Synthesis of 1,4-azaphosphinine nucleosides and evaluation as inhibitors of human cytidine deaminase and APOBEC3A

• Maksim V. Kvach,
• Stefan Harjes,
• Harikrishnan M. Kurup,
• Geoffrey B. Jameson,
• Elena Harjes and
• Vyacheslav V. Filichev

Beilstein J. Org. Chem. 2024, 20, 1088–1098, doi:10.3762/bjoc.20.96

• . Recently, a combination of the CDA inhibitor (4R)-2′-deoxy-2′,2′-difluoro-3,4,5,6-tetrahydrouridine (cedazuridine, Ib, Figure 1B) with the anticancer drug decitabine was approved as an oral pill (i.e., C-DEC or ASTX727) for the treatment of patients with intermediate or high-risk myelodysplastic syndrome

• partially localised in the nucleus of cells and, in cancer cells, become genotoxic [24]. A3A and A3H are single-domain enzymes, whereas A3B is a double-domain enzyme, in which only the C-terminal domain (CTD) has catalytic activity, and the N-terminal domain (NTD) is responsible for binding of DNA and for

• scaffold, compounds Va–c (Figure 1B), in which the N3 atom present in the nucleobase of IV is replaced by CH2. We assumed that this change should not significantly affect the inhibitory potential but rather increase the stability of the target nucleosides in water and allow chemical incorporation into

Light on the sustainable preparation of aryl-cored dibromides

• Fabrizio Roncaglia,
• Alberto Ughetti,
• Nicola Porcelli,
• Biagio Anderlini,
• Andrea Severini and
• Luca Rigamonti

Beilstein J. Org. Chem. 2024, 20, 1076–1087, doi:10.3762/bjoc.20.95

• . Useful alkenyl functional groups can also be obtained by means of elimination processes, if proper alkyl side chains are present. Additional opportunities offered by C(sp3)–Hal bonds arise from the ease of their homolytic cleavage, leading to the formation of reactive carbon-centred radicals. C(sp2)–Hal

• -cored halides can be broadened by converting C–Hal functions into different functional groups. For example, aldehyde and amine functionalities can be readily derived from C(sp3)–Hal functions through hydrolysis–oxidation [13] or substitution [14], respectively. This is of significant interest in the

• context of covalent organic frameworks (COFs) and metal-organic frameworks (MOFs), frequently assembled through imine linkages. While C–H activation through halogens presents clear technical advantages, it also brings forth concerns about the toxicity of halo compounds to both human health and the

Mild and efficient synthesis and base-promoted rearrangement of novel isoxazolo[4,5-b]pyridines

• Vladislav V. Nikol’skiy,
• Mikhail E. Minyaev,
• Maxim A. Bastrakov and
• Alexey M. Starosotnikov

Beilstein J. Org. Chem. 2024, 20, 1069–1075, doi:10.3762/bjoc.20.94

• general synthetic scheme (Scheme 1C), commercially available 2-chloro-3-nitropyridines 1a–c were reacted with ethyl acetoacetate in the presence of NaH to give compounds 2a–c which were not isolated and directly subjected to an in situ nitrosation affording isonitroso compounds 3a–c in good yields

• . Cyclization of the latter under the action of K2CO3 in MeCN at room temperature gave previously unknown ethyl isoxazolo[4,5-b]pyridine-3-carboxylates 4a–c (Scheme 2). To the best of our knowledge only one compound (ethyl 5,7-dimethylisoxazolo[4,5-b]pyridine-3-carboxylate) has been synthesized using a similar

• method, however, the cyclization occurred under drastic conditions (NaH, DMF, 130 °C) as it was reported in patent literature [23]. We assumed that a similar synthetic route (nitrosation/SNAr) would be applicable for the synthesis of isoxazolo[4,5-b]pyridine derivatives bearing other EWG in position 3

Novel route to enhance the thermo-optical performance of bicyclic diene photoswitches for solar thermal batteries

• Akanksha Ashok Sangolkar,
• Rama Krishna Kadiyam and
• Ravinder Pawar

Beilstein J. Org. Chem. 2024, 20, 1053–1068, doi:10.3762/bjoc.20.93

• Perdew–Burke–Ernzerhof (PBE) functional along with the inclusion of the Grimme’s D3 dispersion correction. (a) Previously studied BBD-based photoswitches, (b) recently reported protocol to synthesize a BBD structure with elongated unsaturated bridge [37], (c) BBD-based photoswitches studied in the

• ) energy storage density, (c) TBR barrier. (a) Optimized geometry along with the important geometrical parameters of the TS obtained for the thermal degradation of the photoisomer of the Id system and (b) the IRC profile for the conversion of photoisomer of the type-Id system to undesired by-product

• . Photophysical properties of the studied BBD photoswitches with elongated unsaturated bridges. (a) Optical spectra of dienes of type-I switches and (b) optical spectra of photoproducts of type-I photoswitches, (c) optical spectra of dienes of type-II photoswitches, and (d) optical spectra of photoproducts of

Structure–property relationships in dicyanopyrazinoquinoxalines and their hydrogen-bonding-capable dihydropyrazinoquinoxalinedione derivatives

• Tural N. Akhmedov,
• Ajeet Kumar,
• Daken J. Starkenburg,
• Kyle J. Chesney,
• Khalil A. Abboud,
• Novruz G. Akhmedov,
• Jiangeng Xue and
• Ronald K. Castellano

Beilstein J. Org. Chem. 2024, 20, 1037–1052, doi:10.3762/bjoc.20.92

• of Florida, PO Box 116400, Gainesville, Florida 32611, United States C. Eugene Bennett Department of Chemistry, West Virginia University, 100 Prospect Street, Morgantown, WV 26506, United States Department of Chemistry and Biochemistry, The University of Oklahoma, 101 Stephenson Parkway, Norman, OK

• studies. Conversion of the DCPQs into hydrogen-bonding capable DPQDs results in modulation of frontier MO energies, higher molar extinction coefficients, enhanced crystallinity, and on-average higher thermal stability (where in some cases the 5% weight loss temperature is increased by up to 100 °C

• building blocks 1,2-aceanthrylenedione and 12, as detailed in Table S1 (Supporting Information File 1). However, an inseparable unknown impurity was observed along with the desired product 3a in all cases when analyzed by 1H NMR. Under strict temperature and time control (80 °C for 72 hours) using 2.5

Novel analogues of a nonnucleoside SARS-CoV-2 RdRp inhibitor as potential antivirotics

• Luca Julianna Tóth,
• Kateřina Krejčová,
• Milan Dejmek,
• Eva Žilecká,
• Blanka Klepetářová,
• Lenka Poštová Slavětínská,
• Evžen Bouřa and
• Radim Nencka

Beilstein J. Org. Chem. 2024, 20, 1029–1036, doi:10.3762/bjoc.20.91

• viral replication in cell-based antiviral assays [24]. That study highlighted the beneficial role of the tyrosine residue and the indispensable role of the C-2 substitution. In this work, we report the synthesis and biological evaluation of further analogues of HeE1-2Tyr (1) against the SARS-CoV-2 RdRp

• synthetic strategy leading to pyridones bearing different aryl substituents is described in Scheme 2. During the Suzuki–Miyaura cross-coupling reaction, which introduced the substituents in the C-5 position, the methyl ester protection of the amino acid moiety was also cleaved, leading directly to the final

• compounds 3a (first reported by Cannalire et al. [22]) and 3b,c. Simplification of the hit molecule: synthesis of thiazolopyridone derivatives Further, a novel type of inhibitor containing a thiazolopyridone core and the corresponding azo derivative, namely 4a,b, were synthesized. The synthetic route was

Auxiliary strategy for the general and practical synthesis of diaryliodonium(III) salts with diverse organocarboxylate counterions

• Naoki Miyamoto,
• Daichi Koseki,
• Kohei Sumida,
• Elghareeb E. Elboray,
• Naoko Takenaga,
• Ravi Kumar and
• Toshifumi Dohi

Beilstein J. Org. Chem. 2024, 20, 1020–1028, doi:10.3762/bjoc.20.90

• , Egypt Faculty of Pharmacy, Meijo University, 150 Yagotoyama, Tempaku-ku, Nagoya 468-8503, Japan Department of Chemistry, J. C. Bose University of Science & Technology, YMCA Faridabad, NH-2, Sector-6, Mathura Road, Faridabad, Haryana, 121006, India 10.3762/bjoc.20.90 Abstract Diaryliodonium(III) salts

• productivity in arylation processes [45]. These aryl(TMP)iodonium(III) carboxylates are stable at room temperature and are available as amorphous solids that dissolve in specific solvents, such as chloroform, methanol, and dimethyl sulfoxide. The iodonium salt 7aa does not decompose even at 70 °C, and further

• increase in temperature facilitates the ligand coupling between the phenyl group and the carboxylate counterion. When heated at 140 °C for 2.5 h under solvent-free conditions, iodonium salt 7aa underwent carboxylate O-phenylation with complete phenyl group transfer, resulting in the formation of phenyl

Spin and charge interactions between nanographene host and ferrocene

• Akira Suzuki,
• Yuya Miyake,
• Ryoga Shibata and
• Kazuyuki Takai

Beilstein J. Org. Chem. 2024, 20, 1011–1019, doi:10.3762/bjoc.20.89

• -magnetic guest molecule to activated carbon fibers (ACFs) as a nanographene-based host having localized spins originating from zigzag edges of graphene. The introduction of the guest molecule was confirmed by FTIR for ACFs-FeCp2 introduced at 55 (150) °C (FeCp2-ACFs-55(150)). The appearance of satellite

• photoelectron spectroscopy (XPS), Raman spectroscopy, Fourier-transform infrared (FTIR) spectroscopy, magnetic susceptibility, and electron-spin resonance (ESR). Experimental Commercially available ACFs (Kuraray, FR-20), of which the precursor was a phenol-resin, were pre-heat-treated in a glass tube at 200 °C

• temperatures 55 °C and 150 °C (FeCp2-ACFs-55, FeCp2-ACFs-150), for 18 to 24 hours. The vapor pressure of ferrocene corresponding to each temperature was previously reported (15 Pa for 55 °C, 5.7 × 103 Pa for 150 °C) [27]. In the case of introduction at 150 °C, excessive FeCp2 precipitated as crystals on the

A Diels–Alder probe for discovery of natural products containing furan moieties

• Alyssa S. Eggly,
• Namuunzul Otgontseren,
• Carson B. Roberts,
• Amir Y. Alwali,
• Haylie E. Hennigan and
• Elizabeth I. Parkinson

Beilstein J. Org. Chem. 2024, 20, 1001–1010, doi:10.3762/bjoc.20.88

• used, the reaction proceeded well with 78% conversion when monitored by both MS and NMR spectroscopy. However, when sodium chloride was used instead of sodium hydroxide, no conversion was observed. Temperature was also taken into consideration; temperatures above 55 °C were not considered because we

• utilizing the probe in additional strains to probe for novel natural products similar to the MMFs. A) Bioactive natural products containing a furan ring (blue) or 3-furoic acid moiety (red): plakorsin D, wortmannin, tournefolin C, rosefuran, and flufuran and their respective biological activities. B) MMF

• present. C. Representative UV trace of the reaction products; probe 6, MMF5 (5), and MMF5 cycloadduct 24. All reactions were performed a minimum of three times with similar results being observed in all three replicates. A. The UV trace (254 nm) for M145 control, M145 + probe 6, W75 control, and W75

Carbonylative synthesis and functionalization of indoles

• Alex De Salvo,
• Raffaella Mancuso and
• Xiao-Feng Wu

Beilstein J. Org. Chem. 2024, 20, 973–1000, doi:10.3762/bjoc.20.87

• Alex De Salvo Raffaella Mancuso Xiao-Feng Wu Laboratory of Industrial and Synthetic Organic Chemistry (LISOC), Department of Chemistry and Chemical Technologies, University of Calabria, Via Pietro Bucci 12/C, 87036 Arcavacata di Rende (CS), Italy Leibniz-Institut für Katalyse e.V., Albert-Einstein

• what we are discussing in this mini-review. Review Carbonylative synthesis of indoles Synthesis of indoles by Pd(0)-catalyzed carbonylation reaction of halide compounds Processes using organic halides as their starting materials involving the oxidative addition of Pd(0) to C–X bonds to give Ar–PdII–X

• complexes are important for the synthesis of heterocyclic and non-heterocyclic compounds. In 2009, Arthuis and co-workers developed a new process for the synthesis of 2-aroylindoles and 2-heteroaroylindoles by a one-pot palladium-catalyzed domino reaction that involves an initial C,N-coupling followed by

Enhancing structural diversity of terpenoids by multisubstrate terpene synthases

• Min Li and
• Hui Tao

Beilstein J. Org. Chem. 2024, 20, 959–972, doi:10.3762/bjoc.20.86

• generate diverse terpene skeletons via sophisticated cyclization cascades. In addition to the many highly selective TSs, there are many promiscuous TSs that accept multiple prenyl substrates, or even noncanonical ones, with 6, 7, 8, 11, and 16 carbon atoms, synthesized via chemical approaches, C

• depyrophosphorylation, whereas class II TSs utilize a general acid (a key Asp residue) to protonate the terminal C=C bond or epoxide group to yield a tertiary carbocation. The highly reactive carbocation is then converted to different carbocation intermediates, facilitated by the hydrophobic pocket of the TSs, which

• TSs and three PTs to generate 4, 5 or geranylfarnesyl diphosphate (GFPP, 29, Figure 1), representative products 30–33 are shown in Figure 3a [28]. Notably, FgMS is a chimeric enzyme (PTTS) consisting of an N-terminal class I TS domain and a C-terminal GFPP synthase domain. Therefore, to block the

Enantioselective synthesis of β-aryl-γ-lactam derivatives via Heck–Matsuda desymmetrization of N-protected 2,5-dihydro-1H-pyrroles

• Arnaldo G. de Oliveira Jr.,
• Martí F. Wang,
• Rafaela C. Carmona,
• Danilo M. Lustosa,
• Sergei A. Gorbatov and
• Carlos R. D. Correia

Beilstein J. Org. Chem. 2024, 20, 940–949, doi:10.3762/bjoc.20.84

• Arnaldo G. de Oliveira Jr. Marti F. Wang Rafaela C. Carmona Danilo M. Lustosa Sergei A. Gorbatov Carlos R. D. Correia Department of Organic Chemistry, Chemistry Institute, University of Campinas, Rua Josué de Castro, 13083-970 Campinas, São Paulo, Brazil 10.3762/bjoc.20.84 Abstract We report

• the palladium source in combination with the pyrazinebisoxazoline ligand, (S)-PyraBox (L1), zinc carbonate as base, and methanol as solvent at 40 °C. These initial conditions furnished 2-methoxypyrrolidines arylated at the 4-position, compound 3, as Heck products as illustrated in Scheme 3. The

• temperature gave the NH-unprotected γ-lactam 5a and the drug (R)-rolipram 5b in 79% and 97% yields, respectively, with excellent enantioselectivity. Hydrolysis of γ-lactam 5a in 6 N HCl aqueous solution at 100 °C for 10 hours then led to the formation of (R)-baclofen hydrochloride (6) in 76% yield (Scheme 6

Monitoring carbohydrate 3D structure quality with the Privateer database

• Jordan S. Dialpuri,
• Haroldas Bagdonas,
• Lucy C. Schofield,
• Phuong Thao Pham,
• Lou Holland and
• Jon Agirre

Beilstein J. Org. Chem. 2024, 20, 931–939, doi:10.3762/bjoc.20.83

• Jordan S. Dialpuri Haroldas Bagdonas Lucy C. Schofield Phuong Thao Pham Lou Holland Jon Agirre York Structural Biology Laboratory, Department of Chemistry, University of York, UK 10.3762/bjoc.20.83 Abstract The remediation of the carbohydrate data of the Protein Data Bank (PDB) has brought

• validation report is the beginning of the carbohydrate information, listed as ‘glycans’ in the JSON format. Within this ‘glycan’ scope, information is segmented into glycan types, that is, ‘n-glycan’, ‘o-glycan’, ‘s-glycan’, ‘c-glycan’, and 'ligand'. Each of these glycan types contains an array of individual

• calculated by Privateer and, most importantly, the diagnostic provided by Privateer (Figure 4). A ‘yes’ diagnostic indicates the conformation is correct for the glycosylation type (e.g., 4C1 for GlcNAc in an N-glycan, 1C4 for mannose in a C-glycan), has the correct anomer, and has an acceptable fit to

Direct synthesis of acyl fluorides from carboxylic acids using benzothiazolium reagents

• Lilian M. Maas,
• Alex Haswell,
• Rory Hughes and
• Matthew N. Hopkinson

Beilstein J. Org. Chem. 2024, 20, 921–930, doi:10.3762/bjoc.20.82

• employed as acylation reagents [1][2][3]. The strong C–F bond makes acyl fluorides relatively stable towards hydrolysis and easier to handle than other acyl halides [4][5][6][7][8]. Their reactions with nucleophiles are typically less violent than for the corresponding acyl chlorides with acyl fluorides

• - or meta-positions all reacted smoothly with 4a to afford the corresponding benzylamides 5a–c in very good isolated yields up to 81%. Electron-donating and -withdrawing groups at the para-position were well tolerated (5d–f), including halogen substituents that could serve as handles for follow-up

• from a self-propagating process initiated by addition of an adventitious nucleophile to the electrophilic thioester. This results in elimination of a (trifluoromethyl)thiolate (−SCF3) anion (C, Scheme 4), which can subsequently undergo β-fluoride elimination, releasing a fluoride anion. Addition of F

One-pot Ugi-azide and Heck reactions for the synthesis of heterocyclic systems containing tetrazole and 1,2,3,4-tetrahydroisoquinoline

• Jiawei Niu,
• Yuhui Wang,
• Shenghu Yan,
• Yue Zhang,
• Xiaoming Ma,
• Qiang Zhang and
• Wei Zhang

Beilstein J. Org. Chem. 2024, 20, 912–920, doi:10.3762/bjoc.20.81

• the reported procedures [41], the Ugi-azide reaction of 2-bromobenzaldehyde (1a, 1 mmol), allylamine hydrochloride (2, 1 mmol), trimethylsilyl azide (3, 1 mmol) and tert-butyl isocyanide (4a, 1 mmol) in MeOH at 40 °C for 24 h afforded 1,5-DS-1H-T 5a in 92% yield after chromatography purification. Our

• first examined by using 10 mol % Pd(OAc)2, 20 mol % PPh3, 2 equiv of Et3N in CH3CN or DMF at 105 °C for 24 h under N2 atmosphere. However, the reactions failed under these conditions (Table 1, entries 1 and 2). When K2CO3 was used as a base to replace Et3N, the reactions in either CH3CN or DMF for 3 h

• to use 1 mmol of 5a with 10 mol % Pd(OAc)2 and 20 mol % PPh3, 2 equiv of K2CO3 in 3 mL CH3CN at 105 °C for 3 h under N2 atmosphere which afforded product 6a in 70% yield (Table 1, entry 3). The combination of an initial multicomponent reaction with post-condensation reactions in one-pot is a good

Synthesis and properties of 6-alkynyl-5-aryluracils

• Ruben Manuel Figueira de Abreu,
• Till Brockmann,
• Alexander Villinger,
• Peter Ehlers and
• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 898–911, doi:10.3762/bjoc.20.80

• obtained. Compounds 3a–j were subsequently transformed to 5a–t by Suzuki–Miyaura cross-coupling. The bromination of 1 was performed by using Br2 (1 equiv), Ac2O (1.5 equiv), AcOH (25 °C, 1 h) and yielded the desired product in 52% [62]. With the starting material in hand, initial Sonogashira–Hagihara cross

• using Pd(PPh3)Cl2 (5 mol %), CuI (5 mol %), NEt3 (10 equiv), DMSO, at 25 °C for 6 h as reaction conditions with excellent yield and selectivity. With the optimized conditions in hand, the next step was to investigate the scope and afford 3a–j. The corresponding results are depicted in Scheme 2. The

• effect can be observed for 3e, 3f and 3i. Furthermore, the separation of these products has proven to be more challenging than other compounds with higher yields. In the reaction with 3-pyridylacetylene no product 3g could be obtained. The reaction at 50 °C was found to be chemoselective, giving only the

Three-component N-alkenylation of azoles with alkynes and iodine(III) electrophile: synthesis of multisubstituted N-vinylazoles

• Jun Kikuchi,
• Roi Nakajima and
• Naohiko Yoshikai

Beilstein J. Org. Chem. 2024, 20, 891–897, doi:10.3762/bjoc.20.79

• motif in bioactive compounds and the synthetic utility of its olefinic C=C bond. The most extensively explored approach to this transformation is the transition metal-catalyzed C–N coupling between azoles and vinylating agents, including vinyl halides [4], boronates [5], sulfonium salts [6][7][8], and

• performed in 68% and 74% yields, respectively (Scheme 4a). Furthermore, the iodanyl group on these products serves as a versatile handle for downstream transformations, thus allowing for the stereoselective preparation of various trisubstituted N-vinylazoles (Scheme 4b). Pd-catalyzed C–C couplings such as

• Suzuki–Miyaura and Sonogashira couplings on 4aa or 4ba afforded the desired products 5 and 6 in 47% and 74% yields, respectively. In the former case, the C–Br bond on the pyrazole moiety remained intact, highlighting the superior leaving group ability of the BX group. Cu-catalyzed Ullmann coupling

(Bio)isosteres of ortho- and meta-substituted benzenes

• H. Erik Diepers and
• Johannes C. L. Walker

Beilstein J. Org. Chem. 2024, 20, 859–890, doi:10.3762/bjoc.20.78

• H. Erik Diepers Johannes C. L. Walker Institut für Organische und Biomolekulare Chemie, Georg-August-Universität Göttingen, Tammannstraße 2, 37077 Göttingen, Germany 10.3762/bjoc.20.78 Abstract Saturated bioisosteres of substituted benzenes offer opportunities to fine-tune the properties of drug

• -workers reported a method for the selective bridge bromination of BCPs, giving access to brominated 1,2-BCP (±)-16 (Scheme 2) [33]. By exploiting the homolytic cleavage of the C–Br bond using in situ-generated silyl radicals, they were then able to harness the installed bromide functionality in

• substituted ortho-benzene. Stephenson and co-workers accessed 1,2-BCHeps 79a–c by insertion of alkenes into BCPs 78, and proposed the 1,2-BCHeps as isosteres of ortho-benzenes (Scheme 7A) [46]. The reaction proceeded via homolytic cleavage of a C–C bond adjacent to the imine functionality and stepwise alkene

Confirmation of the stereochemistry of spiroviolene

• Yao Kong,
• Yuanning Liu,
• Kaibiao Wang,
• Tao Wang,
• Chen Wang,
• Ben Ai,
• Hongli Jia,
• Guohui Pan,
• Min Yin and
• Zhengren Xu

Beilstein J. Org. Chem. 2024, 20, 852–858, doi:10.3762/bjoc.20.77

• be produced by feeding prenol and/or isoprenol to the fermentation broth after E. coli being induced by IPTG, and fermented at 18 °C for 72 h. In our hand, feeding a mixture of prenol and isoprenol in a 1:1 ratio would give the best yield of spiroviolene. GC–MS analysis (Figure 2A) of the EtOAc

• BH3·THF in THF, and heated at 60 °C for 3 days. After oxidative treatment of the resultant alkylborane products with NaOH/H2O2, we have obtained three derivatives 9–11 with one hydroxy group in 37%, 30% and 21% isolated yield, respectively, as well as recovery of 10% of the starting material. After

• , respectively. The formation of all three products 9–11 can be explained as follows (Scheme 2A) [28][29][30][31]: Due to the favorable formation of cis-5,5-fused B/C ring system, the borane reagent is preferred to approach the double bond of 1 from the α-face, to give either a secondary 1-organoborane

Ortho-ester-substituted diaryliodonium salts enabled regioselective arylocyclization of naphthols toward 3,4-benzocoumarins

• Ke Jiang,
• Cheng Pan,
• Limin Wang,
• Hao-Yang Wang and
• Jianwei Han

Beilstein J. Org. Chem. 2024, 20, 841–851, doi:10.3762/bjoc.20.76

• , herein, we utilized a copper catalyst to activate the C–I bond of diaryliodonium salts in the generation of aryl radicals, thus resulting in an annulation reaction with naphthols and substituted phenols. This approach yielded a diverse array of 3,4-benzocoumarin derivatives bearing various substituents

• have been employed in benzocyclization and arylocyclization reactions, enabling intramolecular cyclization by forming aromatic or heterocyclic rings as a part of cyclic structures [8]. In these reactions, the dual activation of a C–I bond and vicinal C–H bonds/functional groups features a distinct

• advantage, facilitating the formation of two or more chemical bonds in a step-economic manner [9][10][11][12][13]. In a prior study, we reported a palladium-catalyzed efficient activation of both C–I bond and the adjacent C–H bond of diaryliodonium salts in the formation of 4,5-benzocoumarin derivatives

Activity assays of NnlA homologs suggest the natural product N-nitroglycine is degraded by diverse bacteria

• Kara A. Strickland,
• Brenda Martinez Rodriguez,
• Ashley A. Holland,
• Shelby Wagner,
• Michelle Luna-Alva,
• David E. Graham and
• Jonathan D. Caranto

Beilstein J. Org. Chem. 2024, 20, 830–840, doi:10.3762/bjoc.20.75

• further characterization. The H73A Vs NnlA variant, previously shown to lack NNG degradation activity, was used as a negative control [21]. E. coli transformants containing the expression vectors were incubated at 37 °C overnight in diluted lysogeny broth (LB) containing NNG and IPTG, the latter component

• deoxygenated 30 mM tricine buffer at pH 7.5 were incubated for one hour at 21 °C in an anaerobic glove box. The samples were analyzed by LC–MS to measure final glyoxylate and NNG concentrations. The extracted ion chromatograms (EICs) showed that NNG was completely consumed and glyoxylate accumulated within the

• 37 °C in diluted LB containing 300 µM 2-NAE. Post-incubation treatment of the samples with Griess assay revealed that all the cultures lacked NO2− (Figure S3, Supporting Information File 1). Combined, these results show that none of the NnlA homologs can degrade 2-NAE. To ensure the lack of 2-NAE

Skeletal rearrangement of 6,8-dioxabicyclo[3.2.1]octan-4-ols promoted by thionyl chloride or Appel conditions

• Martyn Jevric,
• Julian Klepp,
• Johannes Puschnig,
• Oscar Lamb,
• Christopher J. Sumby and
• Ben W. Greatrex

Beilstein J. Org. Chem. 2024, 20, 823–829, doi:10.3762/bjoc.20.74

• reports of Karban et al. (Scheme 2) [19]. We envisaged that these hexose-derived building blocks with a 2,5-anhydro bond such as 5 could be useful materials for the construction of C-nucleosides such as formycin A (Figure 1) [22][23][24]. The preparation of C-glycosides usually involves the creation of

• the exo-face. This process was used to prepare the known compounds 10a–c, and the novel materials 10d–f [9]. Thus, the reaction of o-dibromoxylene with cyrene gave the alcohol 10d in 71% yield over two-steps through the spirocyclic ketone 9d. Alkylation of 2 with methyl iodide gave an inseparable

• during chromatography, and so an alternate method was developed to generate a single product by promoting the formation of the hemiacetal series 12a–f. Following the rearrangement reaction, chromatography of the chlorides using silica with 2% water added led to the isolation of 12a,c–f in good yield

Discovery and biosynthesis of bacterial drimane-type sesquiterpenoids from Streptomyces clavuligerus

• Dongxu Zhang,
• Wenyu Du,
• Xingming Pan,
• Xiaoxu Lin,
• Fang-Ru Li,
• Qingling Wang,
• Qian Yang,
• Hui-Min Xu and
• Liao-Bin Dong

Beilstein J. Org. Chem. 2024, 20, 815–822, doi:10.3762/bjoc.20.73

• genome mining and heterologous expression, we identified a cav biosynthetic gene cluster responsible for the biosynthesis of DMTs 2–4, along with a P450, CavA, responsible for introducing the C-2 and C-3 hydroxy groups. Furthermore, the substrate scope of CavA revealed its ability to hydroxylate drimenol

• diphosphate (DMAPP) from the mevalonate (MVA) and 2-C-methyl-ᴅ-erythritol 4-phosphate (MEP) pathways [2][3]. Sesquiterpenoids, synthesized from farnesyl diphosphate (FPP) which is composed of three C5 units, hold significant biological and industrial value, particularly in the realm of perfumery [4]. Among

• emphasize the potential of DMTs as substances with broad and significant biological activities. The biosynthetic pathways for DMTs, especially for calidoustene C, (+)-isoantrocin, and (−)-antrocin, have been extensively elucidated [6][13][14][15][16][17][18][19][20] (Figure 1b). In the biosynthesis of

Advancements in hydrochlorination of alkenes

• Daniel S. Müller

Beilstein J. Org. Chem. 2024, 20, 787–814, doi:10.3762/bjoc.20.72

• reaction, the protonation of the alkene is the rate-determining step. This process can be viewed as the reaction between a nucleophile (alkene) and an electrophile (proton). According to the Mayr–Patz equation log(k) = s(N + E), the second order reaction rate constant k at 20 °C for a reaction is related

• C–H bonds into the alkene π-bond [30]. Before reviewing polar hydrochlorination reactions in detail, it is worth mentioning several statements which were made in the Sergeev review [12]: a) The activation energy for an anti-Markovnikov addition is at least by 30 kJ mol−1 higher than for normal

• only 10–25% of the primary chloride for the reaction of tert-butylethylene with HCl in the presence of benzoyl peroxide [33]. c) Several metal halides such as AlCl3, SnCl4, FeCl3, and CuCl exhibit catalytic activities for the hydrochlorination of alkenes. The enthalpy of formation for the hydrogen

Synthesis and characterization of water-soluble C₆₀–peptide conjugates

• Yue Ma,
• Lorenzo Persi and
• Yoko Yamakoshi

Beilstein J. Org. Chem. 2024, 20, 777–786, doi:10.3762/bjoc.20.71

• (GABA) at the N-terminus of the Lys pentamer peptide on resin. Using the optimal reaction conditions, three types of hydrophilic peptide pentamers on resin, oligo-Lys (2a), oligo-Glu (2b), and oligo-Arg (2c), were subjected to the reaction with 3 for the synthesis of C60–peptide conjugates 5a–c (Figure

•  1). Results and Discussion Syntheses of C60–oligopeptides 5a–c The oligopeptides 2a–c were synthesized on resin using Fmoc-protected amino acids with a standard SPPS method (Figure 1a) [43]. A moderate loading (0.4 mmol⋅g−1) of the initial amino acid was used. After synthesizing the pentamer of Lys

• acid-substituted C60 derivative 3 and the peptides on resin 2a–c were performed by SPPS to provide the C60–oligopeptides on resin 4a–c (Figure 1a). Subsequently, the last step of the reaction – the cleavage of the C60–peptide conjugate from the resin and the simultaneous deprotection of the amino acid