Synthesis and solvodynamic diameter measurements of closely related mannodendrimers for the study of multivalent carbohydrate–protein interactions

• Yoann M. Chabre,
• Alex Papadopoulos,
• Alexandre A. Arnold and
• René Roy

Beilstein J. Org. Chem. 2014, 10, 1524–1535, doi:10.3762/bjoc.10.157

• 9-mer 12, 17, and 21 were determined by pulsed-field-gradient-stimulated echo (PFG-STE) NMR experiments and were found to be 3.0, 2.5, and 3.4 nm, respectively. Keywords: carbohydrates; click chemistry; dendrimers; glycodendrimers; lectins; multivalent glycosystems; Introduction Multivalent

• signal (3H) at δ 4.81 ppm and corresponding HRMS data. Zemplén deprotection (NaOMe, MeOH) afforded 5 in 94% yield. Synthesis of the related homolog 9, prepared in 74% overall yield from known 6 [17] by an analogous click chemistry, is also described in Scheme 1. To this end, trichloride 1 was treated as

• -products together with a better assessment of complete surface group modifications. Hence, known 14 [36] was first cycloadded to mannosylazide 3 under the above CuAAc conditions. The “click reaction” proceeded exceptionally efficiently and provided bromoacylated dendron precursor 18 in 94% yield

Pyrene-modified PNAs: Stacking interactions and selective excimer emission in PNA₂DNA triplexes

• Alex Manicardi,
• Lucia Guidi,
• Alice Ghidini and
• Roberto Corradini

Beilstein J. Org. Chem. 2014, 10, 1495–1503, doi:10.3762/bjoc.10.154

• click chemistry or as a masked amino group both in a PNA monomer and in PNA oligomers, allowing to produce a variety of modified PNAs from a single precursor [35]. This chemistry introduces a moderate degree of flexibility which can be useful for allowing interactions with other groups to occur within

Multichromophoric sugar for fluorescence photoswitching

• Stéphane Maisonneuve,
• Rémi Métivier,
• Pei Yu,
• Keitaro Nakatani and
• Juan Xie

Beilstein J. Org. Chem. 2014, 10, 1471–1481, doi:10.3762/bjoc.10.151

• photo resistance. Keywords: click chemistry; energy transfer; fluorophore; monosaccharide; photochromism; Introduction The development of functional nanomaterials is nowadays a very attractive field of fundamental and applied research. The chemical functions at the molecular level yield properties

• because sophisticated multistep experimental procedures are often implicated. Recently, the Cu(I)-catalyzed alkyne–azide cycloaddition reaction (CuAAC, an excellent example of click chemistry) has been demonstrated as a robust and highly efficient ligation tool to conjugate various azido- and alkyne

• -functionalized moieties [18][19][20]. Monosaccharides can be readily functionalized with several propargyl groups to synthesize, using click chemistry, multivalent neoglycoconjugates for recognition studies with carbohydrate-binding proteins (lectins) [21][22][23][24] or to develop light-harvesting antenna

Carbohydrate PEGylation, an approach to improve pharmacological potency

• M. Eugenia Giorgi,
• Rosalía Agusti and
• Rosa M. de Lederkremer

Beilstein J. Org. Chem. 2014, 10, 1433–1444, doi:10.3762/bjoc.10.147

• increase solubility [8], prolong the in vivo action [9] or for targeting drug delivery [10] has been described. The potent anti-inflammatory drug dexamethasone was coupled to a multifunctional PEG, prepared by a click reaction, for treatment of rheumatoid arthritis [11]. A heterobifunctional PEG has been

• -caprolactone for targeting dendritic cells and macrophages (Figure 4) [45] Both mannose and galactose were attached to PEGylated nanoparticles by click-chemistry between their propargyl glycosides and a gold nanoparticles derivatized with an azide-functionalized PEG [46]. Also, several unprotected carbohydrate

• units of mannose, fucose or lactose, have been incorporated into the surface of PEGylated dendritic polymers by means of click chemistry. The larger dendrimer generations have demonstrated an increased capacity to aggregate lectins [47]. Analogs of lactose have been reported as inhibitors of the enzyme

Synthesis of the first examples of iminosugar clusters based on cyclopeptoid cores

• Mathieu L. Lepage,
• Alessandra Meli,
• Anne Bodlenner,
• Céline Tarnus,
• Francesco De Riccardis,
• Irene Izzo and
• Philippe Compain

Beilstein J. Org. Chem. 2014, 10, 1406–1412, doi:10.3762/bjoc.10.144

• context cyclopeptoids 2–4 appear as ideal building blocks because of their simplicity of synthesis and easy functionalization by click reaction (Figure 1). In the present paper, we report the synthesis of the first examples of cyclopeptoid-based iminosugar clusters. The influence of valency, size, linker

• stages of the DNJ cluster synthesis were based on a robust two-step process, recently developed in our group for the preparation of iminosugar click clusters [4][5][9][10][11]. The first step of the process involved the attachment of peracetylated azido iminosugars 5 [4] onto polyalkyne scaffolds 2–4 by

• . The 1H signals were assigned by 2D experiments (COSY). ESI–HRMS mass spectra were carried out on a Bruker MicroTOF spectrometer. Purifications were performed with silica gel 60 (230–400 mesh, 0.040–0.063 mm). General procedure for the synthesis of cyclopeptoid-based iminosugar click clusters 9a–f To a

A complete series of 6-deoxy-monosubstituted tetraalkylammonium derivatives of α-, β-, and γ-cyclodextrin with 1, 2, and 3 permanent positive charges

• Martin Popr,
• Simona Hybelbauerová and
• Jindřich Jindřich

Beilstein J. Org. Chem. 2014, 10, 1390–1396, doi:10.3762/bjoc.10.142

• Huisgen 1,3-dipolar cycloaddition [30] (most popular ‘click reaction’) or the reduction to the amine. Our strategy involved the synthesis of the alkylation agent 1-azido-2-iodoethane (24) (Scheme 5) which would be used for the quaternization of the tertiary amine intermediate. The reaction sequence for

An economical and safe procedure to synthesize 2-hydroxy-4-pentynoic acid: A precursor towards ‘clickable’ biodegradable polylactide

• Quanxuan Zhang,
• Hong Ren and
• Gregory L. Baker

Beilstein J. Org. Chem. 2014, 10, 1365–1371, doi:10.3762/bjoc.10.139

• onto polymers from a single monomer via convenient ‘click’ chemistry with organic azides. The incorporation of various pendant functional groups could effectively tailor the physicochemical properties of polylactide. The reported synthesis of 1 started from propargyl bromide and ethyl glyoxylate

• hydroxylation of propargylic malonate 5 without work-up of any intermediate. Keywords: alkylation; ‘click’ chemistry; ‘clickable’ polylactide; decomposition; diethyl 2-acetamidomalonate; 2-hydroxy-4-pentynoic acid; one-pot; optimization; propargyl bromide; propargyl tosylate; safe and economical; Introduction

• groups onto polymers via convenient ‘click’ reaction with organic azido molecules without PLA backbone degradation [17]. ‘Click’ chemistry [20], which is copper(I)-catalyzed 1,3-dipolar cycloaddition of azides and alkynes, has been developed and utilized in recent years as a powerful synthetic strategy

Molecular recognition of surface-immobilized carbohydrates by a synthetic lectin

• Melanie Rauschenberg,
• Eva-Corrina Fritz,
• Christian Schulz,
• Tobias Kaufmann and
• Bart Jan Ravoo

Beilstein J. Org. Chem. 2014, 10, 1354–1364, doi:10.3762/bjoc.10.138

• -terminated SAMs [33], by Diels–Alder reaction of cyclopentadienes and furans on maleimide-terminated SAMs [34], by thiol–ene click reaction of functionalized thiols on alkene-terminated SAMs [35] as well as by strain promoted cycloadditions on azide- and nitriloxide-terminated SAMs [36] using μCP. Homogenous

Design and synthesis of multivalent neoglycoconjugates by click conjugations

• Feiqing Ding,
• Li Ji,
• Ronny William,
• Hua Chai and
• Xue-Wei Liu

Beilstein J. Org. Chem. 2014, 10, 1325–1332, doi:10.3762/bjoc.10.134

• hydroamination/glycosylation on glycal scaffolds has been developed to form propargyl 3-tosylamino-2,3-dideoxysugars in a one-pot manner. Subsequent construction of multivalent 3-tosylamino-2,3-dideoxyneoglycoconjugates with potential biochemical applications was presented herein involving click conjugations as

• the key reaction step. The copper-catalyzed regioselective click reaction was tremendously accelerated with assistance of microwave irradiation. Keywords: click conjugations; copper-catalyzed; microwave irradiation; multivalent glycosystems; neoglycoconjugates; one-pot; Introduction Oligosaccharides

• ]. Moreover, the inertness of both azide and alkyne groups towards a majority of functional groups connected to the core of a variety of biomolecules also renders the click reaction particularly suitable for covalently linking bioactive molecular entities [21][22]. For example, the click strategy is

Synthesis, characterization and DNA interaction studies of new triptycene derivatives

• Sourav Chakraborty,
• Snehasish Mondal,
• Rina Kumari,
• Sourav Bhowmick,
• Prolay Das and
• Neeladri Das

Beilstein J. Org. Chem. 2014, 10, 1290–1298, doi:10.3762/bjoc.10.130

• various interesting applications in organic chemistry [9][10][11] as well as material science [12][13][14][15] and drug discovery [16][17][18]. Organic azides in general are popular in recent times because of their use as synthons in Cu(I)-catalyzed “click chemistry” [19]. It is also well known that

Automated solid-phase peptide synthesis to obtain therapeutic peptides

• Veronika Mäde,
• Sylvia Els-Heindl and
• Annette G. Beck-Sickinger

Beilstein J. Org. Chem. 2014, 10, 1197–1212, doi:10.3762/bjoc.10.118

• obtain the desired polypeptide. The condensation can occur via chemoselective ligation techniques such as native chemical ligation (NCL), expressed protein ligation (EPL), Staudinger ligation or click reaction [8][79]. Recently, peptide drugs as the pharmaceuticals Enfuvirtide, Eptifibitide and

Atherton–Todd reaction: mechanism, scope and applications

• Stéphanie S. Le Corre,
• Mathieu Berchel,
• Hélène Couthon-Gourvès,
• Jean-Pierre Haelters and
• Paul-Alain Jaffrès

Beilstein J. Org. Chem. 2014, 10, 1166–1196, doi:10.3762/bjoc.10.117

Staudinger ligation towards cyclodextrin dimers in aqueous/organic media. Synthesis, conformations and guest-encapsulation ability

• Malamatenia D. Manouilidou,
• Yannis G. Lazarou,
• Irene M. Mavridis and
• Konstantina Yannakopoulou

Beilstein J. Org. Chem. 2014, 10, 774–783, doi:10.3762/bjoc.10.73

• . These include the well-known copper-catalyzed azide–alkyne cyclization (CuAAC, “click” reaction) between an azido-CD derivative and an alkyne linker [19][22][23][24] [22], or vice versa, the metal catalyzed reactions between propargyl-CDs and aryl dihalides such as the Sonogashira and Glaser–Hay

Polyglycerol-functionalized nanodiamond as a platform for gene delivery: Derivatization, characterization, and hybridization with DNA

• Li Zhao,
• Yuki Nakae,
• Hongmei Qin,
• Tadamasa Ito,
• Takahide Kimura,
• Hideto Kojima,
• Lawrence Chan and
• Naoki Komatsu

Beilstein J. Org. Chem. 2014, 10, 707–713, doi:10.3762/bjoc.10.64

• (tosylate) → –N3) in the PG layer, and click conjugation of the basic polypeptides (Arg8, Lys8 or His8) terminated with propargyl glycine. The ND-PG-BPP exhibited good dispersibility in water (>1.0 mg/mL) and positive zeta potential ranging from +14.2 mV to +44.1 mV at neutral pH in Milli-Q water. It was

• confirmed by gel retardation assay that ND-PG-Arg8 and ND-PG-Lys8 with higher zeta potential hybridized with plasmid DNA (pDNA) through electrostatic attraction, making them promising as nonviral vectors for gene delivery. Keywords: carbon-nanomaterials; click chemistry; DNA; gene delivery; nanodiamond

• , Lys8 and His8) through click chemistry followed by hybridization with plasmid DNA (pDNA) and its characterization by electrophoresis is reported. Results and Discussion Preparation and characterization of ND50-PG In view of actual cancer therapy utilizing the enhanced permeation and retention (EPR

End-group-functionalized poly(N,N-diethylacrylamide) via free-radical chain transfer polymerization: Influence of sulfur oxidation and cyclodextrin on self-organization and cloud points in water

• Sebastian Reinelt,
• Daniel Steinke and
• Helmut Ritter

Beilstein J. Org. Chem. 2014, 10, 680–691, doi:10.3762/bjoc.10.61

• agents [23][24][25] or (b) indirect by polymer analogous modification of existing end-groups. For the post-modification highly efficient reactions are needed to ensure a high degree of functionalization. For this reason, often “click reactions” [26] such as esterifications [27], azide–alkyne [22], thiol

Isocyanide-based multicomponent reactions towards cyclic constrained peptidomimetics

• Gijs Koopmanschap,
• Eelco Ruijter and
• Romano V.A. Orru

Beilstein J. Org. Chem. 2014, 10, 544–598, doi:10.3762/bjoc.10.50

• ]. Multicomponent reactions towards amide isosteres often involve an Ugi reaction followed by a Click reaction, in which two of the Ugi-inputs either contain an alkyne or an azide moiety. A well-known example of the latter reaction is the Copper(I) catalyzed azide–alkyne cycloaddition (CuAAC) between acetylenes and

• -isomer over the 1,5-isomer [85]. In 2010, Nenajdenko et al. described an Ugi/Click-approach using chiral isocyanoazides, which in turn were derived from L-amino alcohols [85]. The Ugi-products were obtained in good yields, with high diastereoselectivity (de >99%). A follow-up Click reaction using 10 mol

• and anticancer activities [88]. The Ugi reaction provided the azide moieties 84a or 84b, whereas a reaction between sodium acetylide and imines of general structure 86 afforded the alkyne derivatives [89][90]. A subsequent Click reaction gave the final triazole-mimics (88a or 88b) in good to excellent

Preparation of new alkyne-modified ansamitocins by mutasynthesis

• Kirsten Harmrolfs,
• Lena Mancuso,
• Binia Drung,
• Florenz Sasse and
• Andreas Kirschning

Beilstein J. Org. Chem. 2014, 10, 535–543, doi:10.3762/bjoc.10.49

• ; antitumor agents; click chemistry; mutasynthesis; natural products; Introduction Although natural products and analogues cover a large portion of the drug market particularly in the treatment of cancer as well as bacterial and viral infections their role in pharmaceutical research has decreased over the

• cycloadditions better known as “copper mediated Click-chemistry” while alkenes, especially vinyl- and allylbenzoic systems, are predestined for being utilized in cross metathesis reactions. Therefore a series of aminobenzoic acids 9–20 (Figure 1) were prepared (see Supporting Information File 1). We expected

• antiproliferative activity of the “click” product 27c is remarkable as it demonstrates that substantial structural changes at C20 of the ansamitocins are tolerated and thus alkyne substituents open up diverse opportunities to diversify that position as reported including the introduction of tumor targeting ligands

Silver and gold-catalyzed multicomponent reactions

• Giorgio Abbiati and
• Elisabetta Rossi

Beilstein J. Org. Chem. 2014, 10, 481–513, doi:10.3762/bjoc.10.46

• without a significant loss of its catalytic activity. Similar PS–NHC–silver complexes were recently prepared via click-chemistry, and their aptitude to catalyze A3-coupling was verified [13]. The suitability of NHC–Ag(I) complexes as catalysts for A3-coupling MCR was confirmed, and independently developed

Synthesis of new enantiopure poly(hydroxy)aminooxepanes as building blocks for multivalent carbohydrate mimetics

• Léa Bouché,
• Maja Kandziora and
• Hans-Ulrich Reissig

Beilstein J. Org. Chem. 2014, 10, 213–223, doi:10.3762/bjoc.10.17

• reduction of the carbonyl group [43] and TBS cleavage, propargylic ether 18 was obtained (88% yield over two steps) [44]. The alkyne moiety provides options for further transformations, e.g. Sonogashira reactions, Glaser couplings or 1,3-dipolar cycloadditions (click reactions) [45]. We were also interested

• such as alkynyl or azido substituents at the bicyclic skeleton will also allow further transformations such as click reactions or palladium-catalyzed couplings. We expect that the newly prepared aminooxepanes or their multivalent conjugates will have interesting properties and possibly biological

Synthesis and biological activity of N-substituted-tetrahydro-γ-carbolines containing peptide residues

• Nadezhda V. Sokolova,
• Valentine G. Nenajdenko,
• Vladimir B. Sokolov,
• Daria V. Vinogradova,
• Elena F. Shevtsova,
• Ludmila G. Dubova and
• Sergey O. Bachurin

Beilstein J. Org. Chem. 2014, 10, 155–162, doi:10.3762/bjoc.10.13

• has been performed using the sequence of the Ugi multicomponent reaction and Cu(I)-catalyzed click chemistry. The effect of obtained γ-carboline–peptide conjugates on the rat liver mitochondria was evaluated. It was found that all compounds in the concentration of 30 µM did onot induce depolarization

• )-catalyzed click chemistry – one of the most effective conjugation methods [21][22]. Thus, heating the educts with Cu(II)/sodium ascorbate in a biphasic mixture of CH2Cl2/H2O during 1 h provided compounds 6a–g (Scheme 3). According to the 13C NMR spectra, the click reaction proceeds regioselective in all

Silica: An efficient catalyst for one-pot regioselective synthesis of dithioethers

• Samir Kundu,
• Babli Roy and
• Basudeb Basu

Beilstein J. Org. Chem. 2014, 10, 26–33, doi:10.3762/bjoc.10.5

• afforded allyl(phenyl)sulfane in excellent yield. Since alkenes are also known to undergo ‘click’ addition with thiols [39][40], excess use of thiols could effectively produce dithioethers, and based on a regioselective addition one could achieve either vicinal or 1,3-dithioethers in one-pot consecutive

Triphenylene discotic liquid crystal trimers synthesized by Co₂(CO)₈-catalyzed terminal alkyne [2 + 2 + 2] cycloaddition

• Bin Han,
• Ping Hu,
• Bi-Qin Wang,
• Carl Redshaw and
• Ke-Qing Zhao

Beilstein J. Org. Chem. 2013, 9, 2852–2861, doi:10.3762/bjoc.9.321

• new organic synthetic methods to prepare novel types of DLC materials and to study the relationship between their molecular structures and the mesomorphic properties [46][47][48][49][50]. We have reported that Cu(I)-catalyzed alkyne–azide click reactions are emerging as an efficient method for the

Advancements in the mechanistic understanding of the copper-catalyzed azide–alkyne cycloaddition

• Regina Berg and
• Bernd F. Straub

Beilstein J. Org. Chem. 2013, 9, 2715–2750, doi:10.3762/bjoc.9.308

• can be further advanced by kinetic studies and the isolation and characterization of key intermediates. Keywords: alkyne; azide; Click; copper; CuAAC; DFT study; Huisgen–Meldal–Sharpless cycloaddition; kinetics; reaction mechanism; Introduction In 1893, Michael discovered a reaction between dimethyl

• conditions. Together with the usually very high yields, the lack of byproducts and uncomplicated work-up procedures, CuAAC reactions with copper(II) salts reduced in situ fulfil all criteria in the concept of “Click” chemistry [62]. However, application of these protocols is naturally limited to substrates

• for CuAAC reactions under Click conditions [144]. These copper(I) complexes can be handled under aerobic conditions and have been fully characterized including single crystal X-ray structures, which show a cubane-like [Cu4Br4] scaffold. Their main advantages are the ease of preparation, tolerance

Synthesis of enantiopure sugar-decorated six-armed triptycene derivatives

• Paola Bonaccorsi,
• Maria Luisa Di Gioia,
• Antonella Leggio,
• Lucio Minuti,
• Teresa Papalia,
• Carlo Siciliano,
• Andrea Temperini and
• Anna Barattucci

Beilstein J. Org. Chem. 2013, 9, 2410–2416, doi:10.3762/bjoc.9.278

• fully characterized. Keywords: azide derivatives; click chemistry; glycoconjugates; 2-propyn-1-yl β-D-glycopyranosides; triptycene; Introduction Triptycene (1), with its three arene units fused to the bicyclo[2.2.2]octa-2,5,7-triene system appears as a paddle wheel on closer inspection (Figure 1). The

• is the first example of six-armed carbohydrate-substituted triptycenes, which appear as promising candidates for the development of new supramolecular systems with specific properties. Results and Discussion The Huisgen 1,3-dipolar cycloaddition reaction, which represents the key step of click

• chemistry, can be easily applied for decorating even complex molecular systems. The reaction can be conducted in various solvents and is compatible with several functional groups. The obtained triazole ring is as stable as the most common amide bonds [15][16][17]. Thus, we decided to use click chemistry for

Efficient continuous-flow synthesis of novel 1,2,3-triazole-substituted β-aminocyclohexanecarboxylic acid derivatives with gram-scale production

• Sándor B. Ötvös,
• Ádám Georgiádes,
• István M. Mándity,
• Lóránd Kiss and
• Ferenc Fülöp

Beilstein J. Org. Chem. 2013, 9, 1508–1516, doi:10.3762/bjoc.9.172

• safe and straightforward way. The obtained 1,2,3-triazole-substituted β-aminocyclohexanecarboxylates can be regarded as interesting precursors for drugs with possible biological effects. Keywords: β-amino acids; click chemistry; continuous-flow; copper; flow chemistry; triazoles; Introduction In

• relatively short reaction time [18][19][20]. Recently, Cu(I)-catalyzed azide–alkyne cycloaddition (CuAAC) has become the basis of the so-called click chemistry concept due to its wide applicability and efficiency. Over the past twenty years, alicyclic β-amino acids have attracted great interest among