Impact of multivalent charge presentation on peptide–nanoparticle aggregation

• Daniel Schöne,
• Boris Schade,
• Christoph Böttcher and
• Beate Koksch

Beilstein J. Org. Chem. 2015, 11, 792–803, doi:10.3762/bjoc.11.89

• assemblies. Results Design of the model peptides The α-helical coiled-coil folding motif combines the chemical diversity of peptides with the molecular recognition properties and structural stability of DNA, and provides a valuable and variable system for the organisation of functionalized nanoparticles [34

Synthesis of the first examples of iminosugar clusters based on cyclopeptoid cores

• Mathieu L. Lepage,
• Alessandra Meli,
• Anne Bodlenner,
• Céline Tarnus,
• Francesco De Riccardis,
• Irene Izzo and
• Philippe Compain

Beilstein J. Org. Chem. 2014, 10, 1406–1412, doi:10.3762/bjoc.10.144

• scaffold is crucial as it defines the valency, the size and the shape of the multivalent architectures. Due to their broad chemical diversity, rapid and convenient synthetic access, improved proteolytic stability and cell permeability over peptides, N-substituted glycine oligomers, called peptoids [14][15

Automated solid-phase peptide synthesis to obtain therapeutic peptides

• Veronika Mäde,
• Sylvia Els-Heindl and
• Annette G. Beck-Sickinger

Beilstein J. Org. Chem. 2014, 10, 1197–1212, doi:10.3762/bjoc.10.118

• more predictable in vivo behavior owed to their biochemical nature [7]. The extended size and the tremendous biological and chemical diversity of peptides opposed to small organic drugs opens targets for multiple applications [10]. In the last decades, the production of therapeutic peptides has been

Silver and gold-catalyzed multicomponent reactions

• Giorgio Abbiati and
• Elisabetta Rossi

Beilstein J. Org. Chem. 2014, 10, 481–513, doi:10.3762/bjoc.10.46

• great chemical diversity of the products of MCRs. Moreover, imines can participate in MCRs as electrophilic or nucleophilic partners, azadienes, dienophiles and 1,3-dipoles. All these reactions may benefit from the presence of a Lewis acid, a Brønsted acid or a transition metal catalyst. Silver

The regulation and biosynthesis of antimycins

• Ryan F. Seipke and
• Matthew I. Hutchings

Beilstein J. Org. Chem. 2013, 9, 2556–2563, doi:10.3762/bjoc.9.290

• and accepts multiple acylmalonyl-CoAs. In combination with AntE, AntDAT is the source of the large chemical diversity observed at position R2 within the antimycin family. Interestingly, S. hygroscopicus subsp. jinggangensis 5008 and S. hygroscopicus subsp. jinggangensis TL01 do not encode AntE

• , suggesting that these strains produce antimycins with less chemical diversity at the R2 position (Figure 2 and Figure 3). The KS domain catalyses the decarboxylative condensation between the aminoacyl thioester attached to AntCT2 and the 2-carboxy-acyl moiety attached to AntDACP. Next, a discrete

• acyltransferase, which catalyses a transesterification reaction resulting in the formation of a C-8 acyloxyl moiety and is responsible for generating the chemical diversity at R1 (Figure 1). AntB likely performs this reaction after assembly of the dilactone core, as wild-type levels of biosynthetic intermediates

New tridecapeptides of the theonellapeptolide family from the Indonesian sponge Theonella swinhoei

• Annamaria Sinisi,
• Barbara Calcinai,
• Carlo Cerrano,
• Henny A. Dien,
• Angela Zampella,
• Claudio D’Amore,
• Barbara Renga,
• Stefano Fiorucci and
• Orazio Taglialatela-Scafati

Beilstein J. Org. Chem. 2013, 9, 1643–1651, doi:10.3762/bjoc.9.188

• treasure troves of secondary metabolites. The chemical diversity of the isolated compounds ranges from unusual steroids (exemplified by the 4-methylene sterol theonellasterol [2][3] and truncated side-chain sulfated steroids [4]), to complex macrocyclic polyketides (as the well-known swinholide A, now a

Synthesis of a novel chemotype via sequential metal-catalyzed cycloisomerizations

• Bo Leng,
• Stephanie Chichetti,
• Shun Su,
• Aaron B. Beeler and
• John A. Porco Jr.

Beilstein J. Org. Chem. 2012, 8, 1338–1343, doi:10.3762/bjoc.8.153

• by diastereoselective Pt(II)-catalyzed enyne cycloisomerization. The chemistry reported herein illustrates the power of sequential cycloisomerization processes to provide access to novel chemotypes and chemical diversity from readily accessible building blocks [26]. Further transformations of the

• cycloisomerizations of diynyl o-benzaldehyde substrates to access novel polycyclic cyclopropanes are reported. The reaction sequence involves initial Cu(I)-mediated cycloisomerization/nucleophilic addition to an isochromene followed by diastereoselective Pt(II)-catalyzed enyne cycloisomerization. Keywords: chemical

• diversity; cycloisomerization; cyclopropane; diyne; isochromene; π-acid; Introduction Our laboratory has an ongoing interest in discovering transformations that afford novel chemotypes [1][2][3][4]. To this end, we have developed a reaction screening paradigm that enables the discovery of new reaction

Exploring chemical diversity via a modular reaction pairing strategy

• Joanna K. Loh,
• Sun Young Yoon,
• Thiwanka B. Samarakoon,
• Alan Rolfe,
• Patrick Porubsky,
• Benjamin Neuenswander,
• Gerald H. Lushington and
• Paul R. Hanson

Beilstein J. Org. Chem. 2012, 8, 1293–1302, doi:10.3762/bjoc.8.147

• . Computational analyses were employed to explore and evaluate the chemical diversity of the library. Keywords: benzoxathiazocine 1,1-dioxides; chemical diversity; informatics; nucleophilic aromatic substitution (SNAr); sultams; Introduction The demand for functionally diverse chemical libraries has emerged, as

• -donors <5), in addition to consideration of the number of rotatable bonds (<5) and polar surface area. Absorption, distribution, metabolism and excretion (ADME) properties were calculated by using the Volsurf program [39]. Cartesian grid-based chemical diversity analysis was performed according to the

• both libraries I and II demonstrated that the primary objectives set out in the library design were achieved; final masses ranged between 18–127 mg and the average final mass was 68 mg (original target being 50 mg). In silico analysis of chemical diversity and drug-likeness In silico analysis of the

Photochemistry with laser radiation in condensed phase using miniaturized photoreactors

• Elke Bremus-Köbberling,
• Arnold Gillner,
• Frank Avemaria,
• Céline Réthoré and
• Stefan Bräse

Beilstein J. Org. Chem. 2012, 8, 1213–1218, doi:10.3762/bjoc.8.135

• . Keywords: azides; chemical diversity; flow chemistry; heterocycles; laser; micro reactor; Introduction Classical combinatorial chemistry [1][2] approaches usually aim at the synthesis of multi-milligram amounts of new compounds to extend screening decks used in multiple screening campaigns [3]. An

Palladium-catalyzed substitution of (coumarinyl)methyl acetates with C-, N-, and S-nucleophiles

• Kalicharan Chattopadhyay,
• Erik Fenster,
• Alexander J. Grenning and
• Jon A. Tunge

Beilstein J. Org. Chem. 2012, 8, 1200–1207, doi:10.3762/bjoc.8.133

• the biologically active coumarin motif. This new method was utilized to prepare a 128-membered library of aminated coumarins for biological screening. Keywords: benzylation; catalysis; coumarin; chemical diversity; decarboxylative; palladium; substitution; Introduction Coumarins are privileged

Synthesis of diverse indole libraries on polystyrene resin – Scope and limitations of an organometallic reaction on solid supports

• Kerstin Knepper,
• Sylvia Vanderheiden and
• Stefan Bräse

Beilstein J. Org. Chem. 2012, 8, 1191–1199, doi:10.3762/bjoc.8.132

• limitations are presented. Keywords: chemical diversity; cross-coupling reactions; indole; Merrifield resin; Introduction Indoles are heterocyclic structures of unquestionable importance. It is well recognized that the indole moiety is a privileged structural motif found in numerous natural products, such

Synthesis of a library of tricyclic azepinoisoindolinones

• Bettina Miller,
• Shuli Mao,
• Kara M. George Rosenker,
• Joshua G. Pierce and
• Peter Wipf

Beilstein J. Org. Chem. 2012, 8, 1091–1097, doi:10.3762/bjoc.8.120

• synthesis was achieved by a subsequent alkene epoxidation and zinc-mediated aminolysis reaction. The resulting library products provided selective hits among a large number of high-throughput screens reported in PubChem, thus illustrating the utility of the novel scaffold. Keywords: chemical diversity

Synthesis and in silico screening of a library of β-carboline-containing compounds

• Kay M. Brummond,
• John R. Goodell,
• Matthew G. LaPorte,
• Lirong Wang and
• Xiang-Qun Xie

Beilstein J. Org. Chem. 2012, 8, 1048–1058, doi:10.3762/bjoc.8.117

• interested in probes of these targets. Keywords: β-carboline; biological activity; chemical diversity; diversity-oriented synthesis; in silico screening; Introduction Identification of a comprehensive set of small organic molecules capable of selectively modifying the function of biological targets

Parallel solid-phase synthesis of diaryltriazoles

• Matthias Wrobel,
• Jeffrey Aubé and
• Burkhard König

Beilstein J. Org. Chem. 2012, 8, 1027–1036, doi:10.3762/bjoc.8.115

• protein–protein interactions. Keywords: chemical diversity; Huisgen cycloaddition; library synthesis; peptidomimetics; solid phase synthesis; triazole; Introduction The α-helix was the first-described secondary structure of peptides discovered by Linus Pauling in 1951 [1]. With about 30% of the amino

The effect of the formyl group position upon asymmetric isomeric diarylethenes bearing a naphthalene moiety

• Renjie Wang,
• Shouzhi Pu,
• Gang Liu and
• Shiqiang Cui

Beilstein J. Org. Chem. 2012, 8, 1018–1026, doi:10.3762/bjoc.8.114

• solution and PMMA films. Cyclic voltammograms proved that the formyl group and its position could effectively modulate the electrochemical behaviors of these diarylethene derivatives. Keywords: chemical diversity; diarylethene; electrochemistry; formyl group; photochromism; substituent position effect

Expanding the chemical diversity of spirooxindoles via alkylative pyridine dearomatization

• Chunhui Dai,
• Bo Liang and
• Corey R. J. Stephenson

Beilstein J. Org. Chem. 2012, 8, 986–993, doi:10.3762/bjoc.8.111

• ]oxazino derivatives from N-substituted isatins and 1,3-dicarbonyl compounds with pyridine derivatives is reported. The reactions provided good to excellent yields. Further exploration of the molecular diversity of these compounds is demonstrated through Diels–Alder reactions. Keywords: chemical diversity

Parallel and four-step synthesis of natural-product-inspired scaffolds through modular assembly and divergent cyclization

• Hiroki Oguri,
• Haruki Mizoguchi,
• Hideaki Oikawa,
• Aki Ishiyama,
• Masato Iwatsuki,
• Kazuhiko Otoguro and
• Satoshi Ōmura

Beilstein J. Org. Chem. 2012, 8, 930–940, doi:10.3762/bjoc.8.105

• undertaken. Keywords: chemical diversity; divergent cyclization; indole alkaloids; modular assembly; rhodium-catalyzed cyclization–cycloaddition; skeletal and stereochemical diversity; Introduction Biologically intriguing natural products often possess cyclic scaffolds bearing dense arrays of functional

Two-directional synthesis as a tool for diversity-oriented synthesis: Synthesis of alkaloid scaffolds

• Kieron M. G. O’Connell,
• Monica Díaz-Gavilán,
• Warren R. J. D. Galloway and
• David R. Spring

Beilstein J. Org. Chem. 2012, 8, 850–860, doi:10.3762/bjoc.8.95

• particular reference to the synthesis of polycyclic alkaloid scaffolds. Keywords: alkaloids; cascade reactions; chemical diversity; diversity-oriented synthesis; Lewis acid catalysis; two-directional synthesis; Introduction Diversity-oriented synthesis (DOS) aims to prepare structurally diverse compound

Synthesis and characterization of Sant-75 derivatives as Hedgehog-pathway inhibitors

• Chao Che,
• Song Li,
• Bo Yang,
• Shengchang Xin,
• Zhixiong Yu,
• Taofeng Shao,
• Chuanye Tao,
• Shuo Lin and
• Zhen Yang

Beilstein J. Org. Chem. 2012, 8, 841–849, doi:10.3762/bjoc.8.94

• relationship of this important class of hedgehog-pathway inhibitors. Keywords: chemical diversity; diversity-oriented; hedgehog pathway; inhibitor; Sant-75; synthesis; Introduction The Hedgehog (Hh) signaling pathway plays an essential role in embryonic development and adult tissue homeostasis in metazoans

• cyclization with acetamidine to give 16. Compound 11g could be installed in single step by Ullmann coupling of 17 with 4-bromopyridine, in good yield. Substituent-modifications on the motif C In the third round of structural modifications, chemical diversity was explored by varying the nature of the

An intramolecular inverse electron demand Diels–Alder approach to annulated α-carbolines

• Zhiyuan Ma,
• Feng Ni,
• Grace H. C. Woo,
• Sie-Mun Lo,
• Philip M. Roveto,
• Scott E. Schaus and
• John K. Snyder

Beilstein J. Org. Chem. 2012, 8, 829–840, doi:10.3762/bjoc.8.93

• library of eighty-eight α-carbolines was prepared by using this robust methodology for biological evaluation. Keywords: α-carboline; chemical diversity; inverse electron demand Diels–Alder; isatin; pyrido[2,3-b]indole; 1,2,4-triazine; Introduction In comparison with the well-known β-carbolines, α

Recent developments in chemical diversity

• John A. Porco Jr

Beilstein J. Org. Chem. 2012, 8, 827–828, doi:10.3762/bjoc.8.92

• John A. Porco Jr Boston University, Department of Chemistry, 590 Commonwealth Avenue, Boston MA 02215, USA 10.3762/bjoc.8.92 Keywords: chemical diversity; Diversity-oriented synthesis (DOS) is an important field involving the synthesis of libraries of diverse small molecules for applications

• molecules obtained from DOS compound collections [1][2]. This Thematic Series of the Beilstein Journal of Organic Chemistry attempts to capture recent developments in the area of chemical diversity and highlights the development of chemical reaction methodologies, the construction of novel chemotypes, and

• participating contributions in the Thematic Series, involves the development of novel reaction methodologies as a means to access or discover new “chemotypes”. In this way, organic chemists are empowered by the paradigm of “chemical diversity as a function of novel chemical reactions”. “Recent developments in

Gold(I)-catalyzed synthesis of γ-vinylbutyrolactones by intramolecular oxaallylic alkylation with alcohols

• Michel Chiarucci,
• Mirko Locritani,
• Gianpiero Cera and
• Marco Bandini

Beilstein J. Org. Chem. 2011, 7, 1198–1204, doi:10.3762/bjoc.7.139

• activation of allylic alcohols [27][28][29][30][31] with esters [32][33][34][35][36][37]. In this direction, we targeted malonyl alcohols 1 as a readily available class of model acyclic precursors to create chemical diversity through an oxaallylic ring-closing reaction (Figure 1). It should be noted that the