Activity assays of NnlA homologs suggest the natural product N-nitroglycine is degraded by diverse bacteria

• Kara A. Strickland,
• Brenda Martinez Rodriguez,
• Ashley A. Holland,
• Shelby Wagner,
• Michelle Luna-Alva,
• David E. Graham and
• Jonathan D. Caranto

Beilstein J. Org. Chem. 2024, 20, 830–840, doi:10.3762/bjoc.20.75

• products. Experimental General reagents and protocols Isopropyl β-ᴅ-1-thiogalactopyranoside (IPTG) and 5-aminolevulinic acid (5-ALA) were purchased from Gold Biotechnology. NNG was purchased from AAblocks. 2-NAE was purchased from Toronto Research Chemicals. General buffers and media components were

• were used to inoculate 100 µL of selective growth media (1/5 LB media, 20 µM isopropyl β-ᴅ-thiogalactopyranoside (IPTG), 300 µM 2-NAE or 3 mM NNG, and antibiotic) in a 96-well plate. After overnight incubation at 37 °C, the cells were pelleted by centrifugation and the nitrite quantified by Griess

Evaluation of the enantioselectivity of new chiral ligands based on imidazolidin-4-one derivatives

• Jan Bartáček,
• Karel Chlumský,
• Jan Mrkvička,
• Lucie Paloušová,
• Miloš Sedlák and
• Pavel Drabina

Beilstein J. Org. Chem. 2024, 20, 684–691, doi:10.3762/bjoc.20.62

• structures for the Henry reaction. The preparation of 5-isopropyl-5-methyl-2-(pyridin-2-yl)imidazolidin-4-one derivatives and their application in asymmetric Henry reaction [5]. Asymmetric Henry reactions of various aldehydes with nitromethane catalysed by copper(II) complexes of ligands Ia–c. Asymmetric

Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin

• Jon Lundstrøm,
• Emilie Gillon,
• Valérie Chazalet,
• Nicole Kerekes,
• Antonio Di Maio,
• Ten Feizi,
• Yan Liu,
• Annabelle Varrot and
• Daniel Bojar

Beilstein J. Org. Chem. 2024, 20, 306–320, doi:10.3762/bjoc.20.31

• overnight. Then, 1 L LB medium supplemented with 25 µg/mL kanamycin was inoculated with 25 mL of the pre-culture and incubated at 37 °C, 180 rpm. When OD600nm reached 0.4, the temperature was lowered to 16 °C, and when OD600nm reached 0.8, protein expression was induced by the addition of 0.1 mM isopropyl β

Synthesis of spiropyridazine-benzosultams by the [4 + 2] annulation reaction of 3-substituted benzoisothiazole 1,1-dioxides with 1,2-diaza-1,3-dienes

• Wenqing Hao,
• Long Wang,
• Jinlei Zhang,
• Dawei Teng and
• Guorui Cao

Beilstein J. Org. Chem. 2024, 20, 280–286, doi:10.3762/bjoc.20.29

• detected and a similar result was observed as for the R3 group (Scheme 2, 3ah,ai vs 3aj,ak,al). To further expand the substrate scope, we next tested other 3-substituted benzoisothiazole 1,1-dioxides 1a–c. As seen from Scheme 2, dienophiles with a bulky and branched isopropyl group (1b) could also be

Identification of the p-coumaric acid biosynthetic gene cluster in Kutzneria albida: insights into the diazotization-dependent deamination pathway

• Seiji Kawai,
• Akito Yamada,
• Yohei Katsuyama and
• Yasuo Ohnishi

Beilstein J. Org. Chem. 2024, 20, 1–11, doi:10.3762/bjoc.20.1

• OD600 reached 0.8. After the culture was cooled on ice for 30 min, isopropyl β-ᴅ-thiogalactopyranoside (IPTG) was added to the culture (for CmaA1 and CmaA3 expression, final concentration was 100 µM; for CmaA6 expression, IPTG was not added) and incubated with shaking (150 rpm) at 15 °C for 20 h. Cells

Aldiminium and 1,2,3-triazolium dithiocarboxylate zwitterions derived from cyclic (alkyl)(amino) and mesoionic carbenes

• Nedra Touj,
• François Mazars,
• Guillermo Zaragoza and
• Lionel Delaude

Beilstein J. Org. Chem. 2023, 19, 1947–1956, doi:10.3762/bjoc.19.145

• desired cycloadduct, although in a modest 30% yield [69]. The subsequent alkylation of N3 with methyl, ethyl, or isopropyl iodide afforded triazolium salts 5a–f in satisfactory to excellent yields. It should be pointed out that compounds 5c–f had never been described before (see the Supporting Information

Biphenylene-containing polycyclic conjugated compounds

• Cagatay Dengiz

Beilstein J. Org. Chem. 2023, 19, 1895–1911, doi:10.3762/bjoc.19.141

• groups representing (a) isopropyl and (b) sec-butyl, were successfully obtained in 84% and 61% yields, respectively. The incorporation of a biphenylene group into the azaacene structure did not result in any significant impact on the electrochemical properties. The electrochemical analysis revealed the

Charge carrier transport in perylene-based and pyrene-based columnar liquid crystals

• Alessandro L. Alves,
• Simone V. Bernardino,
• Carlos H. Stadtlober,
• Edivandro Girotto,
• Giliandro Farias,
• Rodney M. do Nascimento,
• Sergio F. Curcio,
• Thiago Cazati,
• Marta E. R. Dotto,
• Juliana Eccher,
• Leonardo N. Furini,
• Hugo Gallardo,
• Harald Bock and
• Ivan H. Bechtold

Beilstein J. Org. Chem. 2023, 19, 1755–1765, doi:10.3762/bjoc.19.128

• transport [37][38]. Therefore, to better understand the charge mobility of compounds 1 and 2, we obtained their ground state geometry using DFT within the B3LYP/def2-TZVP(-f) level of theory (Figure 8a). To reduce computational efforts, isopropyl moieties were used instead of the large aliphatic

• of the optimized isopropyl derivatives geometry are presented in Supporting Information File 1. Conclusion The electron and hole-transporting characteristics of two columnar liquid crystals were evaluated with electron-only and hole-only devices. Compound 1 is a perylene-based molecule presenting a

Five new sesquiterpenoids from agarwood of Aquilaria sinensis

• Hong Zhou,
• Xu-Yang Li,
• Hong-Bin Fang,
• He-Zhong Jiang and
• Yong-Xian Cheng

Beilstein J. Org. Chem. 2023, 19, 998–1007, doi:10.3762/bjoc.19.75

• mg) was separated by PTLC (petroleum ether/isopropyl alcohol 10:1) to afford eight fractions (Fr.6.7.9.5.14.1–Fr.6.7.9.5.14.8). Fr.6.7.9.5.14.3 (25.4 mg) was further purified by semi-preparative HPLC on YMC-PACK-ODS-A (aqueous MeCN, 65%) to yield 1 (12.7 mg, tR = 28.1 min, flow rate: 3 mL/min). Fr

Strategies in the synthesis of dibenzo[b,f]heteropines

• David I. H. Maier,
• Barend C. B. Bezuidenhoudt and
• Charlene Marais

Beilstein J. Org. Chem. 2023, 19, 700–718, doi:10.3762/bjoc.19.51

• Sargent [18] synthesised pacharin (13) using a novel method through oxidation of a bisphosphonium diphenyl ether prepared in situ from dibromide 130 (Scheme 28). On treatment with base and exposure to oxygen, the diylide intermediate underwent oxidative coupling to give the isopropyl-protected dibenzo[b,f

Nucleophile-induced ring contraction in pyrrolo[2,1-c][1,4]benzothiazines: access to pyrrolo[2,1-b][1,3]benzothiazoles

• Ekaterina A. Lystsova,
• Maksim V. Dmitriev,
• Andrey N. Maslivets and
• Ekaterina E. Khramtsova

Beilstein J. Org. Chem. 2023, 19, 646–657, doi:10.3762/bjoc.19.46

• yields of the corresponding products 3 and the general course of the reaction. However, the structure of the alcohols 2a–c had an effect on the studied reaction. Reactions with isopropyl alcohol 2b required longer reaction times (UPLC–UV–MS monitoring). This phenomenon could be due to the steric factors

• brought in by a bulky isopropyl substituent in alcohol 2b. In addition, in all studied cases we observed that the reaction of APBTTs 1 with alcohols 2 always afforded labile side-products 5 (Scheme 9). Compounds 5 were formed when the nucleophile 2 attacked on the position C3a of the substrates 1. Such a

Transition-metal-catalyzed domino reactions of strained bicyclic alkenes

• Austin Pounder,
• Eric Neufeld,
• Peter Myler and
• William Tam

Beilstein J. Org. Chem. 2023, 19, 487–540, doi:10.3762/bjoc.19.38

• noted decreasing the steric bulk of the amide moiety of the substrate from isopropyl to ethyl to methyl decreased the enantioselectivity of the reaction. Carbon- and nitrogen-bridging bicyclic alkenes were also identified as competent substrates. In this respect, norbornadiene was found to give the

Identification and determination of the absolute configuration of amorph-4-en-10β-ol, a cadinol-type sesquiterpene from the scent glands of the African reed frog Hyperolius cinnamomeoventris

• Angelique Ladwig,
• Markus Kroll and
• Stefan Schulz

Beilstein J. Org. Chem. 2023, 19, 167–175, doi:10.3762/bjoc.19.16

• , in this work, we show that another major constituent of the male specific gland is (10R,1S,6R,7R,10R)-amorph-4-ene-10β-ol [(1R,4R,4aR,8aS)-4-isopropyl-1,6-dimethyl-1,2,3,4,4a,7,8,8a-octahydronaphthalen-1-ol]. This compound was synthesized for the first time and has the opposite configuration to

• an equatorial isopropyl group and axial OH in compound 14. A more detailed description showing the relevant NOESY correlations is given in Supporting Information File 1. Compound 14 proved to be identical to amorph-4-en-10β-ol, which is a rare natural product, known from the wood oil of Cryptomeria

• define the first stereogenic center at the isopropyl group, which becomes C-4 in the final products. Both S- and R-16 were used to obtain the respective products in high ee and high yields (R-17 = 87%, 98% ee, S-17 = 87%, 99% ee) (Scheme 2) [20]. As in the racemic synthesis (Scheme 1), a HWE reaction

Digyalipopeptide A, an antiparasitic cyclic peptide from the Ghanaian Bacillus sp. strain DE2B

• Adwoa P. Nartey,
• Aboagye K. Dofuor,
• Kofi B. A. Owusu,
• Anil S. Camas,
• Hai Deng,
• Marcel Jaspars and
• Kwaku Kyeremeh

Beilstein J. Org. Chem. 2022, 18, 1763–1771, doi:10.3762/bjoc.18.185

• an isopropyl. The COSY correlation H-38 (δH 2.41, 2.38)/H-39 (δH 5.00) which for this spin system is largely extended by the gHSQC-TOCSY correlations C-38 (δC 40.4)/H-39 (δH 5.00), C-39 (δC 71.6)/H-38 (δH 2.41, 2.38), H-40 (δH 1.55), H-41 (δH 1.21), H-42 (δH 1.21), H-43 (δH 1.21), H-44 (δH 1.21), H

• 1.21), H-43 (δH 1.21), H-44 (δH 1.21), H-45 (δH 1.21), H-46 (δH 1.21), and C-48 (δC 39.7)/H-50 (δH 0.86) fully confirms the aliphatic side chain terminating by an isopropyl moiety. Some of the HMBC correlations used to support this substructure are, H-38 (δH 2.41, 2.38)/C-39 (δC 71.6), H-39 (δH 5.00)/C

• examine similar lipopeptide structures previously characterized in the literature that possessed both the fatty acid chain terminating as an isopropyl and adjacent to Glu residue connected by an amide bond. This detailed examination revealed that in the structure of these cyclic lipopeptides, the

An alternative C–P cross-coupling route for the synthesis of novel V-shaped aryldiphosphonic acids

• Stephen J. I. Shearan,
• Enrico Andreoli and
• Marco Taddei

Beilstein J. Org. Chem. 2022, 18, 1518–1523, doi:10.3762/bjoc.18.160

• distillation, to the first column also allows for the collection of unreacted phosphite, and byproducts, such as isopropyl bromide. Firstly, this prevents any release of vapours of toxic compounds and facilitates appropriate disposal procedures. Secondly, it is likely that the majority of what remains in the

A one-pot electrochemical synthesis of 2-aminothiazoles from active methylene ketones and thioureas mediated by NH₄I

• Shang-Feng Yang,
• Pei Li,
• Zi-Lin Fang,
• Sen Liang,
• Hong-Yu Tian,
• Bao-Guo Sun,
• Kun Xu and
• Cheng-Chu Zeng

Beilstein J. Org. Chem. 2022, 18, 1249–1255, doi:10.3762/bjoc.18.130

• ethyl, n-propyl, isopropyl, n-butyl, tert-butyl and cyclohexyl moieties were also compatible with the optimized conditions, providing the corresponding 2-aminothiazoles in 24% to 65% yields (3g–l). As shown in Scheme 2, when the R1 group changed from alkyl to aryl, the target products could also be

A Streptomyces P450 enzyme dimerizes isoflavones from plants

• Run-Zhou Liu,
• Shanchong Chen and
• Lihan Zhang

Beilstein J. Org. Chem. 2022, 18, 1107–1115, doi:10.3762/bjoc.18.113

• 16 °C and induced with 0.1 mM isopropyl β-ᴅ-1-thiogalactopyranoside (IPTG) for 16 h. Cells were harvested by centrifugation (10 min, 8,000 rpm, 4 °C). For protein purification, cell pellets were resuspended in lysis buffer (50 mM NaH2PO4, 400 mM NaCl, 1 mM TCEP, pH 7.5) and lysed by sonication. After

Scope of tetrazolo[1,5-a]quinoxalines in CuAAC reactions for the synthesis of triazoloquinoxalines, imidazoloquinoxalines, and rhenium complexes thereof

• Laura Holzhauer,
• Chloé Liagre,
• Olaf Fuhr,
• Nicole Jung and
• Stefan Bräse

Beilstein J. Org. Chem. 2022, 18, 1088–1099, doi:10.3762/bjoc.18.111

• -donating properties or a positive mesomeric effect combined with a low steric demand, such as methyl and methoxy groups, the triazole product was preferably formed. Increased steric demand of the groups such as for isopropyl residues led to the formation of the imidazole product instead. When using

• conditions. The experiments were thus repeated with the methyl-, isopropyl- and phenyl-substituted compounds 11b, 11c, and 11e; again, increasing the amount of alkyne led to increased formation of the triazole product, especially for 11b and 11c. These observations match with the general mechanism of CuAAC

Electrochemical vicinal oxyazidation of α-arylvinyl acetates

• Yi-Lun Li,
• Zhaojiang Shi,
• Tao Shen and
• Ke-Yin Ye

Beilstein J. Org. Chem. 2022, 18, 1026–1031, doi:10.3762/bjoc.18.103

• substrate scope of this electrochemical oxyazidation reaction was investigated (Scheme 2). Enol acetates derived from various alkyl-substituted phenylacetones were generally well tolerated (3–9, 40–76% yields). The relatively low yield of the isopropyl-substituted one (7) was attributed to the competing

First example of organocatalysis by cathodic N-heterocyclic carbene generation and accumulation using a divided electrochemical flow cell

• Daniele Rocco,
• Ana A. Folgueiras-Amador,
• Richard C. D. Brown and
• Marta Feroci

Beilstein J. Org. Chem. 2022, 18, 979–990, doi:10.3762/bjoc.18.98

• (methyl, isopropyl and benzyl alcohols) were used and the results are shown in Table 3. All the experiments were carried out using a solution of 0.1 M of BMImBF4 in acetonitrile (20 mL) as catholyte, stainless steel as cathode, C/PVDF as anode, in a divided cell, under N2 atmosphere, at room temperature

• with the isopropyl alcohol the formation of the ester was only 37%, probably due to steric hindrance. In two cases (Table 3, entries 1 and 2) oxidation byproducts (esters 4a and 4b) were obtained, where the olefinic double bond is preserved. In contrast to the internal redox reactions of cinnamaldehyde

• (m, 10H), 5.13 (s, 2H), 2.99 (t, J = 7.0 Hz, 2H), 2.70 (t, J = 7.0 Hz, 2H) ppm; 13C NMR (CDCl3) δ 172.7, 140.4, 136.0, 128.6, 128.5, 128.3, 128.2, 126.3, 66.3, 35.9, 31.0 ppm. Isopropyl 3-phenylpropanoate (3c): Spectral data are consistent with those reported in the literature [44]. 1H NMR (CDCl3) δ

Electrochemical and spectroscopic properties of twisted dibenzo[g,p]chrysene derivatives

• Tomoya Imai,
• Ryuhei Akasaka,
• Naruhiro Yoshida,
• Toru Amaya and
• Tetsuo Iwasawa

Beilstein J. Org. Chem. 2022, 18, 963–971, doi:10.3762/bjoc.18.96

• strategy for preparing DBC derivatives using DBC-H with four isopropyl groups at X as a key template for the derivatization (Figure 1c). Based on this strategy, various substituents were introduced at Z to produce DBC-Br, DBC-Me, DBC-SMe, DBC-S(O)2Me, and DBC-Si (Figure 1c) [52]. The structures of all

• voltammogram of DBC-H exhibited a reversible, two-step, two-electron redox process, with Eox1 and Eox2 values of 0.34 V and 0.72 V, respectively (Figure 2a). The value of Eox1 is 0.06 V lower than that of MeO-DBC-1 which does not contain isopropyl groups. This is in contrast to MeO-DBC-3, in which four MeO

• groups are introduced in place of the isopropyl groups, which has a 0.06 V higher oxidation potential than that of MeO-DBC-1. This indicates that alkyl substituents in the X position are effective in stabilizing the radical cation, thus making it more susceptible to oxidation. Unlike DBC-H, an

Synthetic strategies for the preparation of γ-phostams: 1,2-azaphospholidine 2-oxides and 1,2-azaphospholine 2-oxides

• Jiaxi Xu

Beilstein J. Org. Chem. 2022, 18, 889–915, doi:10.3762/bjoc.18.90

• group and the nature of its terminal substituents (aromatic phenyl and aliphatic isopropyl) are the crucial factors impacting the diastereoselectivity. Generally, the substrates with bulky R and aromatic phenyl terminal substituent in their allyl groups gave rise to the desired 1,5-dihydro-1,2

Efficient production of clerodane and ent-kaurane diterpenes through truncated artificial pathways in Escherichia coli

• Fang-Ru Li,
• Xiaoxu Lin,
• Qian Yang,
• Ning-Hua Tan and
• Liao-Bin Dong

Beilstein J. Org. Chem. 2022, 18, 881–888, doi:10.3762/bjoc.18.89

• -kaurene production were created. Next, DL10003–10006 were fermented in Lysogeny broth (LB) medium supplied with 1% glycerol, 6 mM ISO/DMAA 3:1, and 0.1 mM isopropyl β-ᴅ-1-thiogalactopyranoside (IPTG) inducer. In comparison with the negative control of wild-type E. coli BL21 (DE3), all strains successfully

Cathodic generation of reactive (phenylthio)difluoromethyl species and its reactions: mechanistic aspects and synthetic applications

• Sadanobu Iwase,
• Shinsuke Inagi and
• Toshio Fuchigami

Beilstein J. Org. Chem. 2022, 18, 872–880, doi:10.3762/bjoc.18.88

• both radical and anionic intermediates. In order to further clarify the reaction mechanism, the indirect cathodic reduction of compound 1 was performed in the presence of α-methylstyrene in MeCN containing cumene (iPrC6H5) and isopropyl alcohol (iPrOH). The former works as a hydrogen radical source

• -phthalonitrile as mediator in the presence of α-methylstyrene. Reaction of compound 1 with SmI2 in the presence and absence of α-methylstyrene. Indirect cathodic reduction of compound 1 with o-phthalonitrile in the presence of α-methylstyrene in MeCN containing cumene or isopropyl alcohol. Supporting

Synthesis of odorants in flow and their applications in perfumery

• Merlin Kleoff,
• Paul Kiler and
• Philipp Heretsch

Beilstein J. Org. Chem. 2022, 18, 754–768, doi:10.3762/bjoc.18.76

• SAC-13, alkylation of m-cresol with isopropanol proceeds via a Friedel–Crafts-type mechanism in much lower selectivity. In contrast, the authors proposed that employing γ-Al2O3 as Lewis acid catalyst, reaction of 39 and isopropanol leads to isopropyl ether 40. This intermediate undergoes a Fries-type

• = mass flow controller. Synthesis of thymol (41) from m-cresol (39) and isopropyl alcohol via Fries-type rearrangement of ether 40. Preparation of coumarin (46) by reaction of salicylaldehyde (44) with potassium acetate, acetic acid, and acetic anhydride at elevated temperature in two separated tube