Asymmetric synthesis of fluorinated derivatives of aromatic and γ-branched amino acids via a chiral Ni(II) complex

• Maurizio Iannuzzi,
• Thomas Hohmann,
• Michael Dyrks,
• Kilian Haoues,
• Katarzyna Salamon-Krokosz and
• Beate Koksch

Beilstein J. Org. Chem. 2025, 21, 659–669, doi:10.3762/bjoc.21.52

• fluorinated alkyl iodide precursor 10, the corresponding alkylation reaction with the Ni(II) complex 1 was conducted under previously optimized conditions for the synthesis of Fmoc-TfIle [13] in terms of base (NaH) and solvent (DMF) and thoroughly screened in terms of base equivalents, concentration and

Entry to 2-aminoprolines via electrochemical decarboxylative amidation of N‑acetylamino malonic acid monoesters

• Olesja Koleda,
• Janis Sadauskis,
• Darja Antonenko,
• Edvards Janis Treijs,
• Raivis Davis Steberis and
• Edgars Suna

Beilstein J. Org. Chem. 2025, 21, 630–638, doi:10.3762/bjoc.21.50

• observed (see Supporting Information File 1, page S3). Decrease in supporting electrolyte concentration led to a drop in yields (Table 1, entry 9 vs entry 8), whereas current density deviations from 12 mA/cm2 did not affect the outcome of 6a (see Supporting Information File 1, page S4). Interestingly

• (0.1 M, electrochemical grade) was employed as the supporting electrolyte in 5:1 MeCN/H2O solution. The electrolyte was purged with argon for at least 3 min prior to recording. Compounds 6a and 9a were analyzed at a concentration of 3 mM or 6 mM and at a scan rate of 100 mV s−1. The peak potential Ep

• mM concentration, respectively, in 5:1 MeCN/H2O (0.1 M Et4N–BF4). B) Anodic oxidation of pyrrolidine 6a. Plausible mechanism for formation of pyrrolidine 6a and hemiaminal 10a. Preparation of malonic acid monoester 9a. Electrolysis of acid 9d in deuterated solvents. Scope of the decarboxylative

Semisynthetic derivatives of massarilactone D with cytotoxic and nematicidal activities

• Rémy B. Teponno,
• Sara R. Noumeur and
• Marc Stadler

Beilstein J. Org. Chem. 2025, 21, 607–615, doi:10.3762/bjoc.21.48

• added to 120 µL aliquots of a cell suspension (5 × 104 cells/mL) in 96-well microplates. After 5 days incubation, an MTT assay was performed, and the absorbance measured at 590 nm using an ELISA plate reader (Victor). The concentration at which the growth of cells was inhibited to 50% of the control

• (100, 50, 25 and 12.5 μg/mL). Ivermectin was used as a positive control at the same concentration ranges as the tested compounds and MeOH was used as a negative control. Percentages of mortality were calculated, then the results were expressed as a LD90 and LD50. Preparation of massarilactone D

Asymmetric synthesis of β-amino cyanoesters with contiguous tetrasubstituted carbon centers by halogen-bonding catalysis with chiral halonium salt

• Yasushi Yoshida,
• Maho Aono,
• Takashi Mino and
• Masami Sakamoto

Beilstein J. Org. Chem. 2025, 21, 547–555, doi:10.3762/bjoc.21.43

• chiral halonium salt. Next, the reaction temperature was optimized, and −40 °C was found to be optimal (Table 1, entries 7–9). Further optimization of the reaction conditions (amounts of potassium carbonate and pre-nucleophile, catalyst loading, and concentration) were conducted, and the reaction with

Binding of tryptophan and tryptophan-containing peptides in water by a glucose naphtho crown ether

• Gianpaolo Gallo and
• Bartosz Lewandowski

Beilstein J. Org. Chem. 2025, 21, 541–546, doi:10.3762/bjoc.21.42

• – a chemoselective receptor for aromatic amino acid esters in water. Fluorescence emission spectra of receptor 1 (25 μM in H2O) upon addition of increasing amounts of tripeptide 2. The concentration of the guest corresponding to each curve is indicated on the right. The arrow marks the quenching of

Deep-blue emitting 9,10-bis(perfluorobenzyl)anthracene

• Long K. San,
• Sebastian Balser,
• Brian J. Reeves,
• Tyler T. Clikeman,
• Yu-Sheng Chen,
• Steven H. Strauss and
• Olga V. Boltalina

Beilstein J. Org. Chem. 2025, 21, 515–525, doi:10.3762/bjoc.21.39

• photoproducts were insoluble resulting in decreased concentration of 9,10-ANTH(BnF)2 in the irradiated solution or new photoproducts had similar absorption features. To identify the photoproducts in the irradiated solutions of ANTH and 9,10-ANTH(BnF)2, complementary NMR analyses were carried out (Figures S6 and

Unprecedented visible light-initiated topochemical [2 + 2] cycloaddition in a functionalized bimane dye

• Metodej Dvoracek,
• Brendan Twamley,
• Mathias O. Senge and
• Mikhail A. Filatov

Beilstein J. Org. Chem. 2025, 21, 500–509, doi:10.3762/bjoc.21.37

• fluorescence spectra are presented in Supporting Information File 1 (Figures S12–S14). For the fluorescence quantum yield measurements, solutions of each bimane were prepared, and the concentration was adjusted so that the absorbance at the right shoulder of the band at 360 nm falls within the range of 0.03

• using UV–vis spectroscopy, where the concentration was adjusted such that the absorbance is 2.164 at the λmax. The solution was added into a quartz fluorescence cuvette, and irradiated for 15 minutes at a time using the same 405 nm LEDs in a turntable chamber. Structures of a) the unfunctionalized

Synthesis of N-acetyl diazocine derivatives via cross-coupling reaction

• Thomas Brandt,
• Pascal Lentes,
• Jeremy Rudtke,
• Michael Hösgen,
• Christian Näther and
• Rainer Herges

Beilstein J. Org. Chem. 2025, 21, 490–499, doi:10.3762/bjoc.21.36

• neurotransmitters [10][11] or as switching units for potential dependent potassium channels [12]. Compared to the Z → E conversion rate of 92% (in n-hexane) of the parent diazocine the conversion in water/DMSO mixtures is decreasing with increasing water concentration (73% in water/DMSO 9:1) [8][9][10][11][12

Synthesis of electrophile-tethered preQ₁ analogs for covalent attachment to preQ₁ RNA

• Laurin Flemmich and
• Ronald Micura

Beilstein J. Org. Chem. 2025, 21, 483–489, doi:10.3762/bjoc.21.35

• . PreQ1 riboswitches sense the cellular concentration of preQ1 and regulate the expression of downstream located genes associated with the biosynthesis or transport of Q in a feedback-like manner. Binding of PreQ1 to the mRNA causes the riboswitch to commit an altered folding pathway, which affects the

Organocatalytic kinetic resolution of 1,5-dicarbonyl compounds through a retro-Michael reaction

• James Guevara-Pulido,
• Fernando González-Pérez,
• José M. Andrés and
• Rafael Pedrosa

Beilstein J. Org. Chem. 2025, 21, 473–482, doi:10.3762/bjoc.21.34

• the kinetic resolution at a concentration of approximately ten millimolar (mM) to prevent the Michael retro-Michael equilibrium from affecting the process. Keywords: 1,5-dicarbonyl; equilibrium; kinetic resolution; organocatalysis; retro-Michael; Introduction For many years, enantiomers have been

• promotes the Michael reaction, leading to the formation of the enantiomer (3R,4S) and consequently returning to the racemate. Then, we decided to investigate how concentration affects the rate and selectivity of the reaction at room temperature (Table 4). The retro-Michael reaction mainly occurs at a

• concentration of 0.17 M, producing a nearly racemic mixture of anti-1 (entries 1 and 2, Table 4). Lowering the concentration to 0.10 M slows the reaction and improves the enantiomeric ratio (entries 3 and 4, Table 4), but a nearly racemic mixture is obtained again with longer reaction times (entry 5, Table 4

Photomechanochemistry: harnessing mechanical forces to enhance photochemical reactions

• Francesco Mele,
• Ana M. Constantin,
• Andrea Porcheddu,
• Raimondo Maggi,
• Giovanni Maestri,
• Nicola Della Ca’ and
• Luca Capaldo

Beilstein J. Org. Chem. 2025, 21, 458–472, doi:10.3762/bjoc.21.33

• turn demands large volumes of solvents, negatively impacting the sustainability of light-mediated synthesis as it transitions from academic curiosity to industrial application. Moreover, since the solvent is the reaction component with the highest concentration, competitive side-reactions such as

• mechanochemistry holds potential for unique opportunities for substrate activation while adopting an environmentally benign emerging technology (Figure 2, top). For example, it is well known that molecules in the solid state (or in very high concentration) often exhibit photophysical behaviors distinct from those

• working at this interface have the potential to redefine the landscape of sustainable synthesis, with this Perspective serving as a snapshot of the current state-of-the-art. The Grotthuss–Draper, Einstein–Stark, and Beer–Lambert laws. T: transmittance; ε: molar attenuation coefficient; c: concentration; l

Beyond symmetric self-assembly and effective molarity: unlocking functional enzyme mimics with robust organic cages

• Keith G. Andrews

Beilstein J. Org. Chem. 2025, 21, 421–443, doi:10.3762/bjoc.21.30

• water (Figure 2A) [71][72][73], or by binding a hydrophobic substrate and holding it close to a functional(ized) rim (e.g., as in cyclodextrins) that performs a reaction (Figure 2B) [74][75][76][77][78][79]. These effects are driven mostly by effective concentration/molarity (i.e., proximity of reacting

• concentration. As for the macrocycles discussed above, dual confinement/encapsulation [36] and the hydrophobic effect dominate the origin of catalytic rate enhancements [158][159]. To avoid product inhibition, model reactions that increase molecularity (A → B + C) or that generate weakly interacting or less

Identification and removal of a cryptic impurity in pomalidomide-PEG based PROTAC

• Bingnan Wang,
• Yong Lu and
• Chuo Chen

Beilstein J. Org. Chem. 2025, 21, 407–411, doi:10.3762/bjoc.21.28

• reaction was concentration dependent, giving various amounts of 6 under otherwise the same reaction conditions. For example, at 10–30 mM wherein most of the pilot studies were conducted, the ratio of 3 and 6 could be as low as ≈1:50 by 1H NMR and ≈1:10 by MS analysis. Under these conditions, the formation

The effect of neighbouring group participation and possible long range remote group participation in O-glycosylation

• Rituparna Das and
• Balaram Mukhopadhyay

Beilstein J. Org. Chem. 2025, 21, 369–406, doi:10.3762/bjoc.21.27

• idea of glycosylation mechanisms to enable the readers to have a background idea as a reference before going to describe the role of protecting groups. The mechanistic pathway of glycosylation strongly depends on many factors, especially, the concentration of the participating moieties, the reaction

Synthesis, structure, ionochromic and cytotoxic properties of new 2-(indolin-2-yl)-1,3-tropolones

• Yurii A. Sayapin,
• Eugeny A. Gusakov,
• Inna O. Tupaeva,
• Alexander D. Dubonosov,
• Igor V. Dorogan,
• Valery V. Tkachev,
• Anna S. Goncharova,
• Gennady V. Shilov,
• Natalia S. Kuznetsova,
• Svetlana Y. Filippova,
• Tatyana A. Krasnikova,
• Yanis A. Boumber,
• Alexey Y. Maksimov,
• Sergey M. Aldoshin and
• Vladimir I. Minkin

Beilstein J. Org. Chem. 2025, 21, 358–368, doi:10.3762/bjoc.21.26

• possibility of carrying out subsequent stages of research and selecting promising compounds for the further development of anticancer drugs [30]. The study showed that the IC50 inhibitory concentration of 2-(1,1-dimethyl-1H-benzo[e]indolin-2-yl)-5,6,7-trichloro-1,3-tropolone (7a) against the A431 skin cancer

Synthesis, characterization, antimicrobial, cytotoxic and carbonic anhydrase inhibition activities of multifunctional pyrazolo-1,2-benzothiazine acetamides

• Ayesha Saeed,
• Shahana Ehsan,
• Muhammad Zia-ur-Rehman,
• Erin M. Marshall,
• Sandra Loesgen,
• Abdus Saleem,
• Simone Giovannuzzi and
• Claudiu T. Supuran

Beilstein J. Org. Chem. 2025, 21, 348–357, doi:10.3762/bjoc.21.25

• inhibitory concentration, MIC90) values for compounds 7b and 7h against three different strains of Staphylococcus aureus: susceptible (ATCC 25923), methicillin-resistant (ATCC BAA-41), and multidrug-resistant (ATCC BAA-44). Table 2 shows the MIC90 values for the two halogenated compounds against different

• acetonitrile was added dropwise. Then, the reaction mixture was continued to reflux for 24 h or until the termination of the reaction. Reaction progress was monitored after intervals using TLC. On completion, filtration of the reaction mixture was performed followed by concentration under vacuum. It was then

• concentration under vacuum. It was then diluted with cold water and acidified with 5% cold HCl. The solution was allowed to stand for 15 minutes to complete precipitation. Precipitates were collected via filtration and washed with excess distilled water. The dried product was then recrystallized from absolute

Antibiofilm and cytotoxic metabolites from the entomopathogenic fungus Samsoniella aurantia

• Rita Toshe,
• Syeda J. Khalid,
• Blondelle Matio Kemkuignou,
• Esteban Charria-Girón,
• Paul Eckhardt,
• Birthe Sandargo,
• Kunlapat Nuchthien,
• J. Jennifer Luangsa-ard,
• Till Opatz,
• Hedda Schrey,
• Sherif S. Ebada and
• Marc Stadler

Beilstein J. Org. Chem. 2025, 21, 327–339, doi:10.3762/bjoc.21.23

• screening assays were conducted to explore their antibiofilm properties. According to the crystal violet (CV) assay, both compounds exhibited significant activity in the S. aureus biofilm inhibition assay. Farinosone A (2) (Figure 5A) displayed activity at a concentration as low as 3.9 µg/mL, resulting in

• approximately 68% inhibition of biofilm formation. Similarly, farinosone D (1) demonstrated activity up to a concentration of 15.62 µg/mL, achieving a comparable inhibitory effect of approximately 74% at this dilution. In addition, only farinosone A (2) (Figure 5B) demonstrated moderate activity in the

• preformed biofilm assay, dispersing a 24 hour preformed biofilm up to a concentration of 15.62 µg/mL with an eradication capacity of 43%. To evaluate whether the remaining biofilm biomass in the wells was metabolically active or not, a cell viability (XTT) assay was conducted after 24 hour treatment of S

Red light excitation: illuminating photocatalysis in a new spectrum

• Lucas Fortier,
• Corentin Lefebvre and
• Norbert Hoffmann

Beilstein J. Org. Chem. 2025, 21, 296–326, doi:10.3762/bjoc.21.22

• deeper than blue light when comparing the two molar extinction coefficients of [Os(tpy)2]2+ at 450 and 740 nm for a same concentration according to the Beer–Lambert law, hence ensuring more uniform photon exposure and an improved reaction efficiency. This enhanced light penetration is reflected in the

Oxidation of [3]naphthylenes to cations and dications converts local paratropicity into global diatropicity

• Abel Cárdenas,
• Zexin Jin,
• Yong Ni,
• Jishan Wu,
• Yan Xia,
• Francisco Javier Ramírez and
• Juan Casado

Beilstein J. Org. Chem. 2025, 21, 277–285, doi:10.3762/bjoc.21.20

• +) couple. Electrolyte solutions, at a concentration 0.1 M, were prepared from anhydrous, degassed HPLC grade CH2Cl2 and anhydrous Bu4NPF6. Voltammograms were recorded at a sweep rate of 100 mV s−1. Sample concentrations were ca. 1–2 mM. Electronic spectroscopy UV–vis–NIR spectroelectrochemical studies were

• working and counter electrodes, respectively. A Ag wire was employed as the pseudo-reference electrode in a 0.1 M solution of Bu4NPF6 in freshly distilled CH2Cl2. Sample concentration was 1 mM. The spectra were collected by constant potential electrolysis, and the potentials were changed in intervals of

Synthesis and characterizations of highly luminescent 5-isopropoxybenzo[rst]pentaphene

• Islam S. Marae,
• Jingyun Tan,
• Rengo Yoshioka,
• Zakaria Ziadi,
• Eugene Khaskin,
• Serhii Vasylevskyi,
• Ryota Kabe,
• Xiushang Xu and
• Akimitsu Narita

Beilstein J. Org. Chem. 2025, 21, 270–276, doi:10.3762/bjoc.21.19

• intriguing rod-like nano- to microcrystals and/or longer wires, which were visualized by scanning electron microscopy (SEM). Results and Discussion BPP 2 could be prepared by the “DPEX” reaction [12] in 60% yield on a 0.1 g scale from dialdehyde 1 with a concentration of 0.60 mM (Table 1, entry 1). However

• , the yield of BPP decreased to 40% when the amount of 1 was increased to 1.0 g with a concentration of 2.6 mM (Table 1, entry 2). In our attempt to improve the yield of BPP 2, we decreased the equivalent of SnCl2·2H2O and increased the volume ratio of iPrOH, which unexpectedly provided BPP-OiPr 3 as a

Three-component reactions of conjugated dienes, CH acids and formaldehyde under diffusion mixing conditions

• Dmitry E. Shybanov,
• Maxim E. Kukushkin,
• Eugene V. Babaev,
• Nikolai V. Zyk and
• Elena K. Beloglazkina

Beilstein J. Org. Chem. 2025, 21, 262–269, doi:10.3762/bjoc.21.18

• method was successfully used to generate highly active nitrile oxides and nitrilimines for 1,3-dipolar cycloaddition reactions [19][20][21]. Based on our previous experience with diffusion mixing, we assumed that formaldehyde vapor diffusion into the reaction would lead to an extremely low concentration

• placed an open small vial with a solution of the other starting compounds (Figure 1). During the reaction, formaldehyde vapors from the outer vial were slowly absorbed by the mixture in the inner vial, which ensured an extremely low concentration of CH2O and intermediates in the reaction. An alternative

Synthesis of disulfides and 3-sulfenylchromones from sodium sulfinates catalyzed by TBAI

• Zhenlei Zhang,
• Ying Wang,
• Xingxing Pan,
• Manqi Zhang,
• Wei Zhao,
• Meng Li and
• Hao Zhang

Beilstein J. Org. Chem. 2025, 21, 253–261, doi:10.3762/bjoc.21.17

• the reaction, an attempt was made to increase the concentration, reducing the amount of solvent to 1 mL (Table 1, entry 12), product 2a was obtained in 67%, and a further reduction to 0.5 mL failed to increase the yield significantly (Table 1, entry 13). Although the amount of solvent used could have

Hydrogen-bonded macrocycle-mediated dimerization for orthogonal supramolecular polymerization

• Wentao Yu,
• Zhiyao Yang,
• Chengkan Yu,
• Xiaowei Li and
• Lihua Yuan

Beilstein J. Org. Chem. 2025, 21, 179–188, doi:10.3762/bjoc.21.10

• polymerization concentration of 17 μM. These polymers were highly concentration-dependent. Establishing this new dimerization motif with shape-persistent H-bonded macrocycles widens the scope of noncovalent building blocks for supramolecular polymers and augurs well for the future development of functional

• H1, G2, and Zn2+ with a respective concentration of 1 mM and 3 mM revealed a nanoglobular suprastructure, and a larger nanoirregular block suprastructure at higher concentration (5 mM, Figure 5). To confirm aggregate formation, 1H NMR titration experiments were carried out, in which different equiv

• addition of the macrocycle to a G2/Zn2+ complex were consistent with the formation of supramolecular polymers. The supramolecular polymers formed were further characterized by viscosity and variable-concentration NMR experiments. One important feature of supramolecular polymers is the dependency of their

Hot shape transformation: the role of PSar dehydration in stomatocyte morphogenesis

• Remi Peters,
• Levy A. Charleston,
• Karinan van Eck,
• Teun van Berlo and
• Daniela A. Wilson

Beilstein J. Org. Chem. 2025, 21, 47–54, doi:10.3762/bjoc.21.5

• solute concentration proved ineffective; an alternative approach was needed. Examining the van 't Hoff equation for osmotic pressure, Π = iMRT, four factors play significant roles: solute concentration M (in this case, PEG), the van 't Hoff constant i (which is 1 for non-dissociating molecules

• ), temperature T, and the ideal gas constant R. Increasing the temperature can enhance osmotic pressure, similar to solute concentration. This equation does not directly include membrane permeability as it only relates the osmotic pressure to temperature and concentration. However, membrane permeability

• indirectly affects osmotic pressure difference over the membrane. Permeability influences the concentration gradient of solute particles across the membrane [21], meaning that in this case membrane permeability affects the osmotic pressure that can be exerted on the membrane. Dehydrating polysarcosine by

Emerging trends in the optimization of organic synthesis through high-throughput tools and machine learning

• Pablo Quijano Velasco,
• Kedar Hippalgaonkar and
• Balamurugan Ramalingam

Beilstein J. Org. Chem. 2025, 21, 10–38, doi:10.3762/bjoc.21.3

• . Using this configuration, the platform can perform a calibration of the reagent and product concentration through a standard addition method. Once the PAT is calibrated, the platform performs dynamic experiments where the concentration of the reagents is ramped to explore the parametric space. Finally

• to maximize the space–time yield (STY) while minimizing either the E-factor of the SNAr reaction or the impurity concentration of the N-benzylation reaction. For both reactions, there were four variables to optimize, including metrics for reaction time, reagent concentration, and temperature. After