CF₃-substituted carbocations: underexploited intermediates with great potential in modern synthetic chemistry

• Anthony J. Fernandes,
• Armen Panossian,
• Bastien Michelet,
• Agnès Martin-Mingot,
• Frédéric R. Leroux and
• Sébastien Thibaudeau

Beilstein J. Org. Chem. 2021, 17, 343–378, doi:10.3762/bjoc.17.32

• , and triflate 45f, which was isolated after basic workup of the reaction (59% yield) [63]. Hence, protonation of 44 led to dialkoxysulfonium triflate 47 along with the release of alcohol 9g. The subsequent formation of the excellent sultine leaving group 46 (assumed to be as good of a leaving group as

• 104–107 range [39][40][41][43][48][68]. Thus, while introducing one CF3 group dramatically alters the reactivity, an additional CF3 group does not seem to significantly impact the reactivity any further. The hypothesis of a ground-state strain release to explain this behavior was discarded as an

• proposed that upon heating, Ga(OTf)3 reacts with 63 to release an indolium ion 65 and forms an organogallium species 67 via intermediate 66, which, after protodemetallation, releases indole 62 and regenerates the catalyst. The retro-Friedel–Crafts reaction at 80 °C at the indole C3-position thus allows the

Regioselective chemoenzymatic syntheses of ferulate conjugates as chromogenic substrates for feruloyl esterases

• Olga Gherbovet,
• Fernando Ferreira,
• Apolline Clément,
• Mélanie Ragon,
• Julien Durand,
• Sophie Bozonnet,
• Michael J. O'Donohue and
• Régis Fauré

Beilstein J. Org. Chem. 2021, 17, 325–333, doi:10.3762/bjoc.17.30

• from Aspergillus niger (AnFaeA, Figure 1C). Coloration is the result of successive reactions: (i) release of the free 5-bromo-4-chloro-indoxyl-3-ol by an enzyme cascade, wherein TxAbf-catalyzed cleavage of the glycosidic bond was made possible by the prior release by AnFaeA of the ferulate moiety [21

• of Faes was investigated (Figure 2), measuring 4NTC release by AnFaeA [42] at 40 °C. The enzyme-catalyzed reaction leads to the cleavage of the ester bond linking the ferulate to the linker–4NTC moiety, and thus to the accumulation of linker–4NTC. Therefore, working in a discontinuous mode, 4NTC is

¹⁹F NMR as a tool in chemical biology

• Diana Gimenez,
• Aoife Phelan,
• Cormac D. Murphy and
• Steven L. Cobb

Beilstein J. Org. Chem. 2021, 17, 293–318, doi:10.3762/bjoc.17.28

• , Otting and co-workers have recently developed a synthetic strategy, based on a continuous exchange cell-free system (CECF), in which a key chitin-binding mutant of release factor RF1 can be removed under conditions that maintain the full activity of the S30 extract, thereby minimizing the incidence of

• biosynthesis through hBBOX-catalysed GBBNF hydroxylation, both in vitro and in cell lysates [43]. Moreover, by using a competitive substrate for the enzyme, inhibition experiments could be directly employed to determine the IC50 values in the basis of fluoride release, and the extent of GBBNF turnover

• cell lines [44]. Here, the incorporation of CF3 and CF3O groups as NMR reporters into the tumour-targeting drug conjugates enabled the direct investigation of the mechanism of the pro-drug metabolic cleavage and the pharmacophore release by real-time 19F NMR analysis. 19F NMR was also employed as a

The preparation and properties of 1,1-difluorocyclopropane derivatives

• Kymbat S. Adekenova,
• Peter B. Wyatt and
• Sergazy M. Adekenov

Beilstein J. Org. Chem. 2021, 17, 245–272, doi:10.3762/bjoc.17.25

• Ph3P+CF2−, which was used for the Wittig olefination of aldehydes and ketones. However, heating PDFA in nonpolar solvents (e.g., xylene at 90 °C) favors the dissociation of the ylide to release difluorocarbene which is able to effect the cyclopropanation of alkenes [34]. Trimethylsilyl

• . Further applications of free radical chemistry have developed through the use of radical initiators under comparatively mild conditions to form cyclopropylmethyl radicals, which can readily release their strain by opening to give homoallyl radicals. gem-Difluorocyclopropanes, because of their

Au(III) complexes with tetradentate-cyclam-based ligands

• Ann Christin Reiersølmoen,
• Thomas N. Solvi and
• Anne Fiksdahl

Beilstein J. Org. Chem. 2021, 17, 186–192, doi:10.3762/bjoc.17.18

• immediate color change into dark red/brown took place after addition of complex 6b-Au(III), indicating a low stabilization of the coordinated diphenyl ligand and a fast release of Au. The de-coordination resulted in full conversion within 15 min in both reactions (Table 1, entries 3 and 6), compared to 24

Multiswitchable photoacid–hydroxyflavylium–polyelectrolyte nano-assemblies

• Alexander Zika and
• Franziska Gröhn

Beilstein J. Org. Chem. 2021, 17, 166–185, doi:10.3762/bjoc.17.17

• small counterion release may contribute (likely, it is ionic repulsion due to the excess of positive charges (l < 1.0) in combination with changes in hydration shells that make this region endotherm). The last binding step starts at l = 0.16 (molar ratio 0.075), equal to 17 monomer units per poly

Recent progress in the synthesis of homotropane alkaloids adaline, euphococcinine and N-methyleuphococcinine

• Dimas J. P. Lima,
• Antonio E. G. Santana,
• Michael A. Birkett and
• Ricardo S. Porto

Beilstein J. Org. Chem. 2021, 17, 28–41, doi:10.3762/bjoc.17.4

• all synthetic works published in the last 25 years. Review Chemical ecology of Adalia bipunctata Individuals of Adalia bipunctata species (2-spot ladybird) display aposematic coloration reinforced by the production and release of remarkable amounts of reflex-fluid, in response to predator attack [29

Molecular basis for protein–protein interactions

• Brandon Charles Seychell and
• Tobias Beck

Beilstein J. Org. Chem. 2021, 17, 1–10, doi:10.3762/bjoc.17.1

• in the protein molecules due to proton uptake and release. Therefore, these events are strongly affected by the pH value and the ionic strength. Variation of the pH value or the ionic strength can result in substantial binding free energy changes [48] or changes in the binding preference [49

Chemical constituents of Chaenomeles sinensis twigs and their biological activity

• Joon Min Cha,
• Dong Hyun Kim,
• Lalita Subedi,
• Zahra Khan,
• Sang Un Choi,
• Sun Yeou Kim and
• Chung Sub Kim

Beilstein J. Org. Chem. 2020, 16, 3078–3085, doi:10.3762/bjoc.16.257

• compounds, only compound 8 (apigenin) exhibited a weak activity on the NGF release with a stimulation level of 127.8 ± 2.0% without displaying cell toxicity (100.9 ± 0.6%). Conclusion A new megastigmane-type norsesquiterpenoid glycoside 1 was isolated along with 11 known compounds from the MeOH extract of C

• , Seoul, Republic of Korea) were used to assess the release of NGF into the culture medium. The test cells were seeded onto 24-well plates at a density of 1 × 105 cells/well. After 24 h, the cells were treated with serum-free DMEM and incubated with the designated concentrations of the compounds for an

Deoxyfluorination of acyl fluorides to trifluoromethyl compounds by FLUOLEAD^®/Olah’s reagent under solvent-free conditions

• Yumeng Liang,
• Akihito Taya,
• Zhengyu Zhao,
• Norimichi Saito and
• Norio Shibata

Beilstein J. Org. Chem. 2020, 16, 3052–3058, doi:10.3762/bjoc.16.254

• an intermediate III via transition state II. The intermediate III is further activated by (HF)n to form IV, which finally induces the deoxyfluorination via V furnishing the trifluoromethylated products 2 with the release of ArS(O)F and (HF)n. Conclusion We have reported an efficient protocol for the

Metal-free nucleophilic trifluoromethylselenolation via an iodide-mediated umpolung reactivity of trifluoromethylselenotoluenesulfonate

• Kevin Grollier,
• Alexis Taponard,
• Arnaud De Zordo-Banliat,
• Emmanuel Magnier and
• Thierry Billard

Beilstein J. Org. Chem. 2020, 16, 3032–3037, doi:10.3762/bjoc.16.252

• substitute the leaving group onto the electrophilic substrate 2. However, because of the release of I2, as side reaction the oxidation of the CF3Se− anion can be also envisaged. This was confirmed by the formation of 25–30% of CF3SeSeCF3 when 1 equivalent of 2a was used (Table 1, entries 3 and 4

Metal-free synthesis of biarenes via photoextrusion in di(tri)aryl phosphates

• Hisham Qrareya,
• Lorenzo Meazza,
• Stefano Protti and
• Maurizio Fagnoni

Beilstein J. Org. Chem. 2020, 16, 3008–3014, doi:10.3762/bjoc.16.250

• , biphenyl (1b) is formed as the byproduct in <5% yield. Conclusion We demonstrated that biaryls can be smoothly prepared via the photoextrusion of diaryl- and triaryl phosphates in protic media, with the concomitant release of a molecule of phosphoric acid monoester. The reaction takes place in moderate

Secondary metabolites of Bacillus subtilis impact the assembly of soil-derived semisynthetic bacterial communities

• Heiko T. Kiesewalter,
• Carlos N. Lozano-Andrade,
• Mikael L. Strube and
• Ákos T. Kovács

Beilstein J. Org. Chem. 2020, 16, 2983–2998, doi:10.3762/bjoc.16.248

• reads were assigned to the respective samples with an average of 12,083 reads per sample (range: 751 to 34,802; Table S3, Supporting Information File 1). The 16S rRNA reference sequences with a 99% identity criterion obtained from the SILVA database release 132 were trimmed to the V3-V4 region, bound by

Selected peptide-based fluorescent probes for biological applications

• Debabrata Maity

Beilstein J. Org. Chem. 2020, 16, 2971–2982, doi:10.3762/bjoc.16.247

• which have affinity for the CB[8] cavity. These substrates easily displace 6 from the CB[8] cavity and release 6 which folds again to form a pyrene excimer, which allows for the ratiometric fluorescence monitoring of those substrates. Upon screening methyl ester derivatives of hydrophobic amino acids

Incorporation of a metal-mediated base pair into an ATP aptamer – using silver(I) ions to modulate aptamer function

• Marius H. Heddinga and
• Jens Müller

Beilstein J. Org. Chem. 2020, 16, 2870–2879, doi:10.3762/bjoc.16.236

• to release a DNA-bound cargo (in the form of small organic molecules) [10]. Similarly, metal ions can trigger DNA folding into a catalytically active topology [11][12]. Metal-mediated base pairs are artificial base pairs in which hydrogen bonds between the complementary nucleobases are formally

Using multiple self-sorting for switching functions in discrete multicomponent systems

• Amit Ghosh and
• Michael Schmittel

Beilstein J. Org. Chem. 2020, 16, 2831–2853, doi:10.3762/bjoc.16.233

• supramolecule-to-supramolecule transformations, involving functions such as chemical purification, controllable guest uptake and release, and reagent storage along with catalysis [47]. However, neither of the examples in this compilation proved to be reversible. In the present minireview, we highlight the

• release of DABCO using a double self-sorting protocol [54]. Schmittel and co-workers reported on the three-component rectangle [Cu4(16)2(17)2]4+ (SelfSORT-I) that rearranged into the four-component sandwich complex [Cu2(16)(17)(18)]2+ (Figure 8) upon the addition of DABCO (SelfSORT-II). A full

• innovative catch–release system with multiple functions combined the ON/OFF-adjustment of silver(I) catalysis and fluorescence monitoring [59]. Actually, the ratiometric luminescence response allowed the exact monitoring of the catalytic activity. In the initial incomplete self-sorting (state SelfSORT-I

Easy access to a carbohydrate-based template for stimuli-responsive surfactants

• Thomas Holmstrøm,
• Daniel Raydan and
• Christian Marcus Pedersen

Beilstein J. Org. Chem. 2020, 16, 2788–2794, doi:10.3762/bjoc.16.229

• -delivery system owing to their size and the ability to carry drugs, both in the polar (core) or apolar (lipid bilayer) interior [4][5]. A challenge in liposome-based drug delivery systems is to release the drug at the place of function. This challenge has led to the development of stimuli-responsive

Optical detection of di- and triphosphate anions with mixed monolayer-protected gold nanoparticles containing zinc(II)–dipicolylamine complexes

• Lena Reinke,
• Julia Bartl,
• Marcus Koch and
• Stefan Kubik

Beilstein J. Org. Chem. 2020, 16, 2687–2700, doi:10.3762/bjoc.16.219

• sensing [1][2][3][4][5][6]. The analyte can be detected by relying on the enhancement of the Raman scattering intensity, if it is bound close to the gold surface (surface enhanced Raman scattering, SERS), for example, or by the release from the metal surface of a chromophore the fluorescence of which is

Synthesis and characterization of S,N-heterotetracenes

• Astrid Vogt,
• Florian Henne,
• Christoph Wetzel,
• Elena Mena-Osteritz and
• Peter Bäuerle

Beilstein J. Org. Chem. 2020, 16, 2636–2644, doi:10.3762/bjoc.16.214

• step, an azide group was introduced to 10 by lithiation with n-BuLi followed by the reaction with tosyl azide giving azide 11 in an excellent yield of 92%. Thermally induced ring-closure under release of nitrogen and formation of a nitrene intermediate was achieved by refluxing azide 11 in

Activation of pentafluoropropane isomers at a nanoscopic aluminum chlorofluoride: hydrodefluorination versus dehydrofluorination

• Maëva-Charlotte Kervarec,
• Thomas Braun,
• Mike Ahrens and
• Erhard Kemnitz

Beilstein J. Org. Chem. 2020, 16, 2623–2635, doi:10.3762/bjoc.16.213

• generated from 1 at the ACF surface. Alternatively, the aromatic solvent can also attack the carbenium-like species, producing a zwitterionic Wheeland intermediate, which can release the Friedel–Crafts product 11 and DF to regenerate the catalyst (Scheme 3, right). Although a hydrogen source was not needed

Anion exchange resins in phosphate form as versatile carriers for the reactions catalyzed by nucleoside phosphorylases

• Julia N. Artsemyeva,
• Ekaterina A. Remeeva,
• Tatiana N. Buravskaya,
• Irina D. Konstantinova,
• Roman S. Esipov,
• Anatoly I. Miroshnikov,
• Natalia M. Litvinko and
• Igor A. Mikhailopulo

Beilstein J. Org. Chem. 2020, 16, 2607–2622, doi:10.3762/bjoc.16.212

• riboside and cladribine. A number of anion exchange resins have been tested, and as a result, it was found that QAE Sephadex A-25-nPi can effectively perform two functions, viz., serve as a donor of inorganic phosphate in the phosphorolysis reaction, and also bind PF-1Pi and release it in the nucleoside

Leveraging glycomics data in glycoprotein 3D structure validation with Privateer

• Haroldas Bagdonas,
• Daniel Ungar and
• Jon Agirre

Beilstein J. Org. Chem. 2020, 16, 2523–2533, doi:10.3762/bjoc.16.204

• carbohydrate validation tool available as part of the CCP4i2 crystallographic structure solution pipeline [38]. In its first release, Privateer was able to perform stereochemical and conformational validation of pyranosides, analyse the glycan fit to electron density map and offered tools for restraining a

• glycoproteins [42]. The mass spectrometric analysis of glycosylated proteins can be with (glycomics) or without (glycoproteomics) the release of oligosaccharides from the glycoprotein. Usually, glycomics and glycoproteomics experiments are carried out together to obtain a complete description of the

NMR Spectroscopy of supramolecular chemistry on protein surfaces

• Peter Bayer,
• Anja Matena and
• Christine Beuck

Beilstein J. Org. Chem. 2020, 16, 2505–2522, doi:10.3762/bjoc.16.203

• complex. Competition of the ligand for the peptide resulted in release of unbound PHD domain, which is evident from the signals shifting back towards the position of the free protein in the absence of peptide. The Crowley lab has conducted multiple binding model studies comparing binding of sulfonato and

Recent developments in enantioselective photocatalysis

• Callum Prentice,
• James Morrisson,
• Andrew D. Smith and
• Eli Zysman-Colman

Beilstein J. Org. Chem. 2020, 16, 2363–2441, doi:10.3762/bjoc.16.197

• catalyst 105, to generate intermediate 106, which can then turn over the NHC and release the desired acylated products 107 in good yields and enantioselectivities (13 examples, up to 96:4 er). There has been little development of enantioselective reactions using NHCs in photocatalysis since this work

A proposed sustainability index for synthesis plans based on input provenance and output fate: application to academic and industrial synthesis plans for vanillin as a case study

• John Andraos

Beilstein J. Org. Chem. 2020, 16, 2346–2362, doi:10.3762/bjoc.16.196

• than can be chemically converted to starting materials, or byproducts that can be reclaimed for use in other chemical processes. Non-valorized waste outputs are those that will end up as “dead waste” whether or not they undergo treatment before release into the four main environmental compartments of