Synthetic approach to borrelidin fragments: focus on key intermediates

• Yudhi Dwi Kurniawan,
• Zetryana Puteri Tachrim,
• Teni Ernawati,
• Faris Hermawan,
• Ima Nurasiyah and
• Muhammad Alfin Sulmantara

Beilstein J. Org. Chem. 2025, 21, 1135–1160, doi:10.3762/bjoc.21.91

• acetate functionality using potassium carbonate in methanol, followed by reaction with tosyl chloride in pyridine and DMAP. The product, ent-43, was obtained in 79.5% yield over three steps. This compound was reduced using LiAlH4 and treated with TBAF to remove the TBDMS group, yielding alcohol ent-40 in

• iodide, and subsequent nucleophilic substitution with deprotonated (R,R)-91. The introduction of the OPMB functionality in compound 88 could then be achieved by following the steps employed in the transformation of 84 to 83. The synthesis via route A began with efforts to optimize the epimerization of

• functionality of 87 was reduced to the corresponding primary alcohol with DIBAL-H and converted to the iodide derivative using Ph3P/I2/imidazole reagents. The resulting iodide was treated with lithiated (R,R)-91 to afford compound 86 in a 76% yield with excellent diastereoselectivity (>99:1 dr). Finally

Investigations of amination reactions on an antimalarial 1,2,4-triazolo[4,3-a]pyrazine scaffold

• Henry S. T. Smith,
• Ben Giuliani,
• Kanchana Wijesekera,
• Kah Yean Lum,
• Sandra Duffy,
• Aaron Lock,
• Jonathan M. White,
• Vicky M. Avery and
• Rohan A. Davis

Beilstein J. Org. Chem. 2025, 21, 1126–1134, doi:10.3762/bjoc.21.90

• -position (tele-substituted; Figure 1), distant from the halogen leaving group at position 5 [10]. A plausible reaction mechanism was proposed by Korsik et al. [10]. The antimalarial activity of series 4 triazolopyrazine scaffolds is generally reduced by substitution of an amine functionality at the 8

Recent total synthesis of natural products leveraging a strategy of enamide cyclization

• Chun-Yu Mi,
• Jia-Yuan Zhai and
• Xiao-Ming Zhang

Beilstein J. Org. Chem. 2025, 21, 999–1009, doi:10.3762/bjoc.21.81

• , the terminal alkene remains intact during this process, and the initial protonation proceeds with full stereocontrol, rendering this transformation both highly chemo- and diastereoselective. From the cyclization result, it is presumed that the higher nucleophilicity of the alkyne functionality over

Silver(I) triflate-catalyzed post-Ugi synthesis of pyrazolodiazepines

• Muhammad Hasan,
• Anatoly A. Peshkov,
• Syed Anis Ali Shah,
• Andrey Belyaev,
• Chang-Keun Lim,
• Shunyi Wang and
• Vsevolod A. Peshkov

Beilstein J. Org. Chem. 2025, 21, 915–925, doi:10.3762/bjoc.21.74

• scaffolds (Scheme 6) [64][65]. First, we attempted heterogeneous hydrogenation of the alkene functionality in compound 16a under 1 atm hydrogen pressure using Pd/C as a catalyst. Although the reaction proved sluggish, we were able to drive it to completion over a prolonged reaction time of 14 days

Cu–Bpin-mediated dimerization of 4,4-dichloro-2-butenoic acid derivatives enables the synthesis of densely functionalized cyclopropanes

• Patricia Gómez-Roibás,
• Andrea Chaves-Pouso and
• Martín Fañanás-Mastral

Beilstein J. Org. Chem. 2025, 21, 877–883, doi:10.3762/bjoc.21.71

• the copper–boron bond into 1. The dual functionality of this substrate imposed a question related to the regioselectivity of the Cu–Bpin insertion since it can potentially behave as an α,β-unsaturated ester or an allylic substrate [16][17][18][19]. To shed some light into this issue, we ran the

Data accessibility in the chemical sciences: an analysis of recent practice in organic chemistry journals

• Sally Bloodworth,
• Cerys Willoughby and
• Simon J. Coles

Beilstein J. Org. Chem. 2025, 21, 864–876, doi:10.3762/bjoc.21.70

• repository that would provide specialist functionality, such as structure searching, to facilitate discovery for other chemists. We conclude that recommending (not mandating) repository deposition does not encourage data sharing. Interestingly, Eur. J. Org. Chem. 'expects’ that the data supporting the

Origami with small molecules: exploiting the C–F bond as a conformational tool

• Patrick Ryan,
• Ramsha Iftikhar and
• Luke Hunter

Beilstein J. Org. Chem. 2025, 21, 680–716, doi:10.3762/bjoc.21.54

• nearby functionality [110]. Second, if the hydroxy group becomes protonated under acidic conditions, the gauche +O–C–C–F conformation becomes dramatically more favoured over anti (e.g., energy difference between gauche and anti = 7.2 kcal·mol−1). This is due to a new charge-dipole phenomenon (IV, Figure

Asymmetric synthesis of fluorinated derivatives of aromatic and γ-branched amino acids via a chiral Ni(II) complex

• Maurizio Iannuzzi,
• Thomas Hohmann,
• Michael Dyrks,
• Kilian Haoues,
• Katarzyna Salamon-Krokosz and
• Beate Koksch

Beilstein J. Org. Chem. 2025, 21, 659–669, doi:10.3762/bjoc.21.52

• synthesis of alkyl iodides was investigated. A tosylate functionality was employed as a leaving group in the iodination reaction. Finally, the desired fluorinated tosylate 9 could be isolated on a gram-scale in a moderate yield of 27% (Scheme 3a). Subsequently, the iodination of the tosylate has been

Photocatalyzed elaboration of antibody-based bioconjugates

• Marine Le Stum,
• Eugénie Romero and
• Gary A. Molander

Beilstein J. Org. Chem. 2025, 21, 616–629, doi:10.3762/bjoc.21.49

• contains four un-buried interchain disulfide bonds. Thus, rebridging allows the disulfide bonds to be reformed after conjugation, but one may question whether this could affect the long-term stability or functionality of the ADC, particularly if the new bonds do not perfectly mimic the properties of native

• conditions can lead to denaturation, aggregation, or loss of functionality. Buffers, which are commonly used to stabilize antibodies by maintaining their pH and ionic strength, must also be compatible with the photoredox process to prevent unwanted side reactions or instability. Thus, although photoredox

• chemistry offers a promising method for the targeted modification of antibodies, careful consideration of factors such as photoaggregation, reaction time, and aqueous media compatibility is essential to ensure the stability, efficacy, and functionality of the conjugated biomolecules. Conclusion In

Binding of tryptophan and tryptophan-containing peptides in water by a glucose naphtho crown ether

• Gianpaolo Gallo and
• Bartosz Lewandowski

Beilstein J. Org. Chem. 2025, 21, 541–546, doi:10.3762/bjoc.21.42

• binds free tryptophan selectively in aqueous media. Furthermore, it is capable of binding to tryptophan within model tripeptides. The naphthalene functionality in the glucose-derived receptor enables the study of guest binding using fluorescence spectroscopy. Keywords: amino acids; macrocyclic

Synthesis of N-acetyl diazocine derivatives via cross-coupling reaction

• Thomas Brandt,
• Pascal Lentes,
• Jeremy Rudtke,
• Michael Hösgen,
• Christian Näther and
• Rainer Herges

Beilstein J. Org. Chem. 2025, 21, 490–499, doi:10.3762/bjoc.21.36

• of amino-N-acetyl diazocine by deprotection of the carbamate. Reaction conditions for the attempted Ullmann-type reaction with sodium azide. Reaction conditions for the palladium-catalyzed introduction of a nitrile functionality. Quantum yields of N-acetyl diazocine 1 in organic and aqueous media

Beyond symmetric self-assembly and effective molarity: unlocking functional enzyme mimics with robust organic cages

• Keith G. Andrews

Beilstein J. Org. Chem. 2025, 21, 421–443, doi:10.3762/bjoc.21.30

• demonstrating enzyme-like rate accelerations remain rare. This perspective will briefly highlight some of the key advances in traditional cavity catalysis, by cavity type, in order to contextualize the recent development of robust organic cage catalysts, which can exploit stability, functionality, and reduced

• are linear molecules able to direct functionality toward each other in a relatively rigid pincer orientation. One example featuring a pair of antipodal carboxylic acids demonstrated acetal hydrolysis catalysis (Figure 3B) [110]. However, as linear molecules, the clefts are difficult to develop past

• fixed 2D orientations. Envious of the contemporary progress of catalytic antibodies, Rebek lamented the slow progress in these systems, concluding: if catalytically useful functionality can be introduced…[to the antibodies] …model systems such as ours may become the dinosaurs of the 1990s [108

The effect of neighbouring group participation and possible long range remote group participation in O-glycosylation

• Rituparna Das and
• Balaram Mukhopadhyay

Beilstein J. Org. Chem. 2025, 21, 369–406, doi:10.3762/bjoc.21.27

• neighbouring group participation for the formation of the acetoxonium ion intermediate was more favourable in the locked systems like o-substituted benzoyl groups instead of aliphatic protections. Many protecting groups have been developed for the protection of the amine functionality of nucleosides like 2

• -(benzoyloxymethyl)benzoyl [89] and 2-[(tert-butyldiphenylsilyloxy)methyl]benzoyl [90] among others. Sekine and co-workers developed the 2-(azidomethyl)benzoyl (AZMB) group for protecting the hydroxy groups and the exo-amino functionality of the nucleosides [91]. Despite their disarming nature, Iadonisi et al

• the C-2 position also contribute to the concept of ‘armed–disarmed’ glycosylation wherein C-2 ether-protected ‘armed’ thioglycosides were selectively activated over C-2 ester-protected ‘disarmed’ thioglycosides owing to the electron-withdrawing attribute of the ester carbonyl functionality [93

Synthesis, characterization, antimicrobial, cytotoxic and carbonic anhydrase inhibition activities of multifunctional pyrazolo-1,2-benzothiazine acetamides

• Ayesha Saeed,
• Shahana Ehsan,
• Muhammad Zia-ur-Rehman,
• Erin M. Marshall,
• Sandra Loesgen,
• Abdus Saleem,
• Simone Giovannuzzi and
• Claudiu T. Supuran

Beilstein J. Org. Chem. 2025, 21, 348–357, doi:10.3762/bjoc.21.25

• evolves [3]. Complex chemical scaffolds with more than one protein-engaging functionality in a single molecule are advantageous for selectivity. This concept of synergistic compounds and complex chemical interactions helps to boost biological activity and prolongs the emergence of resistance in pathogens

Emerging trends in the optimization of organic synthesis through high-throughput tools and machine learning

• Pablo Quijano Velasco,
• Kedar Hippalgaonkar and
• Balamurugan Ramalingam

Beilstein J. Org. Chem. 2025, 21, 10–38, doi:10.3762/bjoc.21.3

• the functionality of an individual reactor. This segmentation ensures precise control over reactions and prevents interference between different reaction environments. Moreover, the ratio of reagents within these droplets is easily modulated using syringe pumps, providing users with a convenient means

Giese-type alkylation of dehydroalanine derivatives via silane-mediated alkyl bromide activation

• Perry van der Heide,
• Michele Retini,
• Fabiola Fanini,
• Giovanni Piersanti,
• Francesco Secci,
• Daniele Mazzarella,
• Timothy Noël and
• Alberto Luridiana

Beilstein J. Org. Chem. 2024, 20, 3274–3280, doi:10.3762/bjoc.20.271

• derivatives, a tertiary amide was firstly used to exclude selectivity issues arising from the hydrogen atoms of the amide functionality, yielding compound 23 in synthetically useful yield (39%). Interestingly, a secondary amide was formed in a higher yield of compound 24 (62%) compared to a Dha with a

Discovery of ianthelliformisamines D–G from the sponge Suberea ianthelliformis and the total synthesis of ianthelliformisamine D

• Sasha Hayes,
• Yaoying Lu,
• Bernd H. A. Rehm and
• Rohan A. Davis

Beilstein J. Org. Chem. 2024, 20, 3205–3214, doi:10.3762/bjoc.20.266

• integrated for three protons and a triplet (δH 8.23) that were indicative of a protonated terminal amino group and a secondary amide functionality, respectively [7]. 13C NMR shifts and COSY correlations associated with the methylene signals of 7 enabled the assignment of an NH–(CH2)3–NH2 moiety, which was

Multicomponent reactions driving the discovery and optimization of agents targeting central nervous system pathologies

• Lucía Campos-Prieto,
• Aitor García-Rey,
• Eddy Sotelo and
• Ana Mallo-Abreu

Beilstein J. Org. Chem. 2024, 20, 3151–3173, doi:10.3762/bjoc.20.261

• this study, they employed the Bucherer–Bergs reaction, a versatile multicomponent reaction which enables the formation of a hydantoin that represents a masked amino acid functionality (Scheme 21). After subsequent saponification and acidification, the desired compound crystallizes along with impurities

Enantioselective regiospecific addition of propargyltrichlorosilane to aldehydes catalyzed by biisoquinoline N,N’-dioxide

• Noble Brako,
• Sreerag Moorkkannur Narayanan,
• Amber Burns,
• Layla Auter,
• Valentino Cesiliano,
• Rajeev Prabhakar and
• Norito Takenaka

Beilstein J. Org. Chem. 2024, 20, 3069–3076, doi:10.3762/bjoc.20.255

• ; Introduction Enantioenriched α-allenic alcohols are an important class of chiral building blocks used for the chemical synthesis of biologically relevant molecules [1][2][3][4][5]. Their strength comes from the rich synthetic versatility [6][7][8][9] and biological relevance [10] of the allene functionality

Advances in radical peroxidation with hydroperoxides

• Oleg V. Bityukov,
• Pavel Yu. Serdyuchenko,
• Andrey S. Kirillov,
• Gennady I. Nikishin,
• Vera A. Vil’ and
• Alexander O. Terent’ev

Beilstein J. Org. Chem. 2024, 20, 2959–3006, doi:10.3762/bjoc.20.249

• development of efficient synthetic approaches to implement organic peroxide functionality in various substrates is a timely task. From the synthetic point of view, organic peroxides are one of the best sources of oxygen atoms for a variety of oxygenation reactions [6]. Hydroperoxides (especially TBHP), acyl

Structure and thermal stability of phosphorus-iodonium ylids

• Andrew Greener,
• Stephen P. Argent,
• Coby J. Clarke and
• Miriam L. O’Duill

Beilstein J. Org. Chem. 2024, 20, 2931–2939, doi:10.3762/bjoc.20.245

• enable access to chemical motifs that are difficult to synthesise using traditional approaches. However, gaps remain in the functionality they can transfer. Specifically, unstabilised alkyl groups are still underrepresented. For the development of new hypervalent iodine reagents to bridge this gap, it is

The charge transport properties of dicyanomethylene-functionalised violanthrone derivatives

• Sondos A. J. Almahmoud,
• Joseph Cameron,
• Dylan Wilkinson,
• Michele Cariello,
• Claire Wilson,
• Alan A. Wiles,
• Peter J. Skabara and
• Graeme Cooke

Beilstein J. Org. Chem. 2024, 20, 2921–2930, doi:10.3762/bjoc.20.244

• , and a λmax at 701 nm with ε of 4.69 × 104 L mol−1 cm−1 which might lead to the contribution of 3b to the photocurrent. All previous studies suggested that violanthrone and its derivatives display electronic functionality and could be potentially used in organic electronics. Nevertheless, to the best

Investigation of a bimetallic terbium(III)/copper(II) chemosensor for the detection of aqueous hydrogen sulfide

• Parvathy Mini,
• Michael R. Grace,
• Genevieve H. Dennison and
• Kellie L. Tuck

Beilstein J. Org. Chem. 2024, 20, 2818–2826, doi:10.3762/bjoc.20.237

• proposed to function by Cu2+ sequestration. The remaining report is of a terbium(III) complex [Tb(DPA-N3)3]3− (Figure 7), which contains an aryl azide-functionalized ligand. In this system the azide functionality prohibits the energy transfer to the lanthanide ion, effectively quenching luminescence. In

• the presence of gaseous hydrogen sulfide, the aryl azide is reduced to an aniline functionality and luminescence is restored [11]. Drawing our previous findings and insights from the work of Hou, Wu, and co-workers [21], we postulate that gaseous H2S is interacting with the [Tb.1·3Cu]3+ complex as it

Applications of microscopy and small angle scattering techniques for the characterisation of supramolecular gels

• Connor R. M. MacDonald and
• Emily R. Draper

Beilstein J. Org. Chem. 2024, 20, 2608–2634, doi:10.3762/bjoc.20.220

• -assembly across many length scales (Figure 1), allowing for the control of properties through not only chemical modifications on the monomer, but also changes to the gelation process [2]. Whilst this tunability is advantageous in that it allows for a wide range of functionality and applications, this also

Asymmetric organocatalytic synthesis of chiral homoallylic amines

• Nikolay S. Kondratyev and
• Andrei V. Malkov

Beilstein J. Org. Chem. 2024, 20, 2349–2377, doi:10.3762/bjoc.20.201

• , that the 2-aminophenol functionality in the substrates is a prerequisite for attaining high enantioselectivity in the allylation. Interestingly, the aldimines synthesised from 2-hydroxy-4-methylaniline produced inferior yields. While the N-aryl homoallylic amines 66 can be useful intermediates in total