Highly selective Diels–Alder and Heck arylation reactions in a divergent synthesis of isoindolo- and pyrrolo-fused polycyclic indoles from 2-formylpyrrole

• Carlos H. Escalante,
• Eder I. Martínez-Mora,
• Carlos Espinoza-Hicks,
• Alejandro A. Camacho-Dávila,
• Fernando R. Ramos-Morales,
• Francisco Delgado and
• Joaquín Tamariz

Beilstein J. Org. Chem. 2020, 16, 1320–1334, doi:10.3762/bjoc.16.113

• simplest pyrrole-fused heterocyclic aza-bridged compounds. The numerous series of pyrrolizine-containing polycycles include pyrrolo[2,1-a]isoindoles [6], pyrrolo[1,2-a]indoles [7][8][9][10] and isoindolo[2,1-a]indoles [11] (Figure 1). These three series constitute the core of natural occurring alkaloids

• 5–16). None of the series of mixtures 9a–p/10a–p corresponds to the direct products of the Diels–Alder cycloadditions, since they are derivatives resulting from the double bond isomerization of adducts 17 (i.e., migration from the pyrrole-fused exo cyclic position to the endo cyclic aromatic

• reactivity of 2-vinylpyrroles substituted by electron-withdrawing groups [34][35]. Interestingly, all the 2-vinylpyrroles, including the N-unsubstituted 16a,b or the N-substituted ones 8a and 8c–j, furnished a high endo stereoselectivity with dienophile 7c, except the N-substituted 2-acrylonitrile pyrrole 8b

Activated carbon as catalyst support: precursors, preparation, modification and characterization

• Melanie Iwanow,
• Tobias Gärtner,
• Volker Sieber and
• Burkhard König

Beilstein J. Org. Chem. 2020, 16, 1188–1202, doi:10.3762/bjoc.16.104

• amines, imines, amides, pyridine nitrogen and pyrrole nitrogen or as oxidized nitrogen species, e.g., pyridine-N-oxides [10]. Díaz-Terán et al. examined the surface of the samples (surface groups, chemical state of the elements, metal content and distribution) during the activation process of

Photocatalysis with organic dyes: facile access to reactive intermediates for synthesis

• Stephanie G. E. Amos,
• Marion Garreau,
• Luca Buzzetti and
• Jerome Waser

Beilstein J. Org. Chem. 2020, 16, 1163–1187, doi:10.3762/bjoc.16.103

• the substrate 15.1 using dibenzothiophene S-oxide (DBTSO, 15.2). Then, under visible-light irradiation, 15.3 could be reduced with PHTH (OD16) to generate an aryl radical that could further be trapped by a heteroarene 15.4, such as pyrrole or thiophene, furnishing the arylation product 15.5. Acyl

Recent applications of porphyrins as photocatalysts in organic synthesis: batch and continuous flow approaches

• Rodrigo Costa e Silva,
• Luely Oliveira da Silva,
• Aloisio de Andrade Bartolomeu,
• Timothy John Brocksom and
• Kleber Thiago de Oliveira

Beilstein J. Org. Chem. 2020, 16, 917–955, doi:10.3762/bjoc.16.83

• continuous-flow photochemistry a sustainable alternative approach being applied already by the chemical and pharmaceutical industries. Porphyrinoid is the term given for a class of organic compounds containing four pyrrole rings connected by four methylene bridges, and include porphyrin, chlorin

• reported a metal-free photoarylation of five-membered heteroarenes with aryldiazonium salts and meso-arylated porphyrin derivatives as photoredox catalyst [11]. Compounds such as furan, thiophene, and N-Boc-pyrrole derivatives were obtained by this methodology in 29–81% yields (Scheme 3). The key-step of

• to regular N4-porphyrins (with four pyrrole units), but also can occur with other porphyrinoid compounds. Porphyrins containing other heteroatoms present physicochemical and electronic properties that are quite different from regular N4-porphyrins. These structures absorb and emit light at lower

Bipyrrole boomerangs via Pd-mediated tandem cyclization–oxygenation. Controlling reaction selectivity and electronic properties

• Liliia Moshniaha,
• Marika Żyła-Karwowska,
• Joanna Cybińska,
• Piotr J. Chmielewski,
• Ludovic Favereau and
• Marcin Stępień

Beilstein J. Org. Chem. 2020, 16, 895–903, doi:10.3762/bjoc.16.81

• into boomerang-shaped N,N'-bridged α,α'-bipyrroles that are not accessible by means of conventional oxidative coupling methods (Scheme 1) [32]. Our approach is applicable to electron-deficient and sterically encumbered systems, notably those based on pyrrole derivatives fused with naphthalenediamide

• system more evenly. In the cNMInH series (n = 2, 3), the HOMO and LUMO are formed by superposition of the corresponding MOs of the monomeric NMI pyrrole (Supporting Information File 1, Figures S23 and S24). However, the LUMO has observably lower amplitudes on the bipyrrole part of the molecule, whereas a

• V (Table 3). The boomerangs with unsubstituted pyrrole α-positions (cNMI3H and cNMI2H) are characterized by significantly lower oxidation and reduction potentials than the corresponding dilactam analogues. The electrochemical data obtained for cNMI3O and cNMI2O indicate a destabilization of their

Towards triptycene functionalization and triptycene-linked porphyrin arrays

• Gemma M. Locke,
• Keith J. Flanagan and
• Mathias O. Senge

Beilstein J. Org. Chem. 2020, 16, 763–777, doi:10.3762/bjoc.16.70

• /v). Recrystallization (CHCl3/n-hexane) gave red crystals (12.5 mg, 30%). Mp >350 °C. Rf = 0.75 (SiO2, CH2Cl2/n-hexane 3:1, v/v); 1H NMR (600 MHz, CDCl3) δ 8.03–7.99 (m, 8H, α-pyrrole-H and phenyl-H), 7.88 (dd, J = 5.2, 3.0 Hz, 6H, triptycene-H), 7.72 (d, 4H, phenyl-H), 7.19 (dd, J = 5.2, 3.0 Hz, 6H

• , triptycene-H), 7.03 (d, 4H, pyrrole-H), 6.62 ppm (s, 4H, pyrrole-H); 13C NMR (151 MHz, CDCl3) δ 146.4, 144.7, 143.5, 135.0, 134.3, 132.3, 131.6, 130.9, 126.3, 126.2, 125.6, 122.5, 119.0, 92.3, 86.4, 29.8; 11B NMR (128 MHz, CDCl3) δ 0.32 (t, J = 28.7 Hz); 19F NMR (377 MHz, CDCl3) δ −145.04 (dd, J = 57.5, 28.7

Recent advances in Cu-catalyzed C(sp³)–Si and C(sp³)–B bond formation

• Balaram S. Takale,
• Ruchita R. Thakore,
• Elham Etemadi-Davan and
• Bruce H. Lipshutz

Beilstein J. Org. Chem. 2020, 16, 691–737, doi:10.3762/bjoc.16.67

• authors demonstrated a wide substrate scope, including an example of benzimidazole and pyrrole, although with varying chemical yields [69]. Recently Zhang et al. [70] explored various L22-containing (NHC)Cu catalysts by means of generating interesting nonracemic aminosilanes. In this case, they performed

Regioselectively α- and β-alkynylated BODIPY dyes via gold(I)-catalyzed direct C–H functionalization and their photophysical properties

• Takahide Shimada,
• Shigeki Mori,
• Masatoshi Ishida and
• Hiroyuki Furuta

Beilstein J. Org. Chem. 2020, 16, 587–595, doi:10.3762/bjoc.16.53

• ppm), and the β-CH resonances are in the range of 6.5 to 6.7 ppm (Figure 3). The disappearance of the α-pyrrole proton signals of 4a is notable. In the case of 3a, only a singlet signal appeared at 7.95 ppm for the α-pyrrole CH. In contrast, 6a revealed two singlet signals at 7.99 and 6.70 ppm

• , assignable to the α- and β-pyrrole CHs, respectively. The 1H NMR spectrum of the mono-substituted compound 5a represents an unsymmetrical resonance pattern similar to that of 3a with two α-CH signals at 7.97 and 7.96 ppm. The proposed structures of all BODIPY compounds were elucidated based on the

• -EBX reagents. This atom-economical method for the late-stage alkynylation of BODIPY dyes could be an alternate approach for functionalized fluorescent dyes without the need of preparing unstable halogenated pyrrole precursors. The resulting α- and β-ethynyl-substituted BODIPYs displayed distinct

Recent advances in photocatalyzed reactions using well-defined copper(I) complexes

• Mingbing Zhong,
• Xavier Pannecoucke,
• Philippe Jubault and
• Thomas Poisson

Beilstein J. Org. Chem. 2020, 16, 451–481, doi:10.3762/bjoc.16.42

• vinyl azide sensitization to allow the formation of the corresponding 2,5-disubstituted pyrrole (Scheme 34) [39]. The reaction was promoted by a visible-light irradiation (450 nm) using the complex [Cu(I)(dmp)(BINAP)]BF4, and the desired pyrrole was obtained in quantitative yield. Conclusion Over the

Room-temperature Pd/Ag direct arylation enabled by a radical pathway

• Amy L. Mayhugh and
• Christine K. Luscombe

Beilstein J. Org. Chem. 2020, 16, 384–390, doi:10.3762/bjoc.16.36

• . Results and Discussion Initial attempts to polymerize iodoindole monomer 1 using the reported conditions (Scheme 1) produced oligomers with an unanticipated coupling pattern in good yield (87%, Figure 1, Supporting Information File 1, Figure S3). The 1H NMR signals from the C2-H, C3-H on the pyrrole ring

• and the N-CH2-R on the alkyl chain indicate the product is highly branched [15]. Comparing the monomer’s spectrum to the polymer’s shows large peaks from unfunctionalized pyrrole rings at the chain ends with a ratio of interior to end groups of 1:0.57. While low molecular weight also contributes to

• the large signals from the chain ends, there are a few factors that indicate branching is occurring: firstly, the large variety in C3-H signals; secondly, the relative integration of the C2-H/C3-H signals to the N-CH2-R signals show that for every indole unit, there is less than one H on the pyrrole

Architecture and synthesis of P,N-heterocyclic phosphine ligands

• Wisdom A. Munzeiwa,
• Bernard Omondi and
• Vincent O. Nyamori

Beilstein J. Org. Chem. 2020, 16, 362–383, doi:10.3762/bjoc.16.35

• pyrrolylphosphine ligands 40 and 43 was reported by Kumar et al. [68] (Scheme 7). The condensation of pyrrole (38) with formaldehyde and the amine gave the bis(diaminomethyl)pyrrole 39, which on reaction with Ph2PH gave diphosphine pyrrole ligand 40 in good yield (90%). Following a different route, condensation of

• pyrrole (38) with diphenylketone gave diphenyl(dipyrrolyl)methane 41. Subsequent Mannich condensation reaction resulted in the pyrrole diamine 42. Refluxing a toluene solution of intermediate 42 and diphenylphosphine gave dipyrrolyldiphosphine ligand 43 in very good yield (92%). Generally, high

• ligands. Synthesis of diphosphine pyrrole ligands. Synthesis of 4,5-diazafluorenylphosphine ligands. Synthesis of thioether-containing pyridyldiphosphine ligands starting from ethylene sulfide and diphenylphosphine. Synthesis of monoterpene-derived phosphine pyridine ligands. Synthesis of N

Photocontrolled DNA minor groove interactions of imidazole/pyrrole polyamides

• Sabrina Müller,
• Jannik Paulus,
• Jochen Mattay,
• Heiko Ihmels,
• Veronica I. Dodero and
• Norbert Sewald

Beilstein J. Org. Chem. 2020, 16, 60–70, doi:10.3762/bjoc.16.8

• compounds have frequently been employed as modules, e.g., to control protein–DNA interactions. However, their use in conjunction with minor groove-binding imidazole/pyrrole (Im/Py) polyamides is yet unprecedented. Dervan-type Im/Py polyamides were equipped with an azobenzene unit, i.e., 3-(3-(aminomethyl

• acted as a building block inducing a reverse turn, which favored hydrogen bonds between the pyrrole/imidazole amide and the DNA bases. In contrast, the E-configured polyamides did not induce any ICD characteristic for minor groove binding. The incorporation of the photoswitchable azobenzene unit is a

• . A major breakthrough concerning selective small DNA-targeting molecules was the use of pyrrole/imidazole hairpin polyamides. They are conceptually derived from the natural products netropsin and distamycin A, which selectively bind to particular sequences of the DNA duplex [2][3][4]. Covalent

Facile regiodivergent synthesis of spiro pyrrole-substituted pseudothiohydantoins and thiohydantoins via reaction of [e]-fused 1H-pyrrole-2,3-diones with thiourea

• Aleksandr I. Kobelev,
• Nikita A. Tretyakov,
• Ekaterina E. Stepanova,
• Maksim V. Dmitriev,
• Michael Rubin and
• Andrey N. Maslivets

Beilstein J. Org. Chem. 2019, 15, 2864–2871, doi:10.3762/bjoc.15.280

• pyrrole-2-one fragment involving the reaction of [e]-fused 1H-pyrrole-2,3-diones with thioureas was developed. The obtained spiro pseudothiohydantoin derivatives were found to undergo a pseudothiohydantoin–thiohydantoin rearrangement. The reactions were shown to proceed under catalyst-free conditions in

• spiro-fused to a pharmacologically valuable pyrrole-2-one fragment and to investigate the scope and conditions of their PTR behavior (Scheme 2). Results and Discussion 1H-Pyrrole-2,3-diones fused at [e]-side (FPDs) 1 can be viewed as a versatile polyelectrophilic synthetic platform (Figure 2), enabling

• ] heterocycles bearing a pharmacophoric pyrrole-2-one moiety (Scheme 3) [28][29]. We employed this feature as a key step in the development of a straightforward and concise synthetic approach towards regioisomeric thiohydantoins and pseudothiohydantoins spiro-fused to a pyrrole-2-one fragment. To test the

A review of asymmetric synthetic organic electrochemistry and electrocatalysis: concepts, applications, recent developments and future directions

• Munmun Ghosh,
• Valmik S. Shinde and
• Magnus Rueping

Beilstein J. Org. Chem. 2019, 15, 2710–2746, doi:10.3762/bjoc.15.264

• a long gap, in 2006, Takano and Seki prepared a PLPy(Pd) electrode coated with a chiral poly-(N-substituted pyrrole) film having ʟ-(+)-lactic acid moieties as the optically active groups and further incorporated with palladium metal [27]. Thus prepared electrodes 21 were used for the

Synthesis of aryl-substituted thieno[3,2-b]thiophene derivatives and their use for N,S-heterotetracene construction

• Nadezhda S. Demina,
• Nikita A. Kazin,
• Nikolay A. Rasputin,
• Roman A. Irgashev and
• Gennady L. Rusinov

Beilstein J. Org. Chem. 2019, 15, 2678–2683, doi:10.3762/bjoc.15.261

• -heteroacenes, which can limit the effectiveness of semiconducting films in the case of solution-processable electronics [11]. Introducing the NH-containing moieties, e.g., pyrrole rings, followed by attaching solubilizing substituents is one of the ways to solve this problem. Thus, different types of N,S

AgNTf₂-catalyzed formal [3 + 2] cycloaddition of ynamides with unprotected isoxazol-5-amines: efficient access to functionalized 5-amino-1H-pyrrole-3-carboxamide derivatives

• Ziping Cao,
• Jiekun Zhu,
• Li Liu,
• Yuanling Pang,
• Laijin Tian,
• Xuejun Sun and
• Xin Meng

Beilstein J. Org. Chem. 2019, 15, 2623–2630, doi:10.3762/bjoc.15.255

• Analysis, Qufu 273165, P. R. China 10.3762/bjoc.15.255 Abstract A formal [3 + 2] cycloaddition between ynamides and unprotected isoxazol-5-amines has been developed in the presence of catalytic AgNTf2 in an open flask. By the protocol, a variety of functionalized 5-amino-1H-pyrrole-3-carboxamide

• derivatives can be obtained in up to 99% yield. The reaction mechanism might involve the generation of an unusual α-imino silver carbene intermediate (or a silver-stabilized carbocation) and subsequent cyclization/isomerization to build the significant pyrrole-3-carboxamide motif. The reaction features the

• use of an inexpensive catalyst, simple reaction conditions, simple work-up without column chromatographic purification for most of products and high yields. Keywords: [3 + 2] cycloaddition; isoxazole; pyrrole; silver catalysis; ynamide; Introduction Silver-catalyzed transformations of alkynes have

In search of visible-light photoresponsive peptide nucleic acids (PNAs) for reversible control of DNA hybridization

• Lei Zhang,
• Greta Linden and
• Olalla Vázquez

Beilstein J. Org. Chem. 2019, 15, 2500–2508, doi:10.3762/bjoc.15.243

• cis-form did not show any decomposition under these conditions (Figure S27C, Supporting Information File 1), unlike when the oF4Azo was grafted onto a pyrrole scaffold [48]. Next, we explored if the inclusion of oF4Azo as monomer surrogate within the PNA sequence could affect its hybridization to a

Self-assembled coordination thioether silver(I) macrocyclic complexes for homogeneous catalysis

• Zhen Cao,
• Aline Lacoudre,
• Cybille Rossy and
• Brigitte Bibal

Beilstein J. Org. Chem. 2019, 15, 2465–2472, doi:10.3762/bjoc.15.239

• of silver(I) complexes 1a–d, we investigated their performance in the cyclization [63] of alkynone 3 [63][64][65] in the presence of benzylamine, as a nucleophile (Table 2) that lead to substituted pyrrole 5. This tandem condensation/cycloisomerization was previously reported in 78% yield using AgOTf

• % were employed (Table 2, entries 2–6). Interestingly, a lower catalytic loading of 0.5 mol % allowed the isolation of 73% of pyrrole 5 in the presence of catalysts 1a and 1b (Table 2, entries 7 and 8). Under the same conditions, the catalytic efficiency of 1c and 1d was slightly lower (64–67 % yield

• acetate 70:1) to obtain pyrrole 5. X-ray structures of complex 1a, as two diastereoisomeric macrocycles (R,S-1)2·(AgOTf)2 with ligands assembled in: (a) a head-to-head fashion and, (b) a head-to-tail mode. Hydrogen atoms are omitted for clarity. X-ray structure of complex 1c, as a (R,S-1)4·(AgNO3)6 cage

Combining the Ugi-azide multicomponent reaction and rhodium(III)-catalyzed annulation for the synthesis of tetrazole-isoquinolone/pyridone hybrids

• Gerardo M. Ojeda,
• Prabhat Ranjan,
• Pavel Fedoseev,
• Lisandra Amable,
• Upendra K. Sharma,
• Daniel G. Rivera and
• Erik V. Van der Eycken

Beilstein J. Org. Chem. 2019, 15, 2447–2457, doi:10.3762/bjoc.15.237

• isoquinolones is very wide and may be extended to the preparation of complex compounds having heterocyclic moieties such as pyridone, furan, thiophene and pyrrole, as well as the corresponding benzo-fused derivatives. The developed procedure is simple, reproducible and does not require inert conditions

• rings, such as furan, benzofuran, pyrrole, benzopyrrole, thiophene, benzothiophene and naphthalene were also successfully synthesized (5d–l) in moderate to very good yields. The exceptions were the cases of indolopyridone 5i and thiazolopyridone 5k, the latter one could not be obtained even after many

1,2,3-Triazolium macrocycles in supramolecular chemistry

• Mastaneh Safarnejad Shad,
• Pulikkal Veettil Santhini and
• Wim Dehaen

Beilstein J. Org. Chem. 2019, 15, 2142–2155, doi:10.3762/bjoc.15.211

• selectivity of this receptor for chloride anion is due to the cavity size (see Figure 3) [37]. 2.2. Optical anion sensing by 1,2,3-triazolium macrocycles within porphyrin cages Various porphyrin-based host supramolecules containing hydrogen-bond donor groups such as integrated amide, urea, pyrrole, ammonium

• donors: The benefits of combining the triazolium motif with other hydrogen bond donor motifs has been explored by Sessler et al. and they have synthesized a pyrrole based tetra-1,2,3-triazolium macrocycle 10 (Figure 10) via the tetraalkylation of a triazole macrocycle originally prepared via click

• chemistry. Different hydrogen bond donors such as pyrrole N–H and benzene C–H along with the triazolium C5–H have been successfully incorporated within a single macrocyclic framework. The complex formation of anions with the hydrogen bond donors varied according to the polarity of the solvent. It was found

Characterization of two new degradation products of atorvastatin calcium formed upon treatment with strong acids

• Jürgen Krauß,
• Monika Klimt,
• Markus Luber,
• Peter Mayer and
• Franz Bracher

Beilstein J. Org. Chem. 2019, 15, 2085–2091, doi:10.3762/bjoc.15.206

• /dehydration process in the side chain), treatment with conc. aqueous hydrochloric acid gave a complex, bridged molecule under C–C-bond formation of the lactone moiety with the pyrrole, migration of the isopropyl group and loss of the carboxanilide residue. The novel degradation products were characterized by

• , no signal was observed which could be attributed to a C–H group at the pyrrole ring. The 13C NMR data showed one carbonyl resonance at 170.3 ppm, assignable to a lactone moiety. The HMBC experiment showed a cross peak between the proposed lactone carbonyl carbon and a neighboring CH-O group

• anhydrous acid conditions, the entire carboxanilide residue was removed to give the (S)-configured 4-unsubstituted pyrrole 7, as exemplified by a typical CH resonance at 6.20 ppm in the 1H NMR spectrum. This structure was further confirmed by X-ray data (see Figure 2 and Supporting Information File 1). HPLC

Identification of optimal fluorescent probes for G-quadruplex nucleic acids through systematic exploration of mono- and distyryl dye libraries

• Xiao Xie,
• Michela Zuffo,
• Marie-Paule Teulade-Fichou and
• Anton Granzhan

Beilstein J. Org. Chem. 2019, 15, 1872–1889, doi:10.3762/bjoc.15.183

• analytes. Although our results do not allow to formulate comprehensive structure–properties relationships, we identified several structural motifs, such as indole- or pyrrole-substituted distyryl dyes, as well as simple mono-stryryl dyes such as DASPMI [2-(4-(dimethylamino)styryl)-1-methylpyridinium iodide

• containing pyrrole residues (1x, 7x: blue dots in Figure 6) also demonstrate outstanding fluorescence enhancement in the presence of G4-DNA analytes (1x: up to 690-fold with TERRA; 7x: up to 220-fold with c-kit2). However, in the case for 1x, a marked loss of selectivity with respect to non-G4 analytes can

• dot distribution in the plot, the mono-styryl motif and the pyrrole substituent within the distyryl motif (1x, 7x) clearly promote the selectivity for the parallel G4 structures. On the other side, the effect of the indole motif is less clear, with most of the dyes not displaying any well-defined

Functional panchromatic BODIPY dyes with near-infrared absorption: design, synthesis, characterization and use in dye-sensitized solar cells

• Quentin Huaulmé,
• Cyril Aumaitre,
• Outi Vilhelmiina Kontkanen,
• David Beljonne,
• Alexandra Sutter,
• Gilles Ulrich,
• Renaud Demadrille and
• Nicolas Leclerc

Beilstein J. Org. Chem. 2019, 15, 1758–1768, doi:10.3762/bjoc.15.169

• synthesis of the target materials is schemed in Figure 4. To introduce the selected substitution pattern, 2,3-dimethylpyrrole 1 is first synthesized through a Trofimov reaction in a one-pot two-step reaction [29]. The condensation of the aforementioned pyrrole on para-iodobenzoyl chloride affords the

A heteroditopic macrocycle as organocatalytic nanoreactor for pyrroloacridinone synthesis in water

• Piyali Sarkar,
• Sayan Sarkar and
• Pradyut Ghosh

Beilstein J. Org. Chem. 2019, 15, 1505–1514, doi:10.3762/bjoc.15.152

• apoptotic cells, the investigation of the morphology of nuclei, the direct counting of cultivable bacteria, DNA intercalators, etc. [1][2][3][4]. Pyrrole, another biologically active heterocyclic compound, when fused with acridines affords promising bioactive pyrroloacridinone moieties demonstrating

Synthesis of pyrrolo[1,2-a]quinolines by formal 1,3-dipolar cycloaddition reactions of quinolinium salts

• Anthony Choi,
• Rebecca M. Morley and
• Iain Coldham

Beilstein J. Org. Chem. 2019, 15, 1480–1484, doi:10.3762/bjoc.15.149

• with electron-poor alkenes occurs through a stepwise conjugate addition–cyclization process [23]. We were interested in the related quinolinium ylides that, on (formal) cycloaddition would provide pyrrolo[1,2-a]quinolines as products. These are tricyclic compounds consisting of a pyrrole ring fused