Phylogenomic analyses and distribution of terpene synthases among Streptomyces

Lara Martín-Sánchez, Kumar Saurabh Singh, Mariana Avalos, Gilles P. van Wezel, Jeroen S. Dickschat and Paolina Garbeva
Beilstein J. Org. Chem. 2019, 15, 1181–1193.

Supporting Information

Supporting Information File 1: Additional figures and tables.
Format: PDF Size: 1.6 MB Download

Cite the Following Article

Phylogenomic analyses and distribution of terpene synthases among Streptomyces
Lara Martín-Sánchez, Kumar Saurabh Singh, Mariana Avalos, Gilles P. van Wezel, Jeroen S. Dickschat and Paolina Garbeva
Beilstein J. Org. Chem. 2019, 15, 1181–1193.

How to Cite

Martín-Sánchez, L.; Singh, K. S.; Avalos, M.; van Wezel, G. P.; Dickschat, J. S.; Garbeva, P. Beilstein J. Org. Chem. 2019, 15, 1181–1193. doi:10.3762/bjoc.15.115

Download Citation

Citation data can be downloaded as file using the "Download" button or used for copy/paste from the text window below.
Citation data in RIS format can be imported by all major citation management software, including EndNote, ProCite, RefWorks, and Zotero.

Presentation Graphic

Picture with graphical abstract, title and authors for social media postings and presentations.
Format: PNG Size: 1.1 MB Download

Citations to This Article

Up to 20 of the most recent references are displayed here.

Scholarly Works

  • He, Z.; Sun, Y.; Chu, M.; Zhu, J.; Zhang, Y.; Tang, Q.; Osman, G.; Jiang, L.; Zhang, Z. Screening of a Novel Fibrinolytic Enzyme-Producing Streptomyces from a Hyper-Arid Area and Optimization of Its Fibrinolytic Enzyme Production. Fermentation 2023, 9, 410. doi:10.3390/fermentation9050410
  • Garbeva, P.; Avalos, M.; Ulanova, D.; van Wezel, G. P.; Dickschat, J. S. Volatile sensation: The chemical ecology of the earthy odorant geosmin. Environmental microbiology 2023. doi:10.1111/1462-2920.16381
  • Liu, H.; Fang, S.; Zhao, L.; Men, X.; Zhang, H. A Single Active-Site Mutagenesis Confers Enhanced Activity and/or Changed Product Distribution to a Pentalenene Synthase from Streptomyces sp. PSKA01. Bioengineering (Basel, Switzerland) 2023, 10, 392. doi:10.3390/bioengineering10030392
  • Borba, M. P.; Witusk, J. P.; Cunha, D. M.; de Lima-Morales, D.; Martins, A. F.; Van Der Sand, S. Whole-genome sequencing-based characterization of Streptomyces sp. 6(4): focus on natural product. Access microbiology 2023, 5. doi:10.1099/acmi.0.000466.v3
  • P, V.; T, N.; S, S.; R, S.; S, J.; Christopher, J. G. Streptomyces sp. VITGV100: An endophyte from Lycopersicon esculentum as new source of indole type compounds. Biochemical Systematics and Ecology 2022, 105, 104523. doi:10.1016/j.bse.2022.104523
  • Williams, S. E.; Back, C. R.; Best, E.; Mantell, J.; Stach, J. E. M.; Williams, T. A.; Race, P. R.; Curnow, P. Discovery and biosynthetic assessment ofStreptomyces ortussp nov. isolated from a deep-sea sponge. Cold Spring Harbor Laboratory 2022. doi:10.1101/2022.11.21.517041
  • Masteling, R.; de Boer, W.; Raaijmakers, J. M.; Garbeva, P.; Dini-Andreote, F. Microbial volatiles as mediators of eco-evolutionary dynamics. Frontiers in Ecology and Evolution 2022, 10. doi:10.3389/fevo.2022.960198
  • Gu, B.; Hou, A.; Dickschat, J. S. The stereochemical course of 2-methylisoborneol biosynthesis. Beilstein journal of organic chemistry 2022, 18, 818–824. doi:10.3762/bjoc.18.82
  • Wadler, C. S.; Wolters, J. F.; Fortney, N. W.; Throckmorton, K. O.; Zhang, Y.; Miller, C. R.; Schneider, R. M.; Wendt-Pienkowski, E.; Currie, C. R.; Donohue, T. J.; Noguera, D. R.; Hittinger, C. T.; Thomas, M. G. Utilization of lignocellulosic biofuel conversion residue by diverse microorganisms. Biotechnology for biofuels and bioproducts 2022, 15, 70. doi:10.1186/s13068-022-02168-0
  • Dionysius, L. G.; Brooks, P. R.; Kurtböke, D. İ. Detection and control of off-flavour compound-producing streptomycetes on locally produced nuts using streptophages. Microbiology Australia 2022, 43, 36–39. doi:10.1071/ma22011
  • Hulst, M. B.; Grocholski, T.; Neefjes, J. J. C.; van Wezel, G. P.; Metsä-Ketelä, M. Anthracyclines: biosynthesis, engineering and clinical applications. Natural product reports 2022, 39, 814–841. doi:10.1039/d1np00059d
  • Li, G.; Zhang, Z.; Wu, M.; Chen, X.; Yin, M.; Jiang, Y.; Huang, X.; Jiang, C.; Han, L. The discovery of germacradienol synthase: Construction of genetically-engineered strain, glycosylated modification, bioactive evaluation of germacradienol. Bioorganic chemistry 2022, 124, 105819. doi:10.1016/j.bioorg.2022.105819
  • Zaroubi, L.; Ozugergin, I.; Mastronardi, K.; Imfeld, A.; Law, C.; Gélinas, Y.; Piekny, A.; Findlay, B. L. The Ubiquitous Soil Terpene Geosmin Acts as a Warning Chemical. Applied and environmental microbiology 2022, 88, e0009322. doi:10.1128/aem.00093-22
  • Xu, H.; Dickschat, J. S. Hedycaryol - Central Intermediates in Sesquiterpene Biosynthesis, Part II. Chemistry (Weinheim an der Bergstrasse, Germany) 2022, 28, e202200405. doi:10.1002/chem.202200405
  • Avalos, M.; Garbeva, P.; Vader, L.; van Wezel, G. P.; Dickschat, J. S.; Ulanova, D. Biosynthesis, evolution and ecology of microbial terpenoids. Natural product reports 2022, 39, 249–272. doi:10.1039/d1np00047k
  • Caicedo-Montoya, C.; Manzo-Ruiz, M.; Ríos-Estepa, R. Pan-Genome of the Genus Streptomyces and Prioritization of Biosynthetic Gene Clusters With Potential to Produce Antibiotic Compounds. Frontiers in microbiology 2021, 12, 677558. doi:10.3389/fmicb.2021.677558
  • Xu, H.; Rinkel, J.; Dickschat, J. S. Isoishwarane synthase from Streptomyces lincolnensis. Organic Chemistry Frontiers 2021, 8, 1177–1184. doi:10.1039/d0qo01583k
  • L, Z.; I, O.; Mastronardi, K.; A, I.; Law, C.; Gélinas, Y.; Piekny, A.; Bl, F. The ubiquitous terpene geosmin is a warning chemical. Cold Spring Harbor Laboratory 2021. doi:10.1101/2021.03.09.434661
  • Pham, V. T. T.; Nguyen, C. T.; Dhakal, D.; Nguyen, H. T.; Kim, T.-S.; Sohng, J. K. Recent Advances in the Heterologous Biosynthesis of Natural Products from Streptomyces. Applied Sciences 2021, 11, 1851. doi:10.3390/app11041851
  • Weisskopf, L.; Schulz, S.; Garbeva, P. Microbial volatile organic compounds in intra-kingdom and inter-kingdom interactions. Nature reviews. Microbiology 2021, 19, 391–404. doi:10.1038/s41579-020-00508-1
Other Beilstein-Institut Open Science Activities