Molecular assemblies on surfaces: towards physical and electronic decoupling of organic molecules

• Sabine Maier and
• Meike Stöhr

Beilstein J. Nanotechnol. 2021, 12, 950–956, doi:10.3762/bjnano.12.71

• layer; molecular self-assembly; scanning probe microscopy; surface science; Over the past two decades, organic molecules adsorbed on atomically defined metal surfaces have been intensively studied to obtain an in-depth understanding of their self-assembly behavior, on-surface reactivity, as well as

• space. Molecular adsorption and self-assembly are significantly altered compared to metals due to an often weak interaction between organics and bulk insulators. In contrast to face-on adsorption on metals, a tilted and edge-on adsorption becomes possible for planar aromatic molecules on bulk insulators

• due to the lattice mismatch between 2D material and its substrate might serve as structural templates for molecular adsorption and self-assembly [79][80][81][82]. The electronic decoupling depends on the electronic properties of the 2D materials as they can be insulators, semiconductors, semimetals

Self-assembly of Eucalyptus gunnii wax tubules and pure ß-diketone on HOPG and glass

• Miriam Anna Huth,
• Axel Huth and
• Kerstin Koch

Beilstein J. Nanotechnol. 2021, 12, 939–949, doi:10.3762/bjnano.12.70

• that ß-diketone tubules are formed by self-assembly and confirmed that ß-diketone is the shape-determining component for this type of tubules. Keywords: ß-diketone tubules; eucalyptus; plant wax; recrystallization; self-assembly; Introduction The plant cuticle, which is the largest biological

• morphologies are formed by a self-assembly process. On artificial surfaces, waxes recrystallize in three-dimensional structures with similar morphology and related properties as on plant surfaces [14]. Additionally, recrystallization of isolated wax components revealed that usually the main compounds determine

• AFM images of real-time investigation of wax recrystallization on HOPG were captured 10 to 13 min after the evaporation of the solvent. The AFM examination of wax self-assembly on HOPG showed platelets (Figure 3) as seen in SEM analysis. In AFM micrographs, two types of platelets with varying sizes

The role of convolutional neural networks in scanning probe microscopy: a review

• Ido Azuri,
• Irit Rosenhek-Goldian,
• Neta Regev-Rudzki,
• Georg Fantner and
• Sidney R. Cohen

Beilstein J. Nanotechnol. 2021, 12, 878–901, doi:10.3762/bjnano.12.66

Comprehensive review on ultrasound-responsive theranostic nanomaterials: mechanisms, structures and medical applications

• Sepand Tehrani Fateh,
• Lida Moradi,
• Elmira Kohan,
• Michael R. Hamblin and
• Amin Shiralizadeh Dezfuli

Beilstein J. Nanotechnol. 2021, 12, 808–862, doi:10.3762/bjnano.12.64

Physical constraints lead to parallel evolution of micro- and nanostructures of animal adhesive pads: a review

• Thies H. Büscher and
• Stanislav N. Gorb

Beilstein J. Nanotechnol. 2021, 12, 725–743, doi:10.3762/bjnano.12.57

• in the AMS is high and different AMS types coexist in the same groups, the adaptation to the corresponding natural surfaces probably took place in a comparatively short period of time [163]. Using a mathematical model, the potential of self-assembly of the structures observed in the AMS of phasmids

On the stability of microwave-fabricated SERS substrates – chemical and morphological considerations

• Limin Wang,
• Aisha Adebola Womiloju,
• Christiane Höppener,
• Ulrich S. Schubert and
• Stephanie Hoeppener

Beilstein J. Nanotechnol. 2021, 12, 541–551, doi:10.3762/bjnano.12.44

• drop-coating and self-assembly procedures [20][21][22]. Alternatively, monolayers of nanoparticles can be formed directly on substrates by a microwave-assisted one-step fabrication process [23][24] on glass and silicon-based substrates with different shapes (e.g., on flat substrates as well as inside

• the Raman spectroscopic performance of the SERS substrates. After self-assembly of 4-ATP from an ethanolic solution, the substrates were carefully cleaned with ethanol to ensure a complete removal of molecules that were non-specifically attached to the surface. The formation of a monolayer is ensured

• by utilizing a thiol-functionalized test molecule to form a defined monomolecular dense layer of analyte on the surface. Additionally, 4-ATP only binds to silver nanoparticles and does not bind to the underlying glass substrate. The self-assembly time for 4-ATP solutions was kept short to avoid any

Colloidal particle aggregation: mechanism of assembly studied via constructal theory modeling

• Scott C. Bukosky,
• Sukrith Dev,
• Monica S. Allen and
• Jeffery W. Allen

Beilstein J. Nanotechnol. 2021, 12, 413–423, doi:10.3762/bjnano.12.33

• with respect to van der Waals and double layer interactions. Preliminary results show that the particle aggregation behavior depends on the initial lattice configuration and solvent properties. Ultimately, our model provides the first constructal framework for predicting the self-assembly of particles

• and could be expanded upon to fit a range of colloidal systems. Keywords: colloids; constructal law; DLVO theory; interparticle interactions; nanomaterials; self-assembly; tunable systems; Introduction Constructal theory has been used to describe a number of naturally evolving processes/phenomena

• increase in the coordination number. We should note that the results presented here assume the self-assembly of monodisperse spherical particles suspended in a monovalent salt solution arranged in a uniform starting configuration. Given the Brownian nature of colloidal particles, future simulations should

The impact of molecular tumor profiling on the design strategies for targeting myeloid leukemia and EGFR/CD44-positive solid tumors

• Nikola Geskovski,
• Nadica Matevska-Geshkovska,
• Simona Dimchevska Sazdovska,
• Marija Glavas Dodov,
• Kristina Mladenovska and
• Katerina Goracinova

Beilstein J. Nanotechnol. 2021, 12, 375–401, doi:10.3762/bjnano.12.31

Extended iron phthalocyanine islands self-assembled on a Ge(001):H surface

• Rafal Zuzak,
• Marek Szymonski and
• Szymon Godlewski

Beilstein J. Nanotechnol. 2021, 12, 232–241, doi:10.3762/bjnano.12.19

• Rafal Zuzak Marek Szymonski Szymon Godlewski Centre for Nanometer-Scale Science and Advanced Materials, NANOSAM, Faculty of Physics, Astronomy, and Applied Computer Science, Jagiellonian University, Łojasiewicza 11, PL 30-348 Kraków, Poland 10.3762/bjnano.12.19 Abstract Self-assembly of iron(II

• ; iron phthalocyanine (FePc); scanning tunneling microscopy; self-assembly; Introduction The development of molecular circuitry requires the preparation of nanostructures isolated from the influence of the underlying substrate. This is of crucial importance for atomic and single-molecule prototypes, but

• holds also for layered materials. Single-molecule prototypes or molecular nanostructures are often prepared on metals, which usually provide a sufficiently low diffusion barrier for efficient self-assembly and simultaneously allow for in-depth analysis through atomically precise tools from the family of

TiO_x/Pt₃Ti(111) surface-directed formation of electronically responsive supramolecular assemblies of tungsten oxide clusters

• Marco Moors,
• Yun An,
• Agnieszka Kuc and
• Kirill Yu. Monakhov

Beilstein J. Nanotechnol. 2021, 12, 203–212, doi:10.3762/bjnano.12.16

• ]. One possibility to achieve this is to create substrate surfaces, whose characteristics would give rise to the nanostructured metal-oxide self-assembly formation. Herein, we demonstrate the potential of this approach using thermal evaporation of WO3 powder under ultra-high vacuum (UHV) on ultrathin

A review on the green and sustainable synthesis of silver nanoparticles and one-dimensional silver nanostructures

• Sina Kaabipour and
• Shohreh Hemmati

Beilstein J. Nanotechnol. 2021, 12, 102–136, doi:10.3762/bjnano.12.9

Electrokinetic characterization of synthetic protein nanoparticles

• Daniel F. Quevedo,
• Cody J. Lentz,
• Adriana Coll de Peña,
• Yazmin Hernandez,
• Nahal Habibi,
• Rikako Miki,
• Joerg Lahann and
• Blanca H. Lapizco-Encinas

Beilstein J. Nanotechnol. 2020, 11, 1556–1567, doi:10.3762/bjnano.11.138

• for producing subcompartments within particles. By localizing proteins at the nanoscale, PNPs could be used to control the release and delivery of therapeutics, theragnostics, and enzymatic cascades [10]. Although previously developed methods to produce PNPs, such as coacervation, self-assembly, and

Optically and electrically driven nanoantennas

• Monika Fleischer,
• Dai Zhang and
• Alfred J. Meixner

Beilstein J. Nanotechnol. 2020, 11, 1542–1545, doi:10.3762/bjnano.11.136

• top-down approaches such as thin film deposition and nanopatterning, as well as bottom-up approaches such as chemical synthesis and self-assembly [38]. Gap sizes may range from a few tens of nanometers down to sub-nanometer tunnel junctions, where the classical description of the plasmonic behavior

• to a sharp tip is refined to a two-step procedure with high throughput. A self-assembly approach to create a dumbbell antenna consisting of a 40 nm and an 80 nm Au nanoparticle at a scanning tip is shown in [48] and applied for single molecule sensitivity imaging. The advantage of applying TERS for

Adsorption and self-assembly of porphyrins on ultrathin CoO films on Ir(100)

• Feifei Xiang,
• Tobias Schmitt,
• Marco Raschmann and
• M. Alexander Schneider

Beilstein J. Nanotechnol. 2020, 11, 1516–1524, doi:10.3762/bjnano.11.134

• films on Ir(100) by scanning tunneling microscopy (STM) and density functional theory (DFT). The two substrates differ greatly with respect to their structural and potential-energy landscape corrugation with immediate consequences for adsorption and self-assembly of the molecules studied. On both films

• , due to the rather flat potential landscape, molecular rotation is thermally activated, which effectively prevents self-assembly. The situation is different for 2H-TCNPP, which, due to the additional functional anchoring groups, does not self-assemble on the 1BL film but forms self-assembled compact

• islands on the 2BL film. The findings demonstrate the guiding effect of the cobalt oxide films of different thickness and the effect of functional surface anchoring. Keywords: adsorption energy; molecular rotors; porphyrins; self-assembly; transition metal oxides; Introduction Due to their variability

Self-assembly and spectroscopic fingerprints of photoactive pyrenyl tectons on hBN/Cu(111)

• Domenik M. Zimmermann,
• Knud Seufert,
• Luka Ðorđević,
• Tobias Hoh,
• Sushobhan Joshi,
• Tomas Marangoni,
• Davide Bonifazi and
• Willi Auwärter

Beilstein J. Nanotechnol. 2020, 11, 1470–1483, doi:10.3762/bjnano.11.130

• -like-disubstituted derivatives governed the self-assembly of the pyrenyl core on the nanostructured hBN support, affording dense-packed arrays and intricate porous networks featuring a kagome lattice. Keywords: electronic structure; hexagonal boron nitride; optical properties; pyrene; self-assembly

• electronic and optical properties of molecular tectons and the respective assemblies must be comprehensively characterized [3][4][5][6]. Diverse self-assembly protocols have been extensively explored on metal substrates, and organic–metal interfaces have been analyzed in great detail [7][8]. In many cases

• superstructure: Depending on the registry of the layer and substrate atoms, the surface is divided in areas of low and high local work function, denoted as “pores” and “wires”, respectively [28][29][30][31]. In recent years, our group and others used hBN/Cu(111) to guide the self-assembly of porphyrins [28][32

Wafer-level integration of self-aligned high aspect ratio silicon 3D structures using the MACE method with Au, Pd, Pt, Cu, and Ir

• Mathias Franz,
• Romy Junghans,
• Paul Schmitt,
• Adriana Szeghalmi and
• Stefan E. Schulz

Beilstein J. Nanotechnol. 2020, 11, 1439–1449, doi:10.3762/bjnano.11.128

• nanoparticles were used to locally etch the silicon substrate. This work demonstrates a bottom-up self-assembly approach for noble metal nanoparticle formation and the subsequent silicon wet etching. The macroscopic wafer patterning has been done by using a poly(methyl methacrylate) masking layer. Different

Growth of a self-assembled monolayer decoupled from the substrate: nucleation on-command using buffer layers

• Robby Reynaerts,
• Kunal S. Mali and
• Steven De Feyter

Beilstein J. Nanotechnol. 2020, 11, 1291–1302, doi:10.3762/bjnano.11.113

• solution–solid interface. One of the ways to influence network formation at this interface is to physically decouple the self-assembled monolayer from the underlying substrate thereby removing the influence of the substrate lattice, if any. Here we show a systematic exploration of self-assembly of a

• layer. We discovered that the self-assembly on top of the buffer layer allows better control over the nanoscale manipulation of the self-assembled networks. Using the influence of the STM tip, we could initiate the nucleation of small isolated domains of the benzoic acid on-command in a reproducible

• fashion. Such controlled nucleation experiments hold promise for studying fundamental processes inherent to the assembly process on surfaces. Keywords: benzoic acid; nucleation; self-assembly; solution–solid interface; substrate effect; Introduction The ability of some molecules to crystalize in more

Hybridization vs decoupling: influence of an h-BN interlayer on the physical properties of a lander-type molecule on Ni(111)

• Maximilian Schaal,
• Takumi Aihara,
• Marco Gruenewald,
• Felix Otto,
• Jari Domke,
• Roman Forker,
• Hiroyuki Yoshida and
• Torsten Fritz

Beilstein J. Nanotechnol. 2020, 11, 1168–1177, doi:10.3762/bjnano.11.101

• mobility. This additional diffusion barrier thus hampers the molecular self-assembly and can be overcome by a higher substrate temperature during the film growth, which agrees with our structural findings above. Conclusion To summarize, we investigated the influence of an h-BN interlayer on the optical

Photothermally active nanoparticles as a promising tool for eliminating bacteria and biofilms

• Mykola Borzenkov,
• Piersandro Pallavicini,
• Angelo Taglietti,
• Laura D’Alfonso,
• Maddalena Collini and
• Giuseppe Chirico

Beilstein J. Nanotechnol. 2020, 11, 1134–1146, doi:10.3762/bjnano.11.98

• achieve the desired temperatures, thus restricting the practical implementation of the bacteria photothermal eradication [33]. The gold nanoparticle self-assembly on glass surfaces is a generally time-consuming process with a relatively poor reproducibility. These restrictions may also limit the full

Straightforward synthesis of gold nanoparticles by adding water to an engineered small dendrimer

• Sébastien Gottis,
• Régis Laurent,
• Vincent Collière and
• Anne-Marie Caminade

Beilstein J. Nanotechnol. 2020, 11, 1110–1118, doi:10.3762/bjnano.11.95

• when the powdered form of this dendrimer was dissolved in water, as shown by transmission electron microscopy (TEM) and energy dispersive X-ray spectroscopy (EDX) analyses. The dendrimers acted simultaneously as mild reducers and as nanoreactors, favoring the self-assembly of gold atoms and promoting

• a theoretical work was published in 2015 [65]. In this work, it was demonstrated that the first step required for the nonradical formation of an Au–Au bond was the presence of hydrogen followed by the insertion of a third gold atom to form a triangle by self-assembly. The release of only a small

• nanoreactor for the self-assembly of gold atoms, stabilizing the gold nanoparticles and inducing their water solubility forming colloidal suspensions. It must be emphasized that currently there is no other example of a comparable process in the literature. Possible extensions of this work should consider

A 3D-polyphenylalanine network inside porous alumina: Synthesis and characterization of an inorganic–organic composite membrane

• Jonathan Stott and
• Jörg J. Schneider

Beilstein J. Nanotechnol. 2020, 11, 938–951, doi:10.3762/bjnano.11.78

• have attracted significant attention in the last decades. Due their secondary structures (α-helix or β-sheet), polypeptides form macromolecular block segments, which can undergo a self-assembly process under certain circumstances [24][25]. The intramolecular interactions between these macromolecules as

Simulations of the 2D self-assembly of tripod-shaped building blocks

• Łukasz Baran,
• Wojciech Rżysko and
• Edyta Słyk

Beilstein J. Nanotechnol. 2020, 11, 884–890, doi:10.3762/bjnano.11.73

• diffraction pattern and average association number. Keywords: 2D materials; coarse-grained model; molecular simulations; self-assembly; structural characterization; tripod building blocks; Introduction On-surface synthesis is a newly developing field in chemistry that aims at making use of solid surfaces as

• this research, several factors have been established that can help to control the self-assembly process, such as precursor design [4][5], substrate nature and symmetry [6][7], type of solvent and its concentration, and thermodynamic conditions. The knowledge of the influence of these variables is

• ], tripod [15][16], tetrapod [17][18][19][20][21], and hexapod [22] architecture. Also, a lot of effort has been put into the investigation of the mixtures [23][24][25] and the guest-induced self-assembly [26] of aforementioned particles. An important aspect of the on-surface synthesis is that a lot of

Luminescent gold nanoclusters for bioimaging applications

• Nonappa

Beilstein J. Nanotechnol. 2020, 11, 533–546, doi:10.3762/bjnano.11.42

• ; biosensing; gold nanoclusters; immunoassay; luminescence; self-assembly; theranostics; Introduction Imaging methods play a central role in understanding the structural and functional biological processes of biomolecules, cells, tissues, organs, and even entire living organisms [1][2]. The importance of

• complexes and SCQD-based nanomaterials. To improve the quantum yield and PL, various approaches have been developed including ligand engineering, selective doping to create alloy clusters, aggregation-induced emission, selective etching and self-assembly [48][49][50][51][52][53][54][55][56][57][58]. Ligands

• reported highly luminescent gold nanocluster frameworks (AuNCFs) using self-assembly through metal chelation [53]. Glutathione-capped AuNCs [Au25(SG)18] spontaneously self-assembled into spherical AuNCFs upon controlled addition of SnCl2 (Figure 6C). The size of the AuNCFs was tunable from 30 to 200 nm in

Multilayer capsules made of weak polyelectrolytes: a review on the preparation, functionalization and applications in drug delivery

• Varsha Sharma and
• Anandhakumar Sundaramurthy

Beilstein J. Nanotechnol. 2020, 11, 508–532, doi:10.3762/bjnano.11.41

• release is an important aspect. Different types of driving forces define the physical and chemical properties of the capsules such as permeability, stability, stimuli responsiveness and its application in vitro and in vivo. Self-assembly formed by LbL deposition of alternatively charged PEs is governed by

Nanoarchitectonics: bottom-up creation of functional materials and systems

• Katsuhiko Ariga

Beilstein J. Nanotechnol. 2020, 11, 450–452, doi:10.3762/bjnano.11.36

• synthesis; nanoarchitectonics; nanotechnology; self-assembly; supramolecular; Given the significant and time-critical problems of energy shortage, environmental protection, and biomedical issues, the creation of new functional materials and systems for efficient energy production and storage [1][2

• , the chiral structure was found to control the self-assembly of nitrocinnamic amide amphiphiles [25]. Works related to the formation of higher-dimensional materials included, for example, the self-assembly of crystalline cellulose oligomers that resulted in nanoribbon networks [26], silicon nanowires

• that were formed by metal-assisted chemical etching (MACE) [27], and the formation of high-tolerance crystalline hydrogels from cyclic dipeptides upon self-assembly [28]. In addition, a review on the use of DNA as the fundamental material building block for molecular and structural engineering [29