DNA–melamine hybrid molecules: from self-assembly to nanostructures

• Rina Kumari,
• Shib Shankar Banerjee,
• Anil K. Bhowmick and
• Prolay Das

Beilstein J. Nanotechnol. 2015, 6, 1432–1438, doi:10.3762/bjnano.6.148

• ]. However, the directionality of the single-stranded DNA (ssDNA) sequences obtained through a DNA synthesizer is limited only to the terminal positions. This could limit further DNA extension in both directions. As a recent trend, DNA–organic molecule hybrid structures are being produced post-synthesis to

• electronics where tunable electronic properties and templated metallization are frequently warranted [22][23][24]. Herein, we report the facile creation of DNA–organic hybrid molecules and demonstrate their self-assembly to create nanostructures. The organic molecule used here is melamine, a nitrogen-rich

• reaction is that restriction-digested fragments could be used to introduce an organic molecule of interest using this method. In addition, the resulting molecular building blocks are open to extension in both directions by relevant physico-chemical methods such as hybridization, polymerase chain reaction

Can molecular projected density of states (PDOS) be systematically used in electronic conductance analysis?

• Tonatiuh Rangel,
• Gian-Marco Rignanese and
• Valerio Olevano

Beilstein J. Nanotechnol. 2015, 6, 1247–1259, doi:10.3762/bjnano.6.128

• , such as organic molecule junctions, the DFT-Landauer estimate can be several orders of magnitude larger than the experiment [1][14]. Several solutions have been proposed to alleviate this discrepancy such as: self-interaction corrections [15][16], hybrid mixed Hartree–Fock approaches [17], a many-body

Charge carrier mobility and electronic properties of Al(Op)₃: impact of excimer formation

• Andrea Magri,
• Pascal Friederich,
• Bernhard Schäfer,
• Valeria Fattori,
• Xiangnan Sun,
• Timo Strunk,
• Velimir Meded,
• Luis E. Hueso,
• Wolfgang Wenzel and
• Mario Ruben

Beilstein J. Nanotechnol. 2015, 6, 1107–1115, doi:10.3762/bjnano.6.112

• importance. Conclusion We have synthesized and characterized a novel, Al-based, metallo-organic molecule as an alternative to the de facto, industry standard, electron transporting material, Alq3. The initial assumptions based on the extended aromatic structure of Al(Op)3 and confirmed by the theoretical DFT

Chemoselective silicification of synthetic peptides and polyamines

• Maryna Abacilar,
• Fabian Daus and
• Armin Geyer

Beilstein J. Nanotechnol. 2015, 6, 103–110, doi:10.3762/bjnano.6.10

• after each stepwise addition of TMOS as described in the competition experiments below. The dynamic range of modern NMR spectrometers (16 bit digitizer) is big enough to resolve the signal intensity of the organic molecule in the presence of a large methanol signal from the TMOS hydrolysis. Their

Electronic and electrochemical doping of graphene by surface adsorbates

• Hugo Pinto and
• Alexander Markevich

Beilstein J. Nanotechnol. 2014, 5, 1842–1848, doi:10.3762/bjnano.5.195

• level, that is a clear evidence of induced p-type doping. Graphene layers with p-type conductivity can also be produced by deposition of some organic molecules. Tetrafluorotetracyanoquinodimethane (F4-TCNQ), shown in Figure 4, is an organic molecule with a strong electron affinity, which was previously

Interaction of iron phthalocyanine with the graphene/Ni(111) system

• Lorenzo Massimi,
• Simone Lisi,
• Daniela Pacilè,
• Carlo Mariani and
• Maria Grazia Betti

Beilstein J. Nanotechnol. 2014, 5, 308–312, doi:10.3762/bjnano.5.34

• (111). The results have been compared to the deposition of iron phthalocyanine on graphene/Ir(111), for which a higher decoupling of the organic molecule from the underlying metal is exerted by the graphene buffer layer. Keywords: angular-resolved photo-electron spectroscopy (ARPES); buffer layer

• ]. Conclusion When used as a buffer layer between an organic molecule and a metal surface, graphene plays a different role in the molecule–metal interaction that depends on the interaction of graphene with the metal substrate. Graphene on Ni(111) reveals a strong interaction with the substrate and strong

Energy transfer in complexes of water-soluble quantum dots and chlorin e6 molecules in different environments

• Irina V. Martynenko,
• Anna O. Orlova,
• Vladimir G. Maslov,
• Alexander V. Baranov,
• Anatoly V. Fedorov and
• Mikhail Artemyev

Beilstein J. Nanotechnol. 2013, 4, 895–902, doi:10.3762/bjnano.4.101

• mechanism of the QD PL quenching in the QD–organic molecule complexes. This mechanism is efficient if either both LUMO and HOMO or one of these orbitals of the quencher molecule is located within the energy gap of the CdSe QD. In this case the photoexcited electron or hole tunnels from the QD core through

Dynamic nanoindentation by instrumented nanoindentation and force microscopy: a comparative review

• Sidney R. Cohen and
• Estelle Kalfon-Cohen

Beilstein J. Nanotechnol. 2013, 4, 815–833, doi:10.3762/bjnano.4.93

• can be achieved with noncontact AFM allows for a quantitative detection of dissipation that involves the formation and the breakage of weak intermolecular bonds in an organic molecule [106]. However, for many practical cases, the separation entails energy dissipation in the bulk material – generally a

Influence of the solvent on the stability of bis(terpyridine) structures on graphite

• Daniela Künzel and
• Axel Groß

Beilstein J. Nanotechnol. 2013, 4, 269–277, doi:10.3762/bjnano.4.29

• because hydrogen bonds are less important in the TCB bonding. Validation step 2: solvation energies As a further validation, we addressed the interaction between solvent and dissolved organic molecule, which should be reproduced accurately for a meaningful description of the system. As test systems, we

Spring constant of a tuning-fork sensor for dynamic force microscopy

• Dennis van Vörden,
• Manfred Lange,
• Merlin Schmuck,
• Nico Schmidt and
• Rolf Möller

Beilstein J. Nanotechnol. 2012, 3, 809–816, doi:10.3762/bjnano.3.90

• determining the structure of an unknown organic molecule [4]. In FM-AFM, the motion of the sensor is given in very good approximation by a harmonic oscillator. For the limit of small amplitudes the measurement of the frequency shift provides the average force gradient caused by the interaction between the tip

Functionalised zinc oxide nanowire gas sensors: Enhanced NO₂ gas sensor response by chemical modification of nanowire surfaces

• Eric R. Waclawik,
• Jin Chang,
• Andrea Ponzoni,
• Isabella Concina,
• Dario Zappa,
• Elisabetta Comini,
• Nunzio Motta,
• Guido Faglia and
• Giorgio Sberveglieri

Beilstein J. Nanotechnol. 2012, 3, 368–377, doi:10.3762/bjnano.3.43

• through organic SAM functionalisation of the semiconductor surface is a chemical effect. Since only the outermost 5 Å of a surface completely determines its chemical properties, that is whether it is hydrophobic, hydrophilic, acidic, or basic for example, surface functionalisation with an organic molecule

• nanowires was examined. The response of the nanowire sensors when functionalised with organic molecule layers of dodecanethiol, tris(hydroxymethyl)aminomethane and also with DT, or THMA-functionalised ZnO nanoparticles was compared for ammonia, nitrous oxide and nitrogen dioxide. Of the three gases examined

Dipole-driven self-organization of zwitterionic molecules on alkali halide surfaces

• Laurent Nony,
• Franck Bocquet,
• Franck Para,
• Frédéric Chérioux,
• Eric Duverger,
• Frank Palmino,
• Vincent Luzet and
• Christian Loppacher

Beilstein J. Nanotechnol. 2012, 3, 285–293, doi:10.3762/bjnano.3.32

• force microscopy; organic molecule; self-organization; zwitterion; Introduction The adsorption of organic molecules on a crystalline substrate surface is governed by a delicate balance between the molecule–molecule (MM) and the molecule–substrate (MS) interaction. The latter can strongly depend on the

• strong MS interaction, which can either be caused by covalent binding or by weak overlap between the π-orbitals of the organic molecule and the electronic states of the surface. On the other hand, for insulating substrates, the vertical MS interaction is often much weaker than, for example, the

A measurement of the hysteresis loop in force-spectroscopy curves using a tuning-fork atomic force microscope

• Manfred Lange,
• Dennis van Vörden and
• Rolf Möller

Beilstein J. Nanotechnol. 2012, 3, 207–212, doi:10.3762/bjnano.3.23

• to its large spring constant of about 9000 N/m. The force-spectroscopy measurements were performed on the organic molecule 3,4,9,10-perylene-tetracarboxylic-dianhydride (PTCDA) grown on a Ag/Si(111) √3 × √3 surface. PTCDA has been extensively studied as a candidate for organic devices [10][11][12][13

Molecular-resolution imaging of pentacene on KCl(001)

• Julia L. Neff,
• Jan Götzen,
• Enhui Li,
• Michael Marz and
• Regina Hoffmann-Vogel

Beilstein J. Nanotechnol. 2012, 3, 186–191, doi:10.3762/bjnano.3.20

• thin-film electronic devices due to its high carrier mobility [12]. Besides its high carrier mobility, this π-conjugated organic molecule shows shape anisotropy, which leads to a preferential orientation with respect to the substrate in bulk crystals and crystalline thin films. Shape anisotropy also

Surface functionalization of aluminosilicate nanotubes with organic molecules

• Wei Ma,
• Weng On Yah,
• Hideyuki Otsuka and
• Atsushi Takahara

Beilstein J. Nanotechnol. 2012, 3, 82–100, doi:10.3762/bjnano.3.10

• robust affinity between the phosphate group of the organic molecule and the aluminol (AlOH) surface of the imogolite nanotube. Surface modification of imogolite at the nanotube level is achieved from an aqueous solution by using a water-soluble ammonium salt of an alkyl phosphate. In addition, poly

Transmission eigenvalue distributions in highly conductive molecular junctions

• Justin P. Bergfield,
• Joshua D. Barr and
• Charles A. Stafford

Beilstein J. Nanotechnol. 2012, 3, 40–51, doi:10.3762/bjnano.3.5

• the rank of Γα is equal to the number of covalent bonds formed between the two. For example, in a SMJ where a Au electrode bonds to an organic molecule through a thiol group, only a single bond is formed, and there is only one significant transmission channel [15][16]. In Pt–benzene–Pt junctions

• effective field theory of interacting π-electron systems (π-EFT) as described in detail in [14]. Briefly, this was done by starting with the full electronic Hamiltonian of a conjugated organic molecule and by dropping degrees of freedom far from the π-electron energy scale. The effective π-orbitals were

Femtosecond time-resolved photodissociation dynamics of methyl halide molecules on ultrathin gold films

• Mihai E. Vaida,
• Robert Tchitnga and
• Thorsten M. Bernhardt

Beilstein J. Nanotechnol. 2011, 2, 618–627, doi:10.3762/bjnano.2.65

• insight into fundamental issues of the ultrafast reaction dynamics of molecules on metallic surfaces and the influence of organic-molecule–inorganic-substrate interactions on the molecular photoreaction dynamics. Results and Discussion In the following, the results of the molecular adsorption studies and

Influence of water on the properties of an Au/Mpy/Pd metal/molecule/metal junction

• Jan Kučera and
• Axel Groß

Beilstein J. Nanotechnol. 2011, 2, 384–393, doi:10.3762/bjnano.2.44

• design of future bionanoelectronics in which the organic (molecule) and inorganic (metal) units will communicate with each other. Yet, there are many fundamental questions open with respect to the factors that play a crucial role in the preparation, characterization, and operation of metal/SAM/metal

Novel acridone-modified MCM-41 type silica: Synthesis, characterization and fluorescence tuning

• Maximilian Hemgesberg,
• Gunder Dörr,
• Yvonne Schmitt,
• Andreas Seifert,
• Zhou Zhou,
• Robin Klupp Taylor,
• Sarah Bay,
• Stefan Ernst,
• Markus Gerhards,
• Thomas J. J. Müller and
• Werner R. Thiel

Beilstein J. Nanotechnol. 2011, 2, 284–292, doi:10.3762/bjnano.2.33

• decrease of ordering with increasing bulk of the organic groups, although all exhibited very high specific surface areas. As the formation of micelles will strongly depend on the nature of the organic molecule and its concentration, it was decided to keep the amount of precursor 1 at 10 mol % with respect