Synthesis and characterization of a isothiouronium-calix[4]arene derivative: self-assembly and anticancer activity

• Giuseppe Granata,
• Loredana Ferreri,
• Claudia Giovanna Leotta,
• Giovanni Mario Pitari and
• Grazia Maria Letizia Consoli

Beilstein J. Org. Chem. 2025, 21, 2535–2541, doi:10.3762/bjoc.21.195

• [7], cyclic peptides [8], cucurbiturils [9], resorcinarenes [10], pillarenes [11], prismarenes [12], and calix[n]arenes have proven to be particularly valuable. Calix[n]arenes, a family of polyphenolic macrocyclic oligomers, are widely utilized in applications ranging from materials science to life

Isoorotamide-based peptide nucleic acid nucleobases with extended linkers aimed at distal base recognition of adenosine in double helical RNA

• Grant D. Walby,
• Brandon R. Tessier,
• Tristan L. Mabee,
• Jennah M. Hoke,
• Hallie M. Bleam,
• Angelina Giglio-Tos,
• Emily E. Harding,
• Vladislavs Baskevics,
• Martins Katkevics,
• Eriks Rozners and
• James A. MacKay

Beilstein J. Org. Chem. 2025, 21, 2513–2523, doi:10.3762/bjoc.21.193

• including regulation and catalysis [1][2][3][4][5][6]. As a result, targeting ncRNA through molecular recognition would afford important tools for molecular biology and biotechnology [7]. One approach focuses on recognition of double-helical regions of RNA (dhRNA) using oligomers called triplex-forming

• . Further, we intentionally varied the linker length from 4 to 6 atoms. We describe herein the synthesis of the individual monomers, their incorporation into PNA oligomers, and the evaluation of those oligomers through UV-melting experiments. Results and Discussion Synthesis of Db PNA monomers Db1 Synthesis

Synthesis of N-doped chiral macrocycles by regioselective palladium-catalyzed arylation

• Shuhai Qiu and
• Junzhi Liu

Beilstein J. Org. Chem. 2025, 21, 1917–1923, doi:10.3762/bjoc.21.149

• bromide (see Supporting Information File 1). Subsequent Buchwald–Hartwig reaction with 1,3-dibromo-7-tert-butylpyrene (2) gave the [2 + 2] macrocyclic precursors 3a,b as the major product in 16%/10% yields, and trace amounts of higher oligomers as detected by mass spectrometry. Notably, compounds 3a,b

Synthesis of optically active folded cyclic dimers and trimers

• Ena Kumamoto,
• Kana Ogawa,
• Kazunori Okamoto and
• Yasuhiro Morisaki

Beilstein J. Org. Chem. 2025, 21, 1603–1612, doi:10.3762/bjoc.21.124

• -shifted compared with that of (Sp)-6 because of the bent structure of the p-phenylene–ethynylene moieties in (Sp)-6 and extended π-conjugation of (Sp)-7. Such a red-shift of a UV–vis absorption spectrum has been observed in previously reported [2.2]paracyclophane-based cyclic oligomers [39]. CHCl3

• solutions (1.0 × 10−5 M) of (Sp)-6 and (Sp)-7 were photo-excited around their absorption peak maxima, and both oligomers emitted blue fluorescence as shown in Figure 1. Their PL spectra with vibrational structures were identical, and the PL quantum efficiencies (ΦPL) of both (Sp)-6 and (Sp)-7 were estimated

• ; for example, twisted anthracene is a good CPL emitter [40][41][42][43][44][45][46][47]; the more the anthracene is twisted, the better the CPL properties [46]. As for the π-stacked cyclic oligomers, the trimers and tetramers exhibited good CPL properties, whereas the cyclic dimer consisting of curved

Selective monoformylation of naphthalene-fused propellanes for methylene-alternating copolymers

• Kenichi Kato,
• Tatsuki Hiroi,
• Seina Okada,
• Shunsuke Ohtani and
• Tomoki Ogoshi

Beilstein J. Org. Chem. 2025, 21, 1183–1191, doi:10.3762/bjoc.21.95

• interactions between the naphthalene units. The monoformyl products are reduced to corresponding alcohols, which are then reacted under Friedel–Crafts conditions. Amorphous methylene-alternating copolymers are obtained without particular macrocyclic oligomers. Due to the 3D components, the linear copolymers

• well with the observed reactivities and selectivity. Attempted macrocyclization leading to linear polymers Formyl groups have diverse reactivities and enable facile condensation, dynamic covalent chemistry, and so on. In this work, we tried the synthesis of cyclic oligomers composed of naphthalene

• molecular weights. These results implied that formation of well-defined cyclic oligomers was quite limited. To increase the well-defined species, [4.3.3]_CH2OH was separated into two enantiopure fractions (Supporting Information File 1, Figure S505), one of which was used for the acid-mediated reaction

On the photoluminescence in triarylmethyl-centered mono-, di-, and multiradicals

• Daniel Straub,
• Markus Gross,
• Mona E. Arnold,
• Julia Zolg and
• Alexander J. C. Kuehne

Beilstein J. Org. Chem. 2025, 21, 964–998, doi:10.3762/bjoc.21.80

Acyclic cucurbit[n]uril bearing alkyl sulfate ionic groups

• Christian Akakpo,
• Peter Y. Zavalij and
• Lyle Isaacs

Beilstein J. Org. Chem. 2025, 21, 717–726, doi:10.3762/bjoc.21.55

• modular synthesis, acyclic CB[n] can be easily modified synthetically [42][43][44][45][46][47][61]. Acyclic CB[n]-type receptors featuring different length glycoluril oligomers (monomer–pentamer) and different aromatic walls (e.g., naphthalene, anthracene, triptycene) have been studied [42][62][63][64][65

Beyond symmetric self-assembly and effective molarity: unlocking functional enzyme mimics with robust organic cages

• Keith G. Andrews

Beilstein J. Org. Chem. 2025, 21, 421–443, doi:10.3762/bjoc.21.30

• substrate reactivity [64]. Cyclodextrins, cucurbiturils, cavitands, and calixarenes are representative [64][65][66][67][68][69][70], and typical features of these macrocycles are high symmetry and a hydrophobic cavity with polar edge groups. They tend to be synthesized as covalent cyclic oligomers in

Oxidation of [3]naphthylenes to cations and dications converts local paratropicity into global diatropicity

• Abel Cárdenas,
• Zexin Jin,
• Yong Ni,
• Jishan Wu,
• Yan Xia,
• Francisco Javier Ramírez and
• Juan Casado

Beilstein J. Org. Chem. 2025, 21, 277–285, doi:10.3762/bjoc.21.20

• , it has been very insightful to study the molecular transformations associated with the generation of cationic species in conjugated aromatic oligomers displaying one-dimensional π-electron delocalization [1]. Oligothiophenes [2] and oligo(para-phenylene vinylenes) [3] have been used as models of

• antiaromatic character of 2 compared to 1. The decrease of the oxidation potentials with increasing antiaromaticity in the neutral states is opposite to the case of aromatic oligomers [21], where molecules with greater aromatic character have higher oxidation potentials. In addition, in 1•+ and 12+ the charge

Hydrogen-bonded macrocycle-mediated dimerization for orthogonal supramolecular polymerization

• Wentao Yu,
• Zhiyao Yang,
• Chengkan Yu,
• Xiaowei Li and
• Lihua Yuan

Beilstein J. Org. Chem. 2025, 21, 179–188, doi:10.3762/bjoc.21.10

• cooperative intermolecular forces. Zinc ion-induced coordination with the macrocycle and a terpyridinium derivative enabled orthogonal polymerization, as revealed by 1H NMR, DLS, and TEM techniques. In addition, viscosity measurements showed a transition from oligomers to polymers at the critical

Controlled oligomerization of [1.1.1]propellane through radical polarity matching: selective synthesis of SF₅- and CF₃SF₄-containing [2]staffanes

• Jón Atiba Buldt,
• Wang-Yeuk Kong,
• Yannick Kraemer,
• Masiel M. Belsuzarri,
• Ansh Hiten Patel,
• James C. Fettinger,
• Dean J. Tantillo and
• Cody Ross Pitts

Beilstein J. Org. Chem. 2024, 20, 3134–3143, doi:10.3762/bjoc.20.259

• -containing [2]staffane in the solid state. Keywords: pentafluorosulfanylation; [1.1.1]propellane; radical chain oligomerization; staffanes; strain-release; Introduction In various radical additions of X–Y across [1.1.1]propellane (1), functionalized oligomers known as [n]staffanes – with n > 1, where n

HFIP as a versatile solvent in resorcin[n]arene synthesis

• Hormoz Khosravi,
• Valeria Stevens and
• Raúl Hernández Sánchez

Beilstein J. Org. Chem. 2024, 20, 2469–2475, doi:10.3762/bjoc.20.211

• manner, and from the few reports using 2-bromoresorcinol, it has been described to yield inseparable mixtures of oligomers [9][59]. Electron-withdrawing groups like carboxylic acids are another useful functional group instead of the halogen that provide a divergent route to other functional materials

Computational toolbox for the analysis of protein–glycan interactions

• Ferran Nieto-Fabregat,
• Maria Pia Lenza,
• Angela Marseglia,
• Cristina Di Carluccio,
• Antonio Molinaro,
• Alba Silipo and
• Roberta Marchetti

Beilstein J. Org. Chem. 2024, 20, 2084–2107, doi:10.3762/bjoc.20.180

• treated as flexible oligomers, allowing extensive conformational sampling of the glycoligand while maintaining glycosidic linkages within predetermined, energetically favorable minima to ensure biophysically realistic carbohydrate structures. GlycanDock handles the flexibility and complexity of glycans

Harnessing the versatility of hydrazones through electrosynthetic oxidative transformations

• Aurélie Claraz

Beilstein J. Org. Chem. 2024, 20, 1988–2004, doi:10.3762/bjoc.20.175

• platinum cathode materials at 55 °C with a minimal amount of sodium methoxide, thereby limiting side products formation such as 133–135 or some oligomers of ethylenes (Scheme 28) [77]. In 2002, Okimoto et al. reported the indirect electrochemical oxidation of benzilhydrazones 138 using potassium iodide as

Introduction of peripheral nitrogen atoms to cyclo-meta-phenylenes

• Koki Ikemoto and
• Hiroyuki Isobe

Beilstein J. Org. Chem. 2024, 20, 1207–1212, doi:10.3762/bjoc.20.103

• . However, a MALDI-TOF MS analysis of the crude mixture showed that macrocyclisation did not complete to afford a complex mixture containing noncyclic, linear oligomers (Figure S1, Supporting Information File 1). After examining the Pd-catalysts, we found that macrocyclisation with PdCl2(dppf)·CH2Cl2 worked

Activity assays of NnlA homologs suggest the natural product N-nitroglycine is degraded by diverse bacteria

• Kara A. Strickland,
• Brenda Martinez Rodriguez,
• Ashley A. Holland,
• Shelby Wagner,
• Michelle Luna-Alva,
• David E. Graham and
• Jonathan D. Caranto

Beilstein J. Org. Chem. 2024, 20, 830–840, doi:10.3762/bjoc.20.75

• contaminants but are either undissociated higher oligomer states or are oligomers whose formation is induced by SDS treatment, which has been observed for other proteins [29][30]. To characterize these oligomer states of native protein, analytical size exclusion chromatography data were collected (Figure 2B

Switchable molecular tweezers: design and applications

• Pablo Msellem,
• Maksym Dekthiarenko,
• Nihal Hadj Seyd and
• Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin

• Jon Lundstrøm,
• Emilie Gillon,
• Valérie Chazalet,
• Nicole Kerekes,
• Antonio Di Maio,
• Ten Feizi,
• Yan Liu,
• Annabelle Varrot and
• Daniel Bojar

Beilstein J. Org. Chem. 2024, 20, 306–320, doi:10.3762/bjoc.20.31

• , there are still significant gaps in our understanding. Further, in general, few melon lectins have been studied in detail. Some reports indicate the presence of chitooligosaccharide-binding (i.e., β1-4 GlcNAc oligomers) lectins from phloem exudates of melons [16][17], as well as R-type lectins in bitter

Anion–π catalysis on carbon allotropes

• M. Ángeles Gutiérrez López,
• Mei-Ling Tan,
• Giacomo Renno,
• Augustina Jozeliūnaitė,
• J. Jonathan Nué-Martinez,
• Javier Lopez-Andarias,
• Naomi Sakai and
• Stefan Matile

Beilstein J. Org. Chem. 2023, 19, 1881–1894, doi:10.3762/bjoc.19.140

• level. Compared to the sulfoxides in 46, the catalytic activity of dyad 47 decreased rather than increased despite stronger π acidity. Supported by computational predictions [80][81], record activities in anion–π catalysis with fullerene dimers called for higher oligomers. However, synthetic efforts

• were not fruitful, mostly due to poor solubility. Anion–π catalysis on carbon nanotubes With fullerenes confirmed as privileged scaffold for induced anion–π catalysis but higher oligomers inaccessible [12][67][80], the obvious next move was to switch to carbon nanotubes. Compared to the sixty free

Construction of hexabenzocoronene-based chiral nanographenes

• Ranran Li,
• Di Wang,
• Shengtao Li and
• Peng An

Beilstein J. Org. Chem. 2023, 19, 736–751, doi:10.3762/bjoc.19.54

• on representative examples of HBC-based chiral molecular NGs. All the examples in the context can be treated either as HBC-like monomers, or HBC-based dimers, trimers, tetramers, or oligomers. The synthesis of HBC is shown in Scheme 1. Pioneered by Scholl [30] and Clar [31] and further developed by

Synthesis, structure, and properties of switchable cross-conjugated 1,4-diaryl-1,3-butadiynes based on 1,8-bis(dimethylamino)naphthalene

• Semyon V. Tsybulin,
• Ekaterina A. Filatova,
• Alexander F. Pozharskii,
• Valery A. Ozeryanskii and
• Anna V. Gulevskaya

Beilstein J. Org. Chem. 2023, 19, 674–686, doi:10.3762/bjoc.19.49

• two 7-(arylethynyl)-1,8-bis(dimethylamino)naphthalene fragments was prepared via the Glaser–Hay oxidative dimerization of 2-ethynyl-7-(arylethynyl)-1,8-bis(dimethylamino)naphthalenes. The oligomers synthesized in this way are cross-conjugated systems, in which two conjugation pathways are possible: π

• the extent of π-conjugation and the efficiency of particular donor–acceptor conjugation path in these new compounds. X-ray structures and absorption spectra of doubly protonated tetrafluoroborate salts of the oligomers are also discussed. Keywords: 1,8-bis(dimethylamino)naphthalene; cross-conjugated

• systems; 1,4-diaryl-1,3-butadiynes; donor–acceptor systems; Glaser–Hay reaction; Introduction π-Conjugated oligomers and polymers attracted considerable attention from the very start as a promising class of semiconductors, chemosensors, and various electronic devices [1][2]. Although silicon and

Combretastatins D series and analogues: from isolation, synthetic challenges and biological activities

• Jorge de Lima Neto and
• Paulo Henrique Menezes

Beilstein J. Org. Chem. 2023, 19, 399–427, doi:10.3762/bjoc.19.31

• -OMe-corniculatolide A (5) in a 50% overall yield after 4 steps (Scheme 31) [69]. The authors did not isolate dimers or oligomers using this strategy and attributed this fact to the slow addition of the acyclic precursor 159 to a solution of Ph3P and DIAD (2.5 mM in PhMe). Using a similar strategy, the

Investigation of cationic ring-opening polymerization of 2-oxazolines in the “green” solvent dihydrolevoglucosenone

• Solomiia Borova and
• Robert Luxenhofer

Beilstein J. Org. Chem. 2023, 19, 217–230, doi:10.3762/bjoc.19.21

• for most POx, accordingly, it was used successfully only for the polymerization of EtOx [34]. Correia et al. used supercritical carbon dioxide for the synthesis of 2-oxazoline-based oligomers with antimicrobial properties and applied boron trifluoride etherate as the initiator [35]. However, carbamic

Preparation of β-cyclodextrin-based dimers with selectively methylated rims and their use for solubilization of tetracene

• Konstantin Lebedinskiy,
• Volodymyr Lobaz and
• Jindřich Jindřich

Beilstein J. Org. Chem. 2022, 18, 1596–1606, doi:10.3762/bjoc.18.170

• better effectiveness than other tested supramolecular hosts. Keywords: cyclodextrin; dimer; methylation; solubilization; tetracene; Introduction Cyclodextrins (CDs) are cyclic oligomers of glucose that play an important role in supramolecular chemistry [1]. The structure of any CD contains a

Oxa-Michael-initiated cascade reactions of levoglucosenone

• Julian Klepp,
• Thomas Bousfield,
• Hugh Cummins,
• Sarah V. A.-M. Legendre,
• Jason E. Camp and
• Ben W. Greatrex

Beilstein J. Org. Chem. 2022, 18, 1457–1462, doi:10.3762/bjoc.18.151

• processes in 1, such as the Baylis–Hillman reaction [14], and the Rauhut–Currier reaction which gives dimers such as 2 as well as higher oligomers [10][15]. An oxa-Michael-initiated three-component intermolecular reaction of 1 with furfural and water has been reported to result in enone 3 (Figure 1) [16