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Search for "probability" in Full Text gives 398 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Thiazolidinones: novel insights from microwave synthesis, computational studies, and potentially bioactive hybrids

  • Luan A. Martinho,
  • Victor H. J. G. Praciano,
  • Guilherme D. R. Matos,
  • Claudia C. Gatto and
  • Carlos Kleber Z. Andrade

Beilstein J. Org. Chem. 2025, 21, 2618–2636, doi:10.3762/bjoc.21.203

Graphical Abstract
  • : a) 1H NMR spectra (600 MHz, DMSO-d6) with expansions, and b) 13C NMR spectra (151 MHz, DMSO-d6) with expansions. a) Molecular structure of 3n with crystallographic labeling (50% probability displacement). b) Perspective views of intermolecular hydrogen bonds (dotted lines) of 3n. (‘) symmetry
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Published 28 Nov 2025

Isoorotamide-based peptide nucleic acid nucleobases with extended linkers aimed at distal base recognition of adenosine in double helical RNA

  • Grant D. Walby,
  • Brandon R. Tessier,
  • Tristan L. Mabee,
  • Jennah M. Hoke,
  • Hallie M. Bleam,
  • Angelina Giglio-Tos,
  • Emily E. Harding,
  • Vladislavs Baskevics,
  • Martins Katkevics,
  • Eriks Rozners and
  • James A. MacKay

Beilstein J. Org. Chem. 2025, 21, 2513–2523, doi:10.3762/bjoc.21.193

Graphical Abstract
  • with the highest probability. The snapshots in Figure 7 reveal problems with the Db bases in the binding pocket. As discussed earlier, each Db base has a linker containing an NH moiety aimed at forming a stabilizing hydrogen bond with the carbonyl from the linker of the adjacent PNA M-base. Such a
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Published 12 Nov 2025

Bioinspired total syntheses of natural products: a personal adventure

  • Zhengyi Qin,
  • Yuting Yang,
  • Nuran Yan,
  • Xinyu Liang,
  • Zhiyu Zhang,
  • Yaxuan Duan,
  • Huilin Li and
  • Xuegong She

Beilstein J. Org. Chem. 2025, 21, 2048–2061, doi:10.3762/bjoc.21.160

Graphical Abstract
  • process, which further supported the probability of the proposed biosynthetic approach. Subsequently, site-selective methylation on phenol provided 24, which further underwent O-directed demethylation to afford (12S)-hydroxymonocerin. On the other hand, a two-step protocol involving Mitsunobu reaction
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Published 09 Oct 2025

Switchable pathways of multicomponent heterocyclizations of 5-amino-1,2,4-triazoles with salicylaldehydes and pyruvic acid

  • Yana I. Sakhno,
  • Oleksander V. Buravov,
  • Kostyantyn Yu. Yurkov,
  • Anastasia Yu. Andryushchenko,
  • Svitlana V. Shishkina and
  • Valentyn A. Chebanov

Beilstein J. Org. Chem. 2025, 21, 2030–2035, doi:10.3762/bjoc.21.158

Graphical Abstract
  • are shown at 50% probability level. Diversity of heterocyclization products from reaction of aminoazoles with salicylaldehydes, and pyruvic acids. MCRs of 3-amino-5-methylthio-1,2,4-triazole (1a) and 3-amino-5-methoxy-1,2,4-triazole (1b) with salicylaldehydes 2a–f, and pyruvic acid (3). MCRs of 3
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Published 08 Oct 2025

[3 + 2] Cycloaddition of thioformylium methylide with various arylidene-azolones in the synthesis of 7-thia-3-azaspiro[4.4]nonan-4-ones

  • Daniil I. Rudik,
  • Irina V. Tiushina,
  • Anatoly I. Sokolov,
  • Alexander Yu. Smirnov,
  • Alexander R. Romanenko,
  • Alexander A. Korlyukov,
  • Andrey A. Mikhaylov and
  • Mikhail S. Baranov

Beilstein J. Org. Chem. 2025, 21, 1791–1798, doi:10.3762/bjoc.21.141

Graphical Abstract
  • would be of help in further drug design of spirocyclic scaffolds. Single crystal X-ray analysis for the compounds 6e (A), 7d (B), 8e (C) and 9e (D). Atoms are shown as thermal ellipsoids at 50% probability. All hydrogen atoms, except the one at the stereogenic center, are omitted for clarity. Synthetic
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Published 05 Sep 2025

3,3'-Linked BINOL macrocycles: optimized synthesis of crown ethers featuring one or two BINOL units

  • Somayyeh Kheirjou,
  • Jan Riebe,
  • Maike Thiele,
  • Christoph Wölper and
  • Jochen Niemeyer

Beilstein J. Org. Chem. 2025, 21, 1719–1729, doi:10.3762/bjoc.21.134

Graphical Abstract
  • bistosylates 85/6/7/8 (1.0 equiv), Cs2CO3 (2.0 equiv), CH3CN, 80 °C. Molecular structure of macrocycle (R)-Me-M16 in the solid state (hydrogen atoms are omitted for clarity and thermal ellipsoids are set at the 60% probability level). The ethylene glycol chain is partially disordered, only one component is
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Published 28 Aug 2025

Synthesis of an aza[5]helicene-incorporated macrocyclic heteroarene via oxidation of an o-phenylene-pyrrole-thiophene icosamer

  • Yusuke Matsuo,
  • Aoi Nakagawa,
  • Shu Seki and
  • Takayuki Tanaka

Beilstein J. Org. Chem. 2025, 21, 1561–1567, doi:10.3762/bjoc.21.119

Graphical Abstract
  • and nanobelt. (b) Cyclo[4]helicenylene and cyclo(oxa[5]helicenylene-biphenylene). (c) Intramolecular oxidative coupling of cyclic o-phenylene-pyrrole-thiophene dodecamers. X-ray crystal structure of 4. Thermal ellipsoids are scaled to 50% probability level. Solvent molecules and hydrogen atoms except
  • for NHs are omitted for clarity. 1H NMR spectra of 5 in DMSO-d6 (a) at room temperature and (b) at 100 °C. (a) X-ray crystal structure of 5; (left) top view, (right) side view. Thermal ellipsoids are scaled to 50% probability level. Solvent molecules and hydrogen atoms except for NHs are omitted for
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Published 31 Jul 2025

Highly distinguishable isomeric states of a tripodal arylazopyrazole derivative on graphite through electron/hole-induced switching at ambient conditions

  • Himani Malik,
  • Sudha Devi,
  • Debapriya Gupta,
  • Ankit Kumar Gaur,
  • Sugumar Venkataramani and
  • Thiruvancheril G. Gopakumar

Beilstein J. Org. Chem. 2025, 21, 1496–1507, doi:10.3762/bjoc.21.112

Graphical Abstract
  • tunneling current passing through the molecule at the tunneling junction. The electron/hole-induced switching reveals that the electron injection yields a higher switching probability than that through hole injection. It is also observed that the overall switching probability of FNAAP on the surface is
  • the number of I–V measurements used for the analysis. Thus, the ratio of the number of switching events to the number of I–V used directly corresponds to the switching probability. The following observations are noted from the statistical analysis. 1) a threshold voltage is observed for the
  • isomerization of the molecules at both positive and negative sample voltages (marked by red/blue arrow heads); 2) the switching probability increases exponentially with increasing voltage; 3) the switching probability at positive voltage is almost double than that at negative sample voltage; 4) a strong
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Published 22 Jul 2025

Wittig reaction of cyclobisbiphenylenecarbonyl

  • Taito Moribe,
  • Junichiro Hirano,
  • Hideaki Takano,
  • Hiroshi Shinokubo and
  • Norihito Fukui

Beilstein J. Org. Chem. 2025, 21, 1454–1461, doi:10.3762/bjoc.21.107

Graphical Abstract
  • beneficial for the development of advanced materials. Synthesis and structures of CBBC 1. X-ray crystal structures of (a) 3, (b) 4, and (c) 5 with thermal ellipsoids at 50% probability; all hydrogen atoms are omitted for clarity. VT 1H NMR spectra of 5 in CD2Cl2 at (a) 298 K, (b) 243 K, and (c) 203 K. Blue
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Letter
Published 14 Jul 2025

Reactions of acryl thioamides with iminoiodinanes as a one-step synthesis of N-sulfonyl-2,3-dihydro-1,2-thiazoles

  • Vladimir G. Ilkin,
  • Pavel S. Silaichev,
  • Valeriy O. Filimonov,
  • Tetyana V. Beryozkina,
  • Margarita D. Likhacheva,
  • Pavel A. Slepukhin,
  • Wim Dehaen and
  • Vasiliy A. Bakulev

Beilstein J. Org. Chem. 2025, 21, 1397–1403, doi:10.3762/bjoc.21.104

Graphical Abstract
  • from the CCDC, 12 Union Road, Cambridge CB2 1EZ, UK; Fax: +44 1223 336033; E-mail: deposit@ccdc.cam.ac.uk). Representatives of biologically active 1,2-thiazoles. Compound 3aa in thermal ellipsoids 50% probability. Synthesis of 2,5-dihydro-1,2-thiazoles. Synthesis of 2,3-dihydro-N-sulfonyl-1,2-thiazoles
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Published 10 Jul 2025

Supramolecular assembly of hypervalent iodine macrocycles and alkali metals

  • Krishna Pandey,
  • Lucas X. Orton,
  • Grayson Venus,
  • Waseem A. Hussain,
  • Toby Woods,
  • Lichang Wang and
  • Kyle N. Plunkett

Beilstein J. Org. Chem. 2025, 21, 1095–1103, doi:10.3762/bjoc.21.87

Graphical Abstract
  • CDCl3 and (CD3)2CO 1:2. Crystal structures of HIM 1 and LiBArF20 (A) and NaBArF24 (B). BARF cation is omitted for clarity. Nitrogen, oxygen, iodine, and metal (lithium or sodium) atoms are denoted by light blue, red, purple, and lavender color, respectively. Thermal ellipsoids drawn at 50% probability
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Published 30 May 2025

4-(1-Methylamino)ethylidene-1,5-disubstituted pyrrolidine-2,3-diones: synthesis, anti-inflammatory effect and in silico approaches

  • Nguyen Tran Nguyen,
  • Vo Viet Dai,
  • Luc Van Meervelt,
  • Do Thi Thao and
  • Nguyen Minh Thong

Beilstein J. Org. Chem. 2025, 21, 817–829, doi:10.3762/bjoc.21.65

Graphical Abstract
  • ellipsoids at the 30% probability level. The intramolecular hydrogen bond is shown as red dashed line. The bioavailability radar of studied compounds 5a–e. The interactions of potential drugs 5a–c in the active site of enzyme iNOS. The interactions of potential drugs 5d and 5e and control drug (DEX) in the
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Published 24 Apr 2025

Acyclic cucurbit[n]uril bearing alkyl sulfate ionic groups

  • Christian Akakpo,
  • Peter Y. Zavalij and
  • Lyle Isaacs

Beilstein J. Org. Chem. 2025, 21, 717–726, doi:10.3762/bjoc.21.55

Graphical Abstract
  • acetylcholine-type unit (Me3NCH2CH2O(C=O)R) range from 3.5 Å to 5 Å with a maximum probability of 4.4 Å [74]. Figure 6 shows Me3N+···O=C contacts that are less than 4.40 Å. The large number of contacts that are significantly shorter than 4.40 Å establishes that Me3N+···O=C cation–dipole interactions play an
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Published 03 Apr 2025

Cryptophycin unit B analogues

  • Thomas Schachtsiek,
  • Jona Voss,
  • Maren Hamsen,
  • Beate Neumann,
  • Hans-Georg Stammler and
  • Norbert Sewald

Beilstein J. Org. Chem. 2025, 21, 526–532, doi:10.3762/bjoc.21.40

Graphical Abstract
  • % probability. Synthesis of modified unit B derivatives. a) HNO3, H2SO4, 0 °C, 5 h, 48% (isolated as monohydrate); b) SOCl2, MeOH, 0 °C, 90 min, then reflux, 17 h, 95%; c) Boc2O, NEt3, MeCN, H2O, rt, 22 h, 88%; d) H2, Pd/C, MeOH, rt, 25 h, 98%; e) either: formalin, NaBH3CN, HOAc, MeOH, rt, 20 min, 37%, or
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Published 07 Mar 2025

Deep-blue emitting 9,10-bis(perfluorobenzyl)anthracene

  • Long K. San,
  • Sebastian Balser,
  • Brian J. Reeves,
  • Tyler T. Clikeman,
  • Yu-Sheng Chen,
  • Steven H. Strauss and
  • Olga V. Boltalina

Beilstein J. Org. Chem. 2025, 21, 515–525, doi:10.3762/bjoc.21.39

Graphical Abstract
  • emission (anaerobic, dashed line) spectra in cyclohexane. Top: X-ray structure of 9,10-ANTH(BnF)2, thermal ellipsoids 50% probability. Bottom: a view down the crystallographic c-axis (left) and an off-side view (right) of the solid-state packing in the X-ray structure of 9,10-ANTH(BnF)2. Two different
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Published 07 Mar 2025

Beyond symmetric self-assembly and effective molarity: unlocking functional enzyme mimics with robust organic cages

  • Keith G. Andrews

Beilstein J. Org. Chem. 2025, 21, 421–443, doi:10.3762/bjoc.21.30

Graphical Abstract
  • catalysis, rather than the more rigidly preorganized functionality required for transition-state binding. If it is easier for a cage to flex [146] or disassemble than to withstand the strain of a transition barrier, the entropic probability of effective transition-state binding is reduced (one can imagine
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Perspective
Published 24 Feb 2025

The effect of neighbouring group participation and possible long range remote group participation in O-glycosylation

  • Rituparna Das and
  • Balaram Mukhopadhyay

Beilstein J. Org. Chem. 2025, 21, 369–406, doi:10.3762/bjoc.21.27

Graphical Abstract
  • protection: The pivaloyl (OPiv) ester is another such participating ester protection with decreased migratory properties. Moreover, the intrinsic neopentyl property of the ester significantly reduces the probability of nucleophilic attack at the oxocarbenium centre instead of the anomeric carbon, thereby
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Published 17 Feb 2025

Synthesis and characterizations of highly luminescent 5-isopropoxybenzo[rst]pentaphene

  • Islam S. Marae,
  • Jingyun Tan,
  • Rengo Yoshioka,
  • Zakaria Ziadi,
  • Eugene Khaskin,
  • Serhii Vasylevskyi,
  • Ryota Kabe,
  • Xiushang Xu and
  • Akimitsu Narita

Beilstein J. Org. Chem. 2025, 21, 270–276, doi:10.3762/bjoc.21.19

Graphical Abstract
  • BPP-OiPr 3: a) top view, b) side view (thermal ellipsoids shown at 50% probability), and c) molecular packing of 3 in a unit cell. All the hydrogen atoms are omitted for clarity. a) UV–vis absorption spectra of BPP 2, BPP-OiPr 3, and BPP-dione 4 measured in toluene. Inset: magnified spectra of 2 and 3
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Published 04 Feb 2025

Hydrogen-bonded macrocycle-mediated dimerization for orthogonal supramolecular polymerization

  • Wentao Yu,
  • Zhiyao Yang,
  • Chengkan Yu,
  • Xiaowei Li and
  • Lihua Yuan

Beilstein J. Org. Chem. 2025, 21, 179–188, doi:10.3762/bjoc.21.10

Graphical Abstract
  • the macrocycle marginally influenced the new set of signals, suggesting formation of an n:n complex of H1 and G2. Job plot experiments afforded a stoichiometry of n:n (Figure S10, Supporting Information File 3), purporting the probability of 2:2 complexation in solution. A strong indication of the
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Published 17 Jan 2025

Synthesis, structure and π-expansion of tris(4,5-dehydro-2,3:6,7-dibenzotropone)

  • Yongming Xiong,
  • Xue Lin Ma,
  • Shilong Su and
  • Qian Miao

Beilstein J. Org. Chem. 2025, 21, 1–7, doi:10.3762/bjoc.21.1

Graphical Abstract
  • crystallography. Structures of compounds 1–3 and the polycyclic skeleton of 1 as mapped on a carbon schwarzite unit cell. (a) Structures of 1 in the colorless crystal; (b) structures of (P,M,P)-1 in the yellow crystal. (Carbon atoms are shown as ellipsoids at 50% probability level, in and H atoms are removed for
  • clarification). Structure of (M,P,M)-3 in the crystal of 3·CH2Cl2 (carbon and oxygen atoms are shown as grey and red ellipsoid at the level of 50% probability, and hexyl groups and hydrogen atoms are removed for clarity). UV–vis absorption spectrum (black line) and emission spectrum (blue line, excited at 400
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Published 02 Jan 2025

Reactivity of hypervalent iodine(III) reagents bearing a benzylamine with sulfenate salts

  • Beatriz Dedeiras,
  • Catarina S. Caldeira,
  • José C. Cunha,
  • Clara S. B. Gomes and
  • M. Manuel B. Marques

Beilstein J. Org. Chem. 2024, 20, 3281–3289, doi:10.3762/bjoc.20.272

Graphical Abstract
  • )benziodoxolones (BBXs) 2 with ORTEP-3 diagram of compound 2d, using 50% probability level ellipsoids. One co-crystallized water molecule was omitted for clarity. CCDC 2368436 contains the supporting crystallographic data for this paper. Scope of the different β-sulfinyl esters 4 [32][33]. Isolated yields. rt
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Published 19 Dec 2024

Efficient synthesis of fluorinated triphenylenes with enhanced arene–perfluoroarene interactions in columnar mesophases

  • Yang Chen,
  • Jiao He,
  • Hang Lin,
  • Hai-Feng Wang,
  • Ping Hu,
  • Bi-Qin Wang,
  • Ke-Qing Zhao and
  • Bertrand Donnio

Beilstein J. Org. Chem. 2024, 20, 3263–3273, doi:10.3762/bjoc.20.270

Graphical Abstract
  • along the main axes: ORTEP diagram showing 50% thermal ellipsoid probability: carbon (gray), fluorine (green), and hydrogen (white). POM textures, observed between crossed polarizers of Janus and dimer, F6, F12, G66, and G48, respectively, as representative examples. More images can be seen in
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Published 16 Dec 2024

Controlled oligomerization of [1.1.1]propellane through radical polarity matching: selective synthesis of SF5- and CF3SF4-containing [2]staffanes

  • Jón Atiba Buldt,
  • Wang-Yeuk Kong,
  • Yannick Kraemer,
  • Masiel M. Belsuzarri,
  • Ansh Hiten Patel,
  • James C. Fettinger,
  • Dean J. Tantillo and
  • Cody Ross Pitts

Beilstein J. Org. Chem. 2024, 20, 3134–3143, doi:10.3762/bjoc.20.259

Graphical Abstract
  • moieties in the asymmetric axis viewed along the b-axis. (B) The asymmetric unit of 3 at 90 K viewed along the c-axis. Thermal displacement ellipsoids depicted at 50% probability. Effect of [1.1.1]propellane (1) equivalents relative to SF5Cl on selectivitya. Effect of [1.1.1]propellane (1) equivalents
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Published 29 Nov 2024

The charge transport properties of dicyanomethylene-functionalised violanthrone derivatives

  • Sondos A. J. Almahmoud,
  • Joseph Cameron,
  • Dylan Wilkinson,
  • Michele Cariello,
  • Claire Wilson,
  • Alan A. Wiles,
  • Peter J. Skabara and
  • Graeme Cooke

Beilstein J. Org. Chem. 2024, 20, 2921–2930, doi:10.3762/bjoc.20.244

Graphical Abstract
  • dihydroxyviolanthrone. Chemical structures of 2b and 3b. Optimised ground state geometries of compounds 2 and 3 calculated using B3LYP/6-311G(d,p) in the gas phase. Views of the crystal structure of 3b (left, shows displacement ellipsoids drawn at 50% probability level, right showing the twisted conformation
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Published 13 Nov 2024

C–C Coupling in sterically demanding porphyrin environments

  • Liam Cribbin,
  • Brendan Twamley,
  • Nicolae Buga,
  • John E. O’ Brien,
  • Raphael Bühler,
  • Roland A. Fischer and
  • Mathias O. Senge

Beilstein J. Org. Chem. 2024, 20, 2784–2798, doi:10.3762/bjoc.20.234

Graphical Abstract
  • (top right) with atomic displacements at 50% probability and hydrogen atoms omitted for clarity. Bottom left: Neoplastic representation of the molecular symmetry of compound 26. Bottom right: Neoplastic representation of the molecular symmetry of compound 27. Left: packing diagram of 27 viewed normal
  • for clarity. Left: view of part 0 2 in the molecular structure of the α2β2-atropisomer, 11 in the crystal, hydrogen atoms omitted for clarity. Displacement parameters shown at 50% probability and heteroatoms labelled only. Right: view of part 0 1 of the molecular structure of the α2β2-atropisomer, 11
  • in the crystal. Displacement parameters shown at 50% probability and heteroatoms labelled only. Schematic representation of porphyrin 37 showing a doubly intercalated structure. Reaction scheme for the synthesis of OET-xBrPPs and subsequent Ni(II) metalation. Scope of arm-extended dodecasubstituted
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Published 04 Nov 2024
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