One-pot nucleophilic substitution–double click reactions of biazides leading to functionalized bis(1,2,3-triazole) derivatives

• Hans-Ulrich Reissig and
• Fei Yu

Beilstein J. Org. Chem. 2023, 19, 1399–1407, doi:10.3762/bjoc.19.101

• conditions found were studied with a second model reaction in order to examine its suitability for the synthesis of potential carbohydrate mimetic precursors (Scheme 3). Sodium azide, benzyl bromide (5) and enantiopure bicyclic 1,2-oxazin-4-one derivative 6 [53] which bears a propargylic ether moiety as

Progress and challenges in the synthesis of sequence controlled polysaccharides

• Giulio Fittolani,
• Theodore Tyrikos-Ergas,
• Denisa Vargová,
• Manishkumar A. Chaube and
• Martina Delbianco

Beilstein J. Org. Chem. 2021, 17, 1981–2025, doi:10.3762/bjoc.17.129

• differences in the conformational behavior of the two analogues (β(1–3) vs β(1–4) oligomers), it was observed that the β(1–3)-mimetic was still recognized by wheat germ agglutinin and a chitinase enzyme, and could act as a moderate inhibitor of chitin hydrolysis [268]. Mannose- and rhamnose-based

Synthetic strategies of phosphonodepsipeptides

• Jiaxi Xu

Beilstein J. Org. Chem. 2021, 17, 461–484, doi:10.3762/bjoc.17.41

• phosphonodepsipeptides with C-1-hydroxyalkylphosphonic acids. Keywords: alkylation; mimetic; multicomponent condensation; peptide; phosphonopeptide; phosphonodepsipeptide; phosphonylation; Introduction Both, phosphonopeptides and phosphonodepsipeptides are phosphorus analogues of peptides [1][2][3][4][5]. The

3-Acetoxy-fatty acid isoprenyl esters from androconia of the ithomiine butterfly Ithomia salapia

• Florian Mann,
• Daiane Szczerbowski,
• Lisa de Silva,
• Melanie McClure,
• Marianne Elias and
• Stefan Schulz

Beilstein J. Org. Chem. 2020, 16, 2776–2787, doi:10.3762/bjoc.16.228

• spectrometry; mimicry; pheromones; pyrrolizidine alkaloids; Introduction The Neotropical butterfly tribe Ithomiini (Nymphalidae: Danainae) is very diverse and species-rich, with over 390 species and 50 genera [1][2] and extensively involved in Müllerian mimetic interactions [3]. Ithomiines are well suited for

• color patterns (see Supporting Information File 1, Figure S1) [4], are widely distributed, and parapatric in north-eastern Peru [5]. Despite the geographic overlap in distribution, a recent genetic study showed limited gene flow [4]. Reproductive isolation in mimetic butterflies can be driven by

Facile synthesis of 7-alkyl-1,2,3,4-tetrahydro-1,8-naphthyridines as arginine mimetics using a Horner–Wadsworth–Emmons-based approach

• Rhys A. Lippa,
• John A. Murphy and
• Tim N. Barrett

Beilstein J. Org. Chem. 2020, 16, 1617–1626, doi:10.3762/bjoc.16.134

• of base (6 equiv) was required to overcome stalling of the olefination process. Reduction to compound 16 using benzenesulfonyl hydrazide (generating diimide in situ) proceeded in 80% yield and was followed by single-pot carbamate and phosphonate deprotection to afford arginine mimetic 6 in 86% yield

Synthesis of a tubugi-1-toxin conjugate by a modulizable disulfide linker system with a neuropeptide Y analogue showing selectivity for hY1R-overexpressing tumor cells

• Rainer Kufka,
• Robert Rennert,
• Goran N. Kaluđerović,
• Lutz Weber,
• Wolfgang Richter and
• Ludger A. Wessjohann

Beilstein J. Org. Chem. 2019, 15, 96–105, doi:10.3762/bjoc.15.11

• also good discrimination against normal (non-cancerous) cells. Conclusion The highly active cytotoxin tubugi-1 was successfully conjugated to a truncated and modified neuropeptide-Y mimetic to form a new peptide–toxin conjugate (PDC 8) with a reductively cleavable disulfide linker. The tubugi-1–NPY

Targeting the Pseudomonas quinolone signal quorum sensing system for the discovery of novel anti-infective pathoblockers

• Christian Schütz and
• Martin Empting

Beilstein J. Org. Chem. 2018, 14, 2627–2645, doi:10.3762/bjoc.14.241

• ’-hydroxylaminobenzoylacetate; HHQ, 2-heptyl-4-(1H)-quinolone; HQNO, 4-hydroxy-2-heptylquinoline-N-oxide; PQS, Pseudomonas quinolone signal. Anthranilic acid (1) and derivatives thereof (2–4). Crystal structure of 6-FABA-AMP in complex with PqsA. Structures of substrate mimetic PqsA inhibitors. Structures and characteristics

Learning from B₁₂ enzymes: biomimetic and bioinspired catalysts for eco-friendly organic synthesis

• Keishiro Tahara,
• Ling Pan,
• Toshikazu Ono and
• Yoshio Hisaeda

Beilstein J. Org. Chem. 2018, 14, 2553–2567, doi:10.3762/bjoc.14.232

• inorganic arsenics to organic arsenics via methyl transfer could be an eco-friendly methodology for the detoxification of arsenic. The B12-mimetic methyl transfer reaction for the detoxification of inorganic arsenics has recently been developed. The highly toxic As2O3 was transformed to AB via TMAO under

Carbohydrate inhibitors of cholera toxin

• Vajinder Kumar and
• W. Bruce Turnbull

Beilstein J. Org. Chem. 2018, 14, 484–498, doi:10.3762/bjoc.14.34

• -tetrasaccharide 1 was made in which the recognition units, the terminal galactose and Neu5Ac, were attached onto the DCCHD scaffold. Inhibition assays of the oligosaccharide mimetic with CT and LT showed similar potency as that of natural ligands [32]. But, the alpha-sialylation was the bottleneck step in the

Phosphonic acid: preparation and applications

• Charlotte M. Sevrain,
• Mathieu Berchel,
• Hélène Couthon and
• Paul-Alain Jaffrès

Beilstein J. Org. Chem. 2017, 13, 2186–2213, doi:10.3762/bjoc.13.219

• prepare phosphohomocysteine 30 [141], the arginine mimetic 31 that was developed as a potent metallo-aminopeptidase inhibitor [142] or the aminophosphonic acid 32 [143] (Figure 10B). The mechanism of hydrolysis of diphenyl phosphonate in acidic conditions is likely different to the one occurring with

Glycoscience@Synchrotron: Synchrotron radiation applied to structural glycoscience

• Serge Pérez and
• Daniele de Sanctis

Beilstein J. Org. Chem. 2017, 13, 1145–1167, doi:10.3762/bjoc.13.114

Enantioselective addition of diphenyl phosphonate to ketimines derived from isatins catalyzed by binaphthyl-modified organocatalysts

• Hee Seung Jang,
• Yubin Kim and
• Dae Young Kim

Beilstein J. Org. Chem. 2016, 12, 1551–1556, doi:10.3762/bjoc.12.149

• properties [5], enzyme inhibition [6], peptide mimetic function [7], and herbicidal properties [8]. Since the biological activity of α-aminophosphonate derivatives is dependent upon the chirality of the α-position to the phosphorus atom, asymmetric synthesis of α-aminophosphonates has received considerable

Asymmetric α-amination of 3-substituted oxindoles using chiral bifunctional phosphine catalysts

• Qiao-Wen Jin,
• Zhuo Chai,
• You-Ming Huang,
• Gang Zou and
• Gang Zhao

Beilstein J. Org. Chem. 2016, 12, 725–731, doi:10.3762/bjoc.12.72

• spectra research in CD2Cl2. The mimetic activation mode of Mitsunobu reaction. Scale-up of the reaction and deprotection of the product. Proposed transition-state model. Catalyst screening. Optimization of conditions. Substrate scope. Supporting Information Supporting Information File 32: Experimental

Interactions of cyclodextrins and their derivatives with toxic organophosphorus compounds

• Sophie Letort,
• Sébastien Balieu,
• William Erb,
• Géraldine Gouhier and
• François Estour

Beilstein J. Org. Chem. 2016, 12, 204–228, doi:10.3762/bjoc.12.23

Lewis acid-promoted hydrofluorination of alkynyl sulfides to generate α-fluorovinyl thioethers

• Davide Bello and
• David O'Hagan

Beilstein J. Org. Chem. 2015, 11, 1902–1909, doi:10.3762/bjoc.11.205

• process that requires Lewis acid activation using BF3·Et2O and TiF4. The method gives access to a range of α-fluorovinyl thioethers, some in high stereoselectivity with the Z-isomer predominating over the E-isomer. The α-fluorovinyl thioether motif has prospects as a steric and electronic mimetic of

• example as illustrated in Figure 1, CF2-phosphonates became popular mimetics of the phosphate group [3][4], and vinyl fluorides were developed as analogues of the amide bond [5]. Difluorotoluene has proved to be a good spacial mimetic of the thymine base in thymidine, and has been shown to act as a

• functional and complementary template in enzymatic DNA synthesis [6]. We have recently begun to explore synthesis methods to prepare α-fluorovinyl thioethers, to open up the possibility of exploring this motif as a mimetic for enols and enolates of biochemically relevant thioesters. Thioesters of low

Synthesis of icariin from kaempferol through regioselective methylation and para-Claisen–Cope rearrangement

• Qinggang Mei,
• Chun Wang,
• Zhigang Zhao,
• Weicheng Yuan and
• Guolin Zhang

Beilstein J. Org. Chem. 2015, 11, 1220–1225, doi:10.3762/bjoc.11.135

• relative drug preparations [5]. Icariin, icariside I (2), and their aglycone, icaritin (3) (Figure 1), possess multiple biological activities, such as anti-oxidative [6], anti-inflammatory [7], anti-osteoporotic [8], anticancer [9], neuroprotective [10], angiogenesis stimulating [11], testosterone mimetic

Probing multivalency in ligand–receptor-mediated adhesion of soft, biomimetic interfaces

• Stephan Schmidt,
• Hanqing Wang,
• Daniel Pussak,
• Simone Mosca and
• Laura Hartmann

Beilstein J. Org. Chem. 2015, 11, 720–729, doi:10.3762/bjoc.11.82

• simply mediated by the high number of ligand–receptor interactions. Keywords: bio-interfaces; cell mimetic; glycocalyx; glycopolymer; molecular recognition; RICM; specific adhesion; Introduction Vast amounts of biological processes are mediated by interactions between membrane proteins and

Synthesis of multivalent carbohydrate mimetics with aminopolyol end groups and their evaluation as L-selectin inhibitors

• Joana Salta,
• Jens Dernedde and
• Hans-Ulrich Reissig

Beilstein J. Org. Chem. 2015, 11, 638–646, doi:10.3762/bjoc.11.72

• obtained in excellent yield (Table 1, entry 3). This product is particular intriguing since it offers the possibility to generate a light-switchable divalent carbohydrate mimetic. Deprotection using HF∙pyridine complex proved to be an adequate method and all fully deprotected amides 13–15 were isolated in

• into nonasulfated carbohydrate mimetic 34. Conditions: a) 1) SO3∙DMF, DMF-d7, 3 d, rt; 2) 0.5 M NaOH, 0 °C, DOWEX® Na+; 3) dialysis, H2O. Synthesis of amides 10–12 and subsequent deprotection to give divalent compounds 13–15. Synthesis of amides 18–20 from protected serinol 16 and subsequent

Potential of acylated peptides to target the influenza A virus

• Daniel Lauster,
• Damian Pawolski,
• Julian Storm,
• Kai Ludwig,
• Rudolf Volkmer,
• Henry Memczak,
• Andreas Herrmann and
• Sumati Bhatia

Beilstein J. Org. Chem. 2015, 11, 589–595, doi:10.3762/bjoc.11.65

• not been elucidated in detail. Matsubara et al. introduced a sugar mimetic peptide, which binds to the sialic acid binding pocket of HA [13]. In order to increase the inhibitory capacity of the peptide, a stearyl group has been attached to the mimetic peptide, presumably leading to the formation of a

• study, stearylated PeBGF (C18-PeBGF) has been compared with EB, the stearylated sialic acid mimetic (C18-s2s), and the stearylated control peptide with the reverse amino acid sequence (C18-rs2s) in respect to their potential to inhibit virus mediated hemagglutination, and to lyse red blood cells

• forms even in the µm range. Amphiphilic peptides cause aggregation of viruses For the stearylated peptide s2s and the polar peptide EB binding to influenza HA has been demonstrated [13][14]. In accordance with the study of Matsubara et al. we used the reverse peptide rs2s from the sialic acid mimetic as

Synthesis of antibacterial 1,3-diyne-linked peptoids from an Ugi-4CR/Glaser coupling approach

• Martin C. N. Brauer,
• Ricardo A. W. Neves Filho,
• Bernhard Westermann,
• Ramona Heinke and
• Ludger A. Wessjohann

Beilstein J. Org. Chem. 2015, 11, 25–30, doi:10.3762/bjoc.11.4

• which are able to mimic peptide structures [7][8][9]. In addition to the mimetic function, these compounds also possess an enhanced resistance to proteolytic enzymes. The fastest method for synthesizing peptoids is the Ugi four-component reaction (U-4CR) [10][11][12]. In combination with other protocols

Synthesis of rigid p-terphenyl-linked carbohydrate mimetics

• Maja Kandziora and
• Hans-Ulrich Reissig

Beilstein J. Org. Chem. 2014, 10, 1749–1758, doi:10.3762/bjoc.10.182

• compound 15a to phenylboronic acid under standard conditions of this reaction. The desired product 18 was obtained in 81% yield (Scheme 8) and the subsequent hydrogenolysis furnished carbohydrate mimetic 19 bearing a biphenyl substituent. The smooth transformation of bicyclic compound 15a into a biphenyl

• methanol/THF. In summary, by optimizing the protective group strategy and the reductive cleavage methods we were able to prepare the desired rigid p-terphenyl-linked carbohydrate mimetic 30 in twelve steps starting from D-isoascorbic acid, but in only six steps with respect to crucial intermediate 4. The

Human dendritic cell activation induced by a permannosylated dendron containing an antigenic GM₃-lactone mimetic

• Renato Ribeiro-Viana,
• Elena Bonechi,
• Javier Rojo,
• Clara Ballerini,
• Giuseppina Comito,
• Barbara Richichi and
• Cristina Nativi

Beilstein J. Org. Chem. 2014, 10, 1317–1324, doi:10.3762/bjoc.10.133

• residues of mannose for DC targeting and one residue of an immunogenic mimetic of a carbohydrate melanoma associated antigen. The immunological assays demonstrated that the glycodendron 5 is able to induce human immature DC activation in terms of a phenotype expression of co-stimulatory molecules

• expression and MHCII. Furthermore, DCs activated by the glycodendron 5 stimulate T lymphocytes to proliferate in a mixed lymphocytes reaction (MLR). Keywords: cancer immunotherapy; DC-SIGN; DC targeting; glycodendron; GM3-lactone mimetic; multivalent glycosystems; multivalent interactions; Introduction

• conditions the available amount of lactone is below the recognition threshold and therefore scarcely effective as an immunostimulant. Several years ago [31], we reported on the conformational analysis and the synthesis of thioether 3 (Figure 1), a hydrolytically stable mimetic of the GM3-lactone 2

Automated solid-phase peptide synthesis to obtain therapeutic peptides

• Veronika Mäde,
• Sylvia Els-Heindl and
• Annette G. Beck-Sickinger

Beilstein J. Org. Chem. 2014, 10, 1197–1212, doi:10.3762/bjoc.10.118

• great success with the myristoylated insulin analog insulin determir (Levemir®) [102] and the palmitoylated incretin mimetic GLP-1 (glucagon-like peptide 1) variant liraglutide (Victoza®) [106] (Table 2). Both peptide drugs reached market approval due to their prolonged blood glucose-lowering effects

Isocyanide-based multicomponent reactions towards cyclic constrained peptidomimetics

• Gijs Koopmanschap,
• Eelco Ruijter and
• Romano V.A. Orru

Beilstein J. Org. Chem. 2014, 10, 544–598, doi:10.3762/bjoc.10.50

The diketopiperazine-fused tetrahydro-β-carboline scaffold as a model peptidomimetic with an unusual α-turn secondary structure

• Francesco Airaghi,
• Andrea Fiorati,
• Giordano Lesma,
• Manuele Musolino,
• Alessandro Sacchetti and
• Alessandra Silvani

Beilstein J. Org. Chem. 2013, 9, 147–154, doi:10.3762/bjoc.9.17

• Boltzmann distribution analysis). For compound 1a the averages of the torsion angles were φ (Cα2) = −81.5°, ψ (Cα2) = 64.5°, φ (Cα3) = 146.3°, ψ (Cα3) = 36.9°, φ (Cα4) = 120.5°, and ψ (Cα4) = −29.3°. According to the classification of α-turns in protein structures [32], compound 1a is an α-turn mimetic with