Stephen P. Thomas

Beilstein J. Org. Chem. 2023, 19, 325–348, doi:10.3762/bjoc.19.28

• frustrated Lewis pair (FLP)-mediated C‒H functionalisation (Scheme 4a). Using computational analysis, the mechanism of the reaction was proposed to occur by borane dimer [9]2 dissociation, followed by a concerted deprotonation of the heterocycle 10 to give a zwitterionic intermediate 11. The zwitterion then

• borylation of thiols with HBpin (Scheme 17) [79]. Through computational analysis, a mechanism was proposed whereby the ambiphilic amine-borane 73 underwent concerted addition to the thiol 74 S–H bond, to give a zwitterion 75. After loss of H2, a neutral thioborane 76 was generated, which underwent B‒S/B‒H

• give a zwitterion 84. Loss of dihydrogen gave an alkynylaluminium species 85 which underwent Al‒C/B‒H exchange with HBpin to give an alkynylboronic ester 86 and regenerate the catalyst 83 (Scheme 21). Roesky reported the first example of Al‒N/B‒H exchange in catalysis: a NacNac-supported aluminium

Tri(n-butyl)phosphine-promoted domino reaction for the efficient construction of spiro[cyclohexane-1,3'-indolines] and spiro[indoline-3,2'-furan-3',3''-indolines]

• Hui Zheng,
• Ying Han,
• Jing Sun and
• Chao-Guo Yan

Beilstein J. Org. Chem. 2022, 18, 669–679, doi:10.3762/bjoc.18.68

• reaction, the nucleophilic addition of the zwitterion (A) to this compound takes place at the exocyclic position giving the adduct (E), which in turn proceeds with the intermediates (F) and (G) according to the above mentioned similar processes to give the spiro compound 5. The different addition direction

• of the zwitterion A to the isatylidene malononitrile 2 and 3-(ethoxycarbonylmethylene)oxindole 4 results in the different regioselectivity in the formation of the spiro compounds 3 and 5. For further demonstrate the synthetic value of this procedure, ethyl isatylidene cyanoacetates 6 were also

Cs₂CO₃-Promoted reaction of tertiary bromopropargylic alcohols and phenols in DMF: a novel approach to α-phenoxyketones

• Ol'ga G. Volostnykh,
• Olesya A. Shemyakina,
• Anton V. Stepanov and
• Igor' A. Ushakov

Beilstein J. Org. Chem. 2022, 18, 420–428, doi:10.3762/bjoc.18.44

• leading to intermediate A, nucleophilic attack of phenolate at the less sterically hindered carbon of the above zwitterion A and subsequent protonation of anion B (Scheme 8). Based on these plausible mechanisms for the formation of phenoxyketones, it can be assumed that a decline of the Cs+ concentration

Chemical syntheses and salient features of azulene-containing homo- and copolymers

• Vijayendra S. Shetti

Beilstein J. Org. Chem. 2021, 17, 2164–2185, doi:10.3762/bjoc.17.139

• the polymer backbone. The iminium zwitterion resonance structure (Figure 2) can contribute in extending the conjugation along the backbone of poly[2(6)-aminoazulene] 31 and this property of 31 makes it very different from the well-known polyaniline. The absorption peak positions of the protonated

Electron-rich triarylphosphines as nucleophilic catalysts for oxa-Michael reactions

• Susanne M. Fischer,
• Simon Renner,
• A. Daniel Boese and
• Christian Slugovc

Beilstein J. Org. Chem. 2021, 17, 1689–1697, doi:10.3762/bjoc.17.117

• to an activated electrophile, e.g., an electron-deficient olefin, generating a zwitterion (i, Scheme 1). In further course, the zwitterion acts as a nucleophile or as a base [1]. The efficiency of the formation of this β-phosphonium α-carbanionic species depends on the nucleophilicity of the

• -Michael addition. Triphenylphosphine (TPP), (4-methoxyphenyl)diphenylphosphine (MMTPP) and tris(4-trimethoxyphenyl)phosphine (TMTPP). The catalysts were investigated in the reaction of four different Michael acceptors with four different alcohols. In the oxa-Michael addition, the zwitterion i, initially

• calculated to be as low as −6.10 eV, it is obvious that also this approach fails in sufficiently describing the activity of phosphines in catalyzing oxa-Michael reactions. To resolve this issue, the Gibbs free energy (ΔG) of the reaction of TPP, MMTPP, TMTPP, and PMe3 with acrylonitrile leading to zwitterion

A new glance at the chemosphere of macroalgal–bacterial interactions: In situ profiling of metabolites in symbiosis by mass spectrometry

• Marine Vallet,
• Filip Kaftan,
• Veit Grabe,
• Fatemeh Ghaderiardakani,
• Simona Fenizia,
• Aleš Svatoš,
• Georg Pohnert and
• Thomas Wichard

Beilstein J. Org. Chem. 2021, 17, 1313–1322, doi:10.3762/bjoc.17.91

• zwitterion dimethylsulphoniopropionate (DMSP), resulting in biofilm formation on the algal surrounding [9]. The bacterium subsequently uses the provided glycerol for growth and transforms DMSP into methanethiol and dimethyl sulphide [9]. The metabolic activities of marine bacteria and algae can be surveyed

Multiswitchable photoacid–hydroxyflavylium–polyelectrolyte nano-assemblies

• Alexander Zika and
• Franziska Gröhn

Beilstein J. Org. Chem. 2021, 17, 166–185, doi:10.3762/bjoc.17.17

• applied in aqueous solution, with the Schmuck binding motif – the guanidiniocarbonyl‐pyrrole zwitterion binding motif – representing a most versatile binding motif with potential from nanostructure design to biomedicine [22][23][24][25]. In addition, it is desirable to establish general concepts that do

Supramolecular polymers with reversed viscosity/temperature profile for application in motor oils

• Jan-Erik Ostwaldt,
• Christoph Hirschhäuser,
• Stefan K. Maier,
• Carsten Schmuck and
• Jochen Niemeyer

Beilstein J. Org. Chem. 2021, 17, 105–114, doi:10.3762/bjoc.17.11

• VII system requires a BU with strong dimerization tendency and a LU with precoordinating properties. For our purpose, we initially employed the guanidiniocarbonyl pyrrole (GCP) motif as a binding unit [19]. The GCP unit is a self-complementary zwitterion, which forms dimers with high association

All-carbon [3 + 2] cycloaddition in natural product synthesis

• Zhuo Wang and
• Junyang Liu

Beilstein J. Org. Chem. 2020, 16, 3015–3031, doi:10.3762/bjoc.16.251

• rationalized by the proposed catalytic mechanism (Scheme 7B). The phosphine (i.e., PR3, A) attacks the allene 101 to generate zwitterion intermediate B, which is subjected to a less hindered attack by the isoindigo 100. The oxindole bearing a chlorine atom on isoindigo 100 makes C-3 more electron deficient

• carbene complex intermediate and a mechanism was proposed (Scheme 10B). An nucleophilic attack of the amine nitrogen onto the alkyne 139 under the effect of activated Pt(II) A produces zwitterionic intermediate B. Elimination of the methoxy group from zwitterion B generates the α,β-unsaturated carbene

UV resonance Raman spectroscopy of the supramolecular ligand guanidiniocarbonyl indole (GCI) with 244 nm laser excitation

• Tim Holtum,
• Vikas Kumar,
• Daniel Sebena,
• Jens Voskuhl and
• Sebastian Schlücker

Beilstein J. Org. Chem. 2020, 16, 2911–2919, doi:10.3762/bjoc.16.240

• strong dimerization based on zwitterion formation at neutral pH, as described for GCP (Kdim >102 in water) [29] as well as for a GCI derivative [30], which would interfere with the anion binding. Solid benzoic acid and RGD were purchased from Fluka Analytical and Sigma-Aldrich, respectively. Both

Synthesis of purines and adenines containing the hexafluoroisopropyl group

• Viacheslav Petrov,
• Rebecca J. Dooley,
• Alexander A. Marchione,
• Elizabeth L. Diaz,
• Brittany S. Clem and
• William Marshall

Beilstein J. Org. Chem. 2020, 16, 2739–2748, doi:10.3762/bjoc.16.224

• HFTA and imidazole. In this case, the reaction can proceed through the attack of a nitrogen atom of the imidazole ring at the carbon atom of the C=S bond, leading to the formation of the zwitterion B (Scheme 6). The transfer of a proton from the nitrogen atom to the sulfur atom leads to the formation

One-pot synthesis of oxazolidinones and five-membered cyclic carbonates from epoxides and chlorosulfonyl isocyanate: theoretical evidence for an asynchronous concerted pathway

• Esra Demir,
• Ozlem Sari,
• Yasin Çetinkaya,
• Ufuk Atmaca,
• Safiye Sağ Erdem and
• Murat Çelik

Beilstein J. Org. Chem. 2020, 16, 1805–1819, doi:10.3762/bjoc.16.148

• strained intermediate gives rise to a short-lived carbonium ion which will be attacked by the nucleophilic part of the zwitterion in a concerted way (Scheme 2a). De Meijere and co-workers [42] proposed a mechanism involving a 1,5-dipolar intermediate (Scheme 2b). To the best of our knowledge, there is no

Small anion-assisted electrochemical potential splitting in a new series of bistriarylamine derivatives: organic mixed valency across a urea bridge and zwitterionization

• Keishiro Tahara,
• Tetsufumi Nakakita,
• Alyona A. Starikova,
• Takashi Ikeda,
• Masaaki Abe and
• Jun-ichi Kikuchi

Beilstein J. Org. Chem. 2019, 15, 2277–2286, doi:10.3762/bjoc.15.220

• binding strength to PF6−, suggesting an involvement of the 1+–PF6− species during the electrochemical event of 1 described above. The comparison of DFT calculations between 1+ and 1+–PF6− revealed that upon zwitterion formation, the bound PF6− can increase the electronic interactions between the NAr3

Novel (2-amino-4-arylimidazolyl)propanoic acids and pyrrolo[1,2-c]imidazoles via the domino reactions of 2-amino-4-arylimidazoles with carbonyl and methylene active compounds

• Victoria V. Lipson,
• Tetiana L. Pavlovska,
• Nataliya V. Svetlichnaya,
• Anna A. Poryvai,
• Nikolay Yu. Gorobets,
• Erik V. Van der Eycken,
• Irina S. Konovalova,
• Svetlana V. Shiskina,
• Alexander V. Borisov,
• Vladimir I. Musatov and
• Alexander V. Mazepa

Beilstein J. Org. Chem. 2019, 15, 1032–1045, doi:10.3762/bjoc.15.101

• signals of the ABX protons of the propionyl fragment – СНХ at 4.60–4.30 ppm and СН2АВ at 3.00–2.60 ppm. Finally, the structure of acids 11 was confirmed by X-ray diffraction data of the sample compound 11b (Figure 4). Compound 11b was found to be a zwitterion and exists as monohydrate in the crystal phase

• 1.332(2) Å, the C1–N3 bond length is 1.337(3) Å and the N1–C1 bond length is 1.340(2) Å) allows to describe the zwitterion as superposition of three forms with different location of the positive charge (Scheme 3). Literatur data concerning pyrrolo[1,2-c]imidazol-5-ones is quite limited and the known 6,7

Selective formation of a zwitterion adduct and bicarbonate salt in the efficient CO₂ fixation by N-benzyl cyclic guanidine under dry and wet conditions

• Yoshiaki Yoshida,
• Naoto Aoyagi and
• Takeshi Endo

Beilstein J. Org. Chem. 2018, 14, 2204–2211, doi:10.3762/bjoc.14.194

• . In addition, the zwitterion adduct 2 and bicarbonate salt 3 were selectively prepared from 1 under dry (in anhydrous CH3CN) and wet (in CH3CN containing an equimolar amount of water for 1) conditions, respectively. Both compounds 2 and 3 were isolated as white solids and their structures were

• characterized in detail by elemental analysis, FTIR-ATR, solid-state NMR, TGA, and DFT calculation. These analytical results obviously revealed the formation of a zwitterion adduct and bicarbonate salt from N-benzyl cyclic guanidine and CO2. Especially, the zwitterion adduct of the monocyclic guanidine

• derivative and CO2 was isolated and characterized for the first time. Keywords: bicarbonate salt; carbon dioxide adsorption; cyclic guanidine; repeatable capture and release; zwitterion adduct; Introduction Recently, various reactions with CO2 as a cheap and green carbon reagent have been developed not

Phosphodiester models for cleavage of nucleic acids

• Satu Mikkola,
• Tuomas Lönnberg and
• Harri Lönnberg

Beilstein J. Org. Chem. 2018, 14, 803–837, doi:10.3762/bjoc.14.68

• , one order of magnitude faster than the cleavage of the zwitterion. This observation has led to the conclusion that the monoanion reacts through a minor tautomer having the 2´-OH deprotonated and the amino group protonated. The protonated amino group may facilitate the attack of the 2´-oxyanion by H

Rh(II)-mediated domino [4 + 1]-annulation of α-cyanothioacetamides using diazoesters: A new entry for the synthesis of multisubstituted thiophenes

• Jury J. Medvedev,
• Ilya V. Efimov,
• Yuri M. Shafran,
• Vitaliy V. Suslonov,
• Vasiliy A. Bakulev and
• Valerij A. Nikolaev

Beilstein J. Org. Chem. 2017, 13, 2569–2576, doi:10.3762/bjoc.13.253

• or 5. Principally, thiophenes 3 and 5 could be derived from the S-ylide B in a somewhat different way, as for instance: coordination E of cyano group in S-ylide with a rhodium catalyst [63] gives rise to zwitterion F with a negative charge located on the rhodium atom, followed by recovery of the