Secondary metabolites of Diaporthe cameroonensis, isolated from the Cameroonian medicinal plant Trema guineensis

• Bel Youssouf G. Mountessou,
• Élodie Gisèle M. Anoumedem,
• Blondelle M. Kemkuignou,
• Yasmina Marin-Felix,
• Frank Surup,
• Marc Stadler and
• Simeon F. Kouam

Beilstein J. Org. Chem. 2023, 19, 1555–1561, doi:10.3762/bjoc.19.112

• % B in 19.5 min and then maintaining 100% B for 5 min, flow rate 0.6 mL/min, UV–vis detection 200–640 nm) connected to a MaXis ESI-TOF mass spectrometer (Bruker) (scan range 100–2500 m/z, capillary voltage 4500 V, dry temperature 200 °C). NMR spectra were recorded at 25 °C on a Bruker (Billerica, MA

Non-noble metal-catalyzed cross-dehydrogenation coupling (CDC) involving ether α-C(sp³)–H to construct C–C bonds

• Hui Yu and
• Feng Xu

Beilstein J. Org. Chem. 2023, 19, 1259–1288, doi:10.3762/bjoc.19.94

• , radical detection, and other control experiments confirmed that the reaction proceeded through a radical oxidation process. The reaction of most substituted olefins with cyclic ethers afforded the corresponding target products with excellent yields, which provides a simple, novel, and efficient pathway to

Two new lanostanoid glycosides isolated from a Kenyan polypore Fomitopsis carnea

• Winnie Chemutai Sum,
• Sherif S. Ebada,
• Didsanutda Gonkhom,
• Cony Decock,
• Rémy Bertrand Teponno,
• Josphat Clement Matasyoh and
• Marc Stadler

Beilstein J. Org. Chem. 2023, 19, 1161–1169, doi:10.3762/bjoc.19.84

• at 0.6 mL/min and the UV–vis detection made at 210 nm and 190–600 nm. The isolates were analyzed on a MaXis ESI-TOF (time-of-flight) mass spectrometer (Bruker Daltonics) for the HRESIMS data, in the positive ionization mode. This was coupled to an Agilent 1260 series HPLC–UV system (Agilent

• min, 5% B to 100% B within 19.5 min and at 100% B for 5 min. The flow rate was maintained at 0.6 mL/min and UV–vis detection made at 200–600 nm. The calculation of the compounds’ molecular formulas was performed using the Smart Formula algorithm of the Compass DataAnalysis software (Bruker Daltonics

The effect of dark states on the intersystem crossing and thermally activated delayed fluorescence of naphthalimide-phenothiazine dyads

• Liyuan Cao,
• Xi Liu,
• Xue Zhang,
• Jianzhang Zhao,
• Fabiao Yu and
• Yan Wan

Beilstein J. Org. Chem. 2023, 19, 1028–1046, doi:10.3762/bjoc.19.79

• –acceptor dyads were prepared to study the thermally activated delayed fluorescence (TADF) properties of the dyads, from a point of view of detection of the various transient species. The photophysical properties of the dyads were tuned by changing the electron-donating and the electron-withdrawing

• states. Femtosecond transient absorption spectroscopy (fs-TA) was rarely used for the study of the photophysics of the TADF emitters [12][34][35][36][37], since it suffers from the limitation of the time window of detection (up to a few ns). On the other hand, nanosecond transient absorption spectroscopy

A fluorescent probe for detection of Hg²⁺ ions constructed by tetramethyl cucurbit[6]uril and 1,2-bis(4-pyridyl)ethene

• Xiaoqian Chen,
• Naqin Yang,
• Yue Ma,
• Xinan Yang and
• Peihua Ma

Beilstein J. Org. Chem. 2023, 19, 864–872, doi:10.3762/bjoc.19.63

• = 0.9926, and the limit of detection is 4.12 × 10−8 mol·L−1. The fluorescent probe can be used to detect the concentration of Hg2+ ions in aqueous solution, and provides a theoretical basis for the development of new fluorescent probes for detecting heavy metal ions. Keywords: 1,2-bis(4-pyridyl)ethane

• detection methods include atomic absorption spectroscopy, mass spectrometry, emission spectroscopy and electrochemical methods [4][5][6][7]. These detection methods are expensive and time-consuming, and the detection of samples becomes extremely difficult. Therefore, it is of great significance to construct

• a fluorescent probe detection system with high sensitivity, a simple detection method and at low costs [8][9][10]. Cucurbit[n]urils (Q[n]s) have a highly symmetrical rigid structure and hydrophobic cavities [11][12][13][14][15]. Cavities of different sizes can encapsulate different guest species to

Investigation of cationic ring-opening polymerization of 2-oxazolines in the “green” solvent dihydrolevoglucosenone

• Solomiia Borova and
• Robert Luxenhofer

Beilstein J. Org. Chem. 2023, 19, 217–230, doi:10.3762/bjoc.19.21

• ). Obtained data were processed with Win-GPC software. Matrix-assisted laser desorption/ionization time-of-flight mass spectra (MALDI-TOF MS) were recorded on an Autoflex II (Bruker Daltonics, Bremen, Germany) using an N2 laser (λ = 337 nm). All spectra were recorded in positive reflector mode. Detection was

Germacrene B – a central intermediate in sesquiterpene biosynthesis

• Houchao Xu and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2023, 19, 186–203, doi:10.3762/bjoc.19.18

• compound [100]. Several later reports claim the detection of “eudesma-5,7(11)-diene”, a name assigned to CAS number 869998-21-0, but neither a structure is shown nor a reference to previous work is given in these reports, leaving doubt about the stereostructure the authors of this work had in mind [101

• ][102][103]. One recent report mentions the detection of “eudesma-5,7(11)-diene”, but again no structure is shown, and the structural assignment is based on a comparison of retention indices [104]. However, the deviation between measured and reference retention index is quite large (I = 1572 vs 1543

• ), and the reference data originate from [103] in which the basis for structural assignment is unclear. Finally, one more paper assigned to CAS number 869998-21-0 mentions the detection of “eudesma-5,7(11)-diene”, but in this case the structure of 38 (Scheme 11) instead of 50 is shown, which based on a

Digyalipopeptide A, an antiparasitic cyclic peptide from the Ghanaian Bacillus sp. strain DE2B

• Adwoa P. Nartey,
• Aboagye K. Dofuor,
• Kofi B. A. Owusu,
• Anil S. Camas,
• Hai Deng,
• Marcel Jaspars and
• Kwaku Kyeremeh

Beilstein J. Org. Chem. 2022, 18, 1763–1771, doi:10.3762/bjoc.18.185

• isolated by repeated semi-preparative reversed-phase HPLC with diode array detection (0–400 nm) at retention time of 27.5 min (see Supporting Information File 1, Figures S3–S7). It was obtained as a white amorphous powder which was bright yellow when in solution. The molecular formula of 1 was determined

Inclusion complexes of the steroid hormones 17β-estradiol and progesterone with β- and γ-cyclodextrin hosts: syntheses, X-ray structures, thermal analyses and API solubility enhancements

• Alexios I. Vicatos,
• Zakiena Hoossen and
• Mino R. Caira

Beilstein J. Org. Chem. 2022, 18, 1749–1762, doi:10.3762/bjoc.18.184

• formation, complex structure, stoichiometry and association constants via the detection and measurement of small deviations in the 1H NMR chemical shifts for both host and guest molecules upon complexation. PXRD studies were generally used to detect the formation of new crystalline phases following attempts

Navigating and expanding the roadmap of natural product genome mining tools

• Friederike Biermann,
• Sebastian L. Wenski and
• Eric J. N. Helfrich

Beilstein J. Org. Chem. 2022, 18, 1656–1671, doi:10.3762/bjoc.18.178

• based on the detection of the frequently encountered biosynthetic domains [21]. As a result, a lot of effort is currently being put into the development of complementing workflows to chart the “biosynthetic dark matter” (i.e., overlooked biosynthetic pathways) that we currently cannot access

• bioinformatically [39]. State-of-the-art genome mining tools are ideally suited for the detection of assembly line-like pathways. The focus on these pathways led to a strong bias in training sets: In the MIBiG database of characterized BGCs nearly 80% of all deposited NP BGCs are PKS, NRPS, or terpene BGCs (April

• genome mining tools and discuss their underlying BGC detection principles, along with advantages and limitations of the BGC identification process. Genome mining algorithms based on hard-coded biosynthetic principles An early approach to identify NP BGCs in (meta-)genomic data sets were sequence

Rhodium-catalyzed intramolecular reductive aldol-type cyclization: Application for the synthesis of a chiral necic acid lactone

• Motoyuki Isoda,
• Kazuyuki Sato,
• Kenta Kameda,
• Kana Wakabayashi,
• Ryota Sato,
• Hideki Minami,
• Yukiko Karuo,
• Atsushi Tarui,
• Kentaro Kawai and
• Masaaki Omote

Beilstein J. Org. Chem. 2022, 18, 1642–1648, doi:10.3762/bjoc.18.176

• . eThe reaction was carried out using RhCl(PPh3)3 in THF at rt. Detection of metal-enolate and proposed mechanism of intramolecular cyclization. Synthetic route towards chiral necic acid lactone (2S,3S,4R)-2j. Conditions: a) CH3SO2NH2, AD-mix-β, t-BuOH, H2O. b) SO3·Py, Et3N, DMSO, CH2Cl2. c) DMAP, CH2Cl2

Preparation of β-cyclodextrin-based dimers with selectively methylated rims and their use for solubilization of tetracene

• Konstantin Lebedinskiy,
• Volodymyr Lobaz and
• Jindřich Jindřich

Beilstein J. Org. Chem. 2022, 18, 1596–1606, doi:10.3762/bjoc.18.170

• with Thermo Scientific Helios γ with wolfram and deuterium lamp. The wavelength range is 190–800 nm. 1H, 13C, and 2D NMR spectra were measured on Bruker Avance III HD 400 spectrometer. For TLC detection of CDs, we charred a TLC plate with 50% sulfuric acid water solution at 250 °C. UV measurements The

Solid-phase total synthesis and structural confirmation of antimicrobial longicatenamide A

• Takumi Matsumoto,
• Takefumi Kuranaga,
• Yuto Taniguchi,
• Weicheng Wang and
• Hideaki Kakeya

Beilstein J. Org. Chem. 2022, 18, 1560–1566, doi:10.3762/bjoc.18.166

• the combined-culture strategy and new labeling reagents has led to the detection and structural determination of several unprecedented secondary metabolites [5][6][7]. Longicatenamides A–D (1–4, Figure 1) are cyclic hexapeptides isolated from the combined-culture of Streptomyces sp. KUSC_F05 and T

A study of the DIBAL-promoted selective debenzylation of α-cyclodextrin protected with two different benzyl groups

• Naser-Abdul Yousefi,
• Morten L. Zimmermann and
• Mikael Bols

Beilstein J. Org. Chem. 2022, 18, 1553–1559, doi:10.3762/bjoc.18.165

• on a Bruker Solarix XR mass spectrometer analyzing TOF. Generally, NMR spectra were recorded on a 500 MHz Bruker instrument with a cryoprobe. The 800 MHz spectra were recorded at 25 °C on a Bruker Avance Neo spectrometer with 5 mm CPTXO Cryoprobe C/N-H-D optimized for direct 13C detection. Chemical

Microelectrode arrays, electrosynthesis, and the optimization of signaling on an inert, stable surface

• Kendra Drayton-White,
• Siyue Liu,
• Yu-Chia Chang,
• Sakashi Uppal and
• Kevin D. Moeller

Beilstein J. Org. Chem. 2022, 18, 1488–1498, doi:10.3762/bjoc.18.156

• detection methods that are dependent on the nature of the stable surface used and the amount of the binding partner that is placed on the surface. If one wants to do a quantitative study of binding events that involve molecules on such a stable surface, then once again a method for calibrating the signal

• chemistry used to place molecules on a microelectrode array, binding events on the surface of the array are typically monitored by using the electrodes in the array to measure current changes that are caused by that event. The method is ideal in that it allows for the "real-time" detection of the binding

• detection methods in the subsequent binding studies. The polymer network is not permeable to molecules tethered to its surface or proteins in solution. The synthetic problem was solved by using the electrodes in an array to generate chemical reagents and catalysts and then confining those reagents and

Computational model predicts protein binding sites of a luminescent ligand equipped with guanidiniocarbonyl-pyrrole groups

• Neda Rafieiolhosseini,
• Matthias Killa,
• Thorben Neumann,
• Niklas Tötsch,
• Jean-Noël Grad,
• Alexander Höing,
• Thies Dirksmeyer,
• Jochen Niemeyer,
• Christian Ottmann,
• Shirley K. Knauer,
• Michael Giese,
• Jens Voskuhl and
• Daniel Hoffmann

Beilstein J. Org. Chem. 2022, 18, 1322–1331, doi:10.3762/bjoc.18.137

• novel luminophores tailor-made for different applications. One unique, promising class of compounds, the so-called aggregation-induced emitters (AIE) have been used for a wide range of applications, e.g., in OLEDs, liquid crystals [17], stimuli responses, bioassays, protein and ion detection or imaging

Derivatives of benzo-1,4-thiazine-3-carboxylic acid and the corresponding amino acid conjugates

• Péter Kisszékelyi,
• Tibor Peňaška,
• Klára Stankovianska,
• Mária Mečiarová and
• Radovan Šebesta

Beilstein J. Org. Chem. 2022, 18, 1195–1202, doi:10.3762/bjoc.18.124

• transform into a green-blue chromophore in the presence of peroxides or redox-active metal ions under acidic conditions, creating a potential detection method for such entities [29]. Additionally, the same structure was used for the preparation of a benzo-1,4-thiazine-based cyanine chromophore, which showed

Synthesis of N-phenyl- and N-thiazolyl-1H-indazoles by copper-catalyzed intramolecular N-arylation of ortho-chlorinated arylhydrazones

• Yara Cristina Marchioro Barbosa,
• Guilherme Caneppele Paveglio,
• Claudio Martin Pereira de Pereira,
• Sidnei Moura,
• Cristiane Storck Schwalm,
• Gleison Antonio Casagrande and
• Lucas Pizzuti

Beilstein J. Org. Chem. 2022, 18, 1079–1087, doi:10.3762/bjoc.18.110

• resealable screw-cap Schlenk flask (≈10 mL volume) in the presence of a Teflon-coated magnetic stirring bar. TLC analyses were performed with Al plates covered with silica gel (SiliCycle, F254) and visualized by UV detection. Silica gel (Vetec, 0.063–0.200 mm, 70–230 mesh) was used for column chromatography

New azodyrecins identified by a genome mining-directed reactivity-based screening

• Atina Rizkiya Choirunnisa,
• Kuga Arima,
• Yo Abe,
• Noritaka Kagaya,
• Kei Kudo,
• Hikaru Suenaga,
• Junko Hashimoto,
• Manabu Fujie,
• Noriyuki Satoh,
• Kazuo Shin-ya,
• Kenichi Matsuda and
• Toshiyuki Wakimoto

Beilstein J. Org. Chem. 2022, 18, 1017–1025, doi:10.3762/bjoc.18.102

• natural products, despite their notable biological activities. Reactivity-based screening is an emerging strategy in natural products discovery, in which chemical probes are used for the specific detection of the unique functionality of interest in crude metabolites [5][6]. The reactions usually

• macrozamin [4]. Although the N2H4 generation is an advantageous reactivity of an azoxy group, to the best of our knowledge, it has not been applied for the detection of azoxy bonds in the context of natural products discovery. The azoxy bond is biosynthesized by two distinct mechanisms. The first is the

The stereochemical course of 2-methylisoborneol biosynthesis

• Binbin Gu,
• Anwei Hou and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2022, 18, 818–824, doi:10.3762/bjoc.18.82

• the genes for the biosynthesis of 1 are present in about half of the species [28], which is reflected by the frequent detection of 1 among the volatiles emitted by a large number of streptomycetes and closely related bacteria [3][4][5][6][7]. A series of side products of the 2MIBS has been identified

Thiophene/selenophene-based S-shaped double helicenes: regioselective synthesis and structures

• Mengjie Wang,
• Lanping Dang,
• Wan Xu,
• Zhiying Ma,
• Liuliu Shao,
• Guangxia Wang,
• Chunli Li and
• Hua Wang

Beilstein J. Org. Chem. 2022, 18, 809–817, doi:10.3762/bjoc.18.81

• ]. Column chromatography was carried out on silica gel (300–400 mesh). Analytical thin-layer chromatography was performed on glass plates of silica gel GF-254 with detection by UV. Standard techniques for synthesis under inert atmosphere and Schlenk glassware equipped with an 8 mm PTFE vacuum stopcock, were

Synthesis of bis-spirocyclic derivatives of 3-azabicyclo[3.1.0]hexane via cyclopropene cycloadditions to the stable azomethine ylide derived from Ruhemann's purple

• Alexander S. Filatov,
• Olesya V. Khoroshilova,
• Anna G. Larina,
• Vitali M. Boitsov and
• Alexander V. Stepakov

Beilstein J. Org. Chem. 2022, 18, 769–780, doi:10.3762/bjoc.18.77

• observed signals were at the limit of detection and whether they actually correspond to a minor diastereomer could not be ascertained unambiguously. The major product 4 was purified by recrystallization of the crude mixture from MeOH and obtained in 62% yield. The structure and relative configuration of

Terpenoids from Glechoma hederacea var. longituba and their biological activities

• Dong Hyun Kim,
• Song Lim Ham,
• Zahra Khan,
• Sun Yeou Kim,
• Sang Un Choi,
• Chung Sub Kim and
• Kang Ro Lee

Beilstein J. Org. Chem. 2022, 18, 555–566, doi:10.3762/bjoc.18.58

• . The monosaccharide of 5 was detected at 13.8 min, the same detection time (13.8 min) as ᴅ-glucopyranoside. LC–MS analysis was perfomed under the following conditions: flow rate 0.7 mL/min; 25% MeCN with 0.1% formic acid, column, Kinetex C18 column (250 mm × 4.6 mm, 5 µm, Phenomenex). Sugar analysis

• ), the reaction mixture was allowed to react again at 60 °C for 2 h. The reactant was suspended in distilled H2O (1 mL) and then partitioned with n-hexane (1 mL). The n-hexane soluble layer was analyzed using GC–MS analysis. All monosaccharides were detected at 11.3 min, the same detection time (11.3 min

Site-selective reactions mediated by molecular containers

• Rui Wang and
• Yang Yu

Beilstein J. Org. Chem. 2022, 18, 309–324, doi:10.3762/bjoc.18.35

• increasing DMSO concentration, without the detection of any monohydrolyzed product. This work further demonstrated the striking ability of the water-soluble cavitand to mediate site-selective reactions. Conclusion To summarize, we have reviewed various site-selective reactions mediated by molecular

Recent developments and trends in the iron- and cobalt-catalyzed Sonogashira reactions

• Surendran Amrutha,
• Sankaran Radhika and
• Gopinathan Anilkumar

Beilstein J. Org. Chem. 2022, 18, 262–285, doi:10.3762/bjoc.18.31

• for the effective Sonogashira coupling under aqueous conditions (Scheme 3) [22]. The coupling reaction was catalyzed by the nanoparticles in water between room temperature and 45 °C. Notably, the amount of Pd was below the detection limit. The reaction done in the presence of 1000 ppm of Pd ligated