Pauson–Khand reaction of fluorinated compounds

• Jorge Escorihuela,
• Daniel M. Sedgwick,
• Alberto Llobat,
• Mercedes Medio-Simón,
• Pablo Barrio and
• Santos Fustero

Beilstein J. Org. Chem. 2020, 16, 1662–1682, doi:10.3762/bjoc.16.138

• of fluorine-containing compounds The utility of the Pauson–Khand reaction in the preparation of polycyclic compounds bearing both nitrogenated and cyclopentenone rings, two ubiquitous domains in drugs and natural products, has been reported in various contributions using 1,n-enynes, particularly 4

Mechanochemical green synthesis of hyper-crosslinked cyclodextrin polymers

• Alberto Rubin Pedrazzo,
• Fabrizio Caldera,
• Marco Zanetti,
• Silvia Lucia Appleton,
• Nilesh Kumar Dhakar and
• Francesco Trotta

Beilstein J. Org. Chem. 2020, 16, 1554–1563, doi:10.3762/bjoc.16.127

• example, drug-delivery systems [3][4][5]: together with their capability of hosting drugs, they are biocompatible and nontoxic. In the last few years nanosponges were employed to encapsulate and release a wide variety of drugs [6][7], associated with an improvement in bioavailability and release kinetics

One-step route to tricyclic fused 1,2,3,4-tetrahydroisoquinoline systems via the Castagnoli–Cushman protocol

• Aleksandar Pashev,
• Nikola Burdzhiev and
• Elena Stanoeva

Beilstein J. Org. Chem. 2020, 16, 1456–1464, doi:10.3762/bjoc.16.121

• IV inhibitor carmegliptin (2, DPP IV) with potential for the treatment of type-II diabetes [3][4]. A comparative study on novel classes of anticancer drugs identified benzo[a]quinolizines 3 and 4 (Figure 1) to be useful for a specific inhibition of heat shock response in cancer cells, which strongly

• enhances the treatment by sensitizing cancer cells to anticancer drugs [5]. The presence of such structural pattern has driven the development of various approaches for its obtaining – based either on isolation from naturally occurring sources or through multistep synthetic routes [6]. The pyrrolo[2,1-a

An overview on disulfide-catalyzed and -cocatalyzed photoreactions

• Yeersen Patehebieke

Beilstein J. Org. Chem. 2020, 16, 1418–1435, doi:10.3762/bjoc.16.118

• ; photocatalysis; thiyl radical; Introduction Organic disulfides are often used as the skeleton for drugs, pesticides, rubber auxiliaries, polymers, and electronic materials [1]. Over the past decade, organic disulfide-involving photoreactions have attracted increasing attention. Disulfides have versatile

• as the HAT cocatalyst, to generate the tetralin skeleton, which is widely seen in drugs and pesticide synthesis (Scheme 5) [13]. Diphenyl disulfide played an important role in the [4 + 2] cycloaddition process. Without diphenyl disulfide, only the product of the [2 + 2] cycloaddition was observed

Synthesis of new fluorescent molecules having an aggregation-induced emission property derived from 4-fluoroisoxazoles

• Kazuyuki Sato,
• Akira Kawasaki,
• Yukiko Karuo,
• Atsushi Tarui,
• Kentaro Kawai and
• Masaaki Omote

Beilstein J. Org. Chem. 2020, 16, 1411–1417, doi:10.3762/bjoc.16.117

• to grow, with several fluorinated 6-membered heteroaromatic derivatives finding applications in a wide variety of drugs and plant-protective agents [15][16][17][18][19][20][21][22][23][24][25][26][27]. However, there are only a few reports on the synthesis and properties of fluorinated 5-membered

Recent synthesis of thietanes

• Jiaxi Xu

Beilstein J. Org. Chem. 2020, 16, 1357–1410, doi:10.3762/bjoc.16.116

• (Taxotere®) both are anticancer drugs of the taxoid series. They inhibit cell growth through the interaction with microtubules. In order to study the structure–activity relationships, the D-ring-modified deoxythiataxoid 154a was synthesized. For this, the iodomethyloxirane derivative 152 was first treated

[3 + 2] Cycloaddition with photogenerated azomethine ylides in β-cyclodextrin

• Margareta Sohora,
• Leo Mandić and
• Nikola Basarić

Beilstein J. Org. Chem. 2020, 16, 1296–1304, doi:10.3762/bjoc.16.110

• ]. Photodecarboxylations were also intensively investigated in a series of nonsteroidal anti-inflammatory drugs [22][23][24] such as ketoprofen [25][26][27][28][29][30][31][32][33][34], due to photoallergic responses initiated by photodecarboxylation of these drugs [35]. Stereoselectivity in photochemical reactions can be

• for solubilization of drugs or drug delivery [48], it would be interesting to investigate its effects to the photodecarboxylation reaction. Therefore, we investigated photochemical reactivity of phthalimide derivatives 1–3 (Figure 1) in solution without β-CD and in the β-CD inclusion complexes

Synthesis, antiinflammatory activity, and molecular docking studies of bisphosphonic esters as potential MMP-8 and MMP-9 inhibitors

• Abimelek Cortes-Pacheco,
• María Adelina Jiménez-Arellanes,
• Francisco José Palacios-Can,
• José Antonio Valcarcel-Gamiño,
• Rodrigo Said Razo-Hernández,
• María del Carmen Juárez-Vázquez,
• Adolfo López-Torres and
• Oscar Abelardo Ramírez-Marroquín

Beilstein J. Org. Chem. 2020, 16, 1277–1287, doi:10.3762/bjoc.16.108

• docking; organophosphorus compounds; Introduction Bisphosphonic acids (or bisphosphonates) are organophosphorus compounds characterized by a P–C–P moiety. These organic compounds are valuable drugs for the treatment of bone diseases as osteoporosis, Paget’s disease, and malignant hypercalcemia [1][2][3

• derivatives 5 and 6 where the effect of benzyl or 4-methoxybenzyl substituents was assessed (Figure 2). Furthermore, the bisphosphonic esters 3–6 passed the Lipinski’s rules [22] as criteria for drugs for an oral administration as we wanted to test these derivatives through in vivo acute inflammation models

Anthelmintic drug discovery: target identification, screening methods and the role of open science

• Frederick A. Partridge,
• Ruth Forman,
• Carole J. R. Bataille,
• Graham M. Wynne,
• Marina Nick,
• Angela J. Russell,
• Kathryn J. Else and
• David B. Sattelle

Beilstein J. Org. Chem. 2020, 16, 1203–1224, doi:10.3762/bjoc.16.105

• Pharmacology, University of Oxford, Mansfield Road, Oxford, OX1 3QT, United Kingdom 10.3762/bjoc.16.105 Abstract Helminths, including cestodes, nematodes and trematodes, are a huge global health burden, infecting hundreds of millions of people. In many cases, existing drugs such as benzimidazoles

• limited recent progress in developing new drugs for these diseases due to lack of commercial attractiveness, leading to the introduction of novel, more efficient models for drug innovation that attempt to reduce the cost of research and development. Open science aims to achieve this by encouraging

• Anthelmintic drugs is the collective term for the group of drugs which treat infections of animals or humans infected with parasitic worms (helminths). Parasitic worms infect a wide range of species and as such present a major burden on not only human health, but also livestock production and crop production

Synthesis of esters of diaminotruxillic bis-amino acids by Pd-mediated photocycloaddition of analogs of the Kaede protein chromophore

• Esteban P. Urriolabeitia,
• Pablo Sánchez,
• Alexandra Pop,
• Cristian Silvestru,
• Eduardo Laga,
• Ana I. Jiménez and
• Carlos Cativiela

Beilstein J. Org. Chem. 2020, 16, 1111–1123, doi:10.3762/bjoc.16.98

• activity, not only as antinociceptive drugs but also in the treatment of type 2 diabetes mellitus. In fact, recent results have shown that these compounds are the only non-peptidic agonists of the GLP-1R (glucagon-like peptide 1 receptor) and they have a higher stability than any other agonist prepared to

A cyclopeptide and three oligomycin-class polyketides produced by an underexplored actinomycete of the genus Pseudosporangium

• Shun Saito,
• Kota Atsumi,
• Tao Zhou,
• Keisuke Fukaya,
• Daisuke Urabe,
• Naoya Oku,
• Md. Rokon Ul Karim,
• Hisayuki Komaki and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2020, 16, 1100–1110, doi:10.3762/bjoc.16.97

• discovery of new natural products. Keywords: DFT-based calculation; oligomycin; peptide; polyketides; Pseudosporangium; rare actinomycetes; Introduction Microbial secondary metabolites have been used as therapeutic drugs [1], veterinary medicines [2], agrochemicals [3], food preservatives/colorings [4][5

Synthesis and anticancer activity of bis(2-arylimidazo[1,2-a]pyridin-3-yl) selenides and diselenides: the copper-catalyzed tandem C–H selenation of 2-arylimidazo[1,2-a]pyridine with selenium

• Mio Matsumura,
• Tsutomu Takahashi,
• Hikari Yamauchi,
• Shunsuke Sakuma,
• Yukako Hayashi,
• Tadashi Hyodo,
• Tohru Obata,
• Kentaro Yamaguchi,
• Yasuyuki Fujiwara and
• Shuji Yasuike

Beilstein J. Org. Chem. 2020, 16, 1075–1083, doi:10.3762/bjoc.16.94

• medicinal chemistry [19][20]. A number of clinically used drugs and clinical candidates, such as zolpidem, alpidem, saripidem, zolimidine, necopidem, and GSK812397 contain the imidazo[1,2-a]pyridine scaffold [21][22][23][24][25][26]. 3-(Arylselanyl)imidazo[1,2-a]pyridines IV were reported to act as

Fluorinated phenylalanines: synthesis and pharmaceutical applications

• Laila F. Awad and
• Mohammed Salah Ayoup

Beilstein J. Org. Chem. 2020, 16, 1022–1050, doi:10.3762/bjoc.16.91

• affinity and specificity for system L [58]. Accordingly, 2-[18F]FELP 95 emerged as a promising PET radiotracer for brain tumor imaging [97][98][99][100][101] (Figure 2). 5.2. Incorporation of FPhe for the synthesis of fluorinated drugs 5.2.1. Melflufen, an anticancer drug: 4-Fluoro-ʟ-phenylalanine ester is

• ][111][112][113] (Figure 5). As can be seen from the structure of 182, 3-bromo-4-fluoro-ʟ-phenylalanine (65) is required for the synthesis. 5.2.4. Antidiabetes drugs, sitagliptin: (R)-2,4,5-Trifluorophenylalanine 38b is a constituent of sitagliptin (183, Figure 6). Sitagliptin is used to decrease the

• synthesis of compound 184 [119][120] (Figure 7). Evogliptin: (R)-2,4,5-Trifluorophenylalanine 38b is required for the synthesis of evogliptin (185, Figure 8), an antidiabetic drug in the dipeptidyl peptidase-4 (DPP-4) inhibitor or "gliptin" class of drugs. The South Korean pharmaceutical company Dong-A ST

Fabclavine diversity in Xenorhabdus bacteria

• Sebastian L. Wenski,
• Harun Cimen,
• Natalie Berghaus,
• Sebastian W. Fuchs,
• Selcuk Hazir and
• Helge B. Bode

Beilstein J. Org. Chem. 2020, 16, 956–965, doi:10.3762/bjoc.16.84

• ), such as daptomycin, vancomycin, or erythromycin, have already been shown to be potent antibiotics [2][3][4]. Consequently, research in the field of novel SMs with antimicrobial activity is vital to provide new avenues to new antiinfective drugs or lead compounds. Beside traditional sources such as

Recent applications of porphyrins as photocatalysts in organic synthesis: batch and continuous flow approaches

• Rodrigo Costa e Silva,
• Luely Oliveira da Silva,
• Aloisio de Andrade Bartolomeu,
• Timothy John Brocksom and
• Kleber Thiago de Oliveira

Beilstein J. Org. Chem. 2020, 16, 917–955, doi:10.3762/bjoc.16.83

• group publication [74] on new antimalarial drugs can be highlighted (Scheme 29). The authors report a 3.4 gram-scale preparation of ascaridole, in this case a synthetic intermediate, using TPP as photocatalyst. Another example of a scaled-up endoperoxide approach involves the stereoselective singlet

Synthesis of new asparagine-based glycopeptides for future scanning tunneling microscopy investigations

• Laura Sršan and
• Thomas Ziegler

Beilstein J. Org. Chem. 2020, 16, 888–894, doi:10.3762/bjoc.16.80

• comparison with naturally occurring amino acids [14]. Thus, there is still a great effort in finding new potential drugs derived from glycopeptides [4][15]. By using preparative mass spectrometry (pMS) combined with STM on submolecular-resolution peptides and carbohydrates can be investigated regarding their

Reaction of indoles with aromatic fluoromethyl ketones: an efficient synthesis of trifluoromethyl(indolyl)phenylmethanols using K₂CO₃/n-Bu₄PBr in water

• Thanigaimalai Pillaiyar,
• Masoud Sedaghati and
• Gregor Schnakenburg

Beilstein J. Org. Chem. 2020, 16, 778–790, doi:10.3762/bjoc.16.71

• have been used as key precursors for the construction of complex indole derivatives that would be useful in pharmaceuticals as drugs and agrochemicals [2][3][4][5][6][7][8][9][10][11][12][13][14]. The simple (1H-indol-3-yl)methanol, a breakdown product of glucobrassicin, which can be found in

Recent advances in Cu-catalyzed C(sp³)–Si and C(sp³)–B bond formation

• Balaram S. Takale,
• Ruchita R. Thakore,
• Elham Etemadi-Davan and
• Bruce H. Lipshutz

Beilstein J. Org. Chem. 2020, 16, 691–737, doi:10.3762/bjoc.16.67

• incorporating silicon or boron into new or existing drugs, in addition to their use as building blocks in cross-coupling reactions en route to various targets of both natural and unnatural origins. In this review, recent protocols relying on copper-catalyzed sp3 carbon–silicon and carbon–boron bond-forming

• functional groups into existing or new drugs. Examples include the incorporation of silicon bioisosteres that help increase lipophilicity, subsequently altering the existing metabolic pathway of a drug due to differences in its physicochemical properties [8]. On the other hand, the trigonal planar nature of

• boron can lead to dative bond formation with enzymes, and therefore increase binding affinity. As shown in Scheme 1, several silicon [9][10][11][12] and boron-containing [13][14][15][16] drugs have already entered the market, or are currently in the drug development pipeline. As the number of drugs

Design and synthesis of diazine-based panobinostat analogues for HDAC8 inhibition

• Sivaraman Balasubramaniam,
• Sajith Vijayan,
• Liam V. Goldman,
• Xavier A. May,
• Kyra Dodson,
• Sweta Adhikari,
• Fatima Rivas,
• Davita L. Watkins and
• Shana V. Stoddard

Beilstein J. Org. Chem. 2020, 16, 628–637, doi:10.3762/bjoc.16.59

• [3]. Among these drugs, panobinostat (Farydak, Novartis) an FDA approved drug, has been recognized as a pan-deacetylase inhibitor [9][10]. As a hydroxamic acid pan-HDACi, it is zinc-dependent, capable of binding in a bidentate fashion to the zinc-containing catalytic domain of the HDACs, and

Opening up connectivity between documents, structures and bioactivity

• Christopher Southan

Beilstein J. Org. Chem. 2020, 16, 596–606, doi:10.3762/bjoc.16.54

• have initiated D-C feeds in PubChem but two of these, Prous Science Drugs of the Future and Nature Communications, ceased in 2012 and 2014 respectively. This has left only Nature Chemical Biology and Nature Chemistry as still active with 12481 and 15276 author-specified CID structures respectively

• seems that way). The following is a selection: 1.) PubChem presents users with the complexity of parallel systems of D-C connectivity [28]. For medical subject headings (MeSH) the publication links are biased towards common name matches in many papers (e.g., the MeSH category for chemicals and drugs

Copper-promoted/copper-catalyzed trifluoromethylselenolation reactions

• Clément Ghiazza and
• Anis Tlili

Beilstein J. Org. Chem. 2020, 16, 305–316, doi:10.3762/bjoc.16.30

• one of the most lipophilic fluorinated groups, and thus potentially increases the bioavailability of the targeted drugs [10]. The focus of this minireview is to highlight the efforts made to use copper reagents for the promotion of trifluoromethylselenolation reactions. Review Overview on copper

Two antibacterial and PPARα/γ-agonistic unsaturated keto fatty acids from a coral-associated actinomycete of the genus Micrococcus

• Amit Raj Sharma,
• Enjuro Harunari,
• Naoya Oku,
• Nobuyasu Matsuura,
• Agus Trianto and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2020, 16, 297–304, doi:10.3762/bjoc.16.29

• ), Sabouraud Dextrose Broth (Difco), and Marine Broth (Difco) were used for bacteria, yeasts, and Tenacibaculum maritimum NBRC16015, respectively. Compounds 1 and 2, the reference drugs kanamycin sulfate for bacteria, sulfamethoxazole for R. radiobacter NBRC14554 and T. maritimum NBRC16015, and amphotericin B

Recent developments in photoredox-catalyzed remote ortho and para C–H bond functionalizations

• Rafia Siddiqui and
• Rashid Ali

Beilstein J. Org. Chem. 2020, 16, 248–280, doi:10.3762/bjoc.16.26

• assembled using this strategy, as displayed in Scheme 15, and a plausible mechanism for the reaction is shown in Figure 16. C–H nitration of protected anilines Nitroanilines are an important class of compounds and found in many drugs and dyes [144]. Therefore, recently, König and co-worker reported the

Combination of multicomponent KA² and Pauson–Khand reactions: short synthesis of spirocyclic pyrrolocyclopentenones

• Riccardo Innocenti,
• Elena Lenci,
• Gloria Menchi and
• Andrea Trabocchi

Beilstein J. Org. Chem. 2020, 16, 200–211, doi:10.3762/bjoc.16.23

• characterization of the newly-synthesized molecules gave evidence about structural and physicochemical properties with respect to a set of blockbuster drugs, and showed that such scaffolds are drug-like but more spherical and three-dimensional in character than the drugs. Keywords: chemical libraries

• approved drugs [11] and that there is a significant potential to explore the chemical space of spirocyclic scaffolds, especially in the case of the condensed ones. Thus, new synthetic routes towards the synthesis of building blocks containing spiranic rings have increasingly appeared in the recent

• of compounds 3–39, in comparison with a reference set of 40 brand-name blockbuster drugs [66][67] (Figure 3), showed the different distribution of compounds 3–39 in two different clusters. Most of the compounds reside in the first cluster, positioned in the negative direction of x axis, in a region

Synthesis of 4-(2-fluorophenyl)-7-methoxycoumarin: experimental and computational evidence for intramolecular and intermolecular C–F···H–C bonds

• Vuyisa Mzozoyana,
• Fanie R. van Heerden and
• Craig Grimmer

Beilstein J. Org. Chem. 2020, 16, 190–199, doi:10.3762/bjoc.16.22

• atom in the 9α position of the structure [19]. Since then, the fluorine-containing drugs have come onto the market and they are amongst the best-selling pharmaceutical drugs, including Lipitor®, Prevacid®, Advair Discus® and Lexapro® [20][21][22]. The incorporation of fluorine may improve the activity