Production of non-natural 5-methylorsellinate-derived meroterpenoids in Aspergillus oryzae

• Jia Tang,
• Yixiang Zhang and
• Yudai Matsuda

Beilstein J. Org. Chem. 2024, 20, 638–644, doi:10.3762/bjoc.20.56

• -dependent monooxygenase InsA4. In this engineered pathway, FncE first synthesizes 5-MOA, which then undergoes farnesylation by FncB, methyl ester formation by InsA1, and epoxidation of the terminal olefin in the farnesyl moiety by InsA4 (Figure 2A). Thus, we heterologously expressed the genes encoding these

Introduction of a human- and keyboard-friendly N-glycan nomenclature

• Friedrich Altmann,
• Johannes Helm,
• Martin Pabst and
• Johannes Stadlmann

Beilstein J. Org. Chem. 2024, 20, 607–620, doi:10.3762/bjoc.20.53

• alphanumeric descriptions of the hundreds and thousands of N-glycan structures. Here, we present a system that describes N-glycans by defining their terminal elements. To minimize redundancy and length of terms, the common elements of N-glycans are taken as granted. The preset reading order facilitates

• Toronto University taught us the term GnGn for the acceptor substrate of fucosyl transferases [28][29]. This “reductio ad essentialia” proved very helpful in our work with glycosyltransferases, e.g., insect hexosaminidase [30] and plant fucosyltransferase [31], which dealt with terminal modifications of

• of glycoproteins solidified our faith in a rather universal applicability of this system [26][27]. But now, back to the meaning of “GnGn”. Gn stands for GlcNAc and the two Gn-s symbolize the two terminal residues of a biantennary N-glycan (Figure 2). The GlcNAcs are attached to the common core

Entry to new spiroheterocycles via tandem Rh(II)-catalyzed O–H insertion/base-promoted cyclization involving diazoarylidene succinimides

• Alexander Yanovich,
• Anastasia Vepreva,
• Ksenia Malkova,
• Grigory Kantin and
• Dmitry Dar’in

Beilstein J. Org. Chem. 2024, 20, 561–569, doi:10.3762/bjoc.20.48

• obtained when unsubstituted propiolic acid was used as OH-substrate (2g). The reasons for this result may be due to the increased reactivity of the terminal triple bond of the propiolic moiety, which favors the participation of the OH-insertion intermediate in side processes. However, we were unable to

Synthesis of photo- and ionochromic N-acylated 2-(aminomethylene)benzo[b]thiophene-3(2Н)-ones with a terminal phenanthroline group

• Vladimir P. Rybalkin,
• Sofiya Yu. Zmeeva,
• Lidiya L. Popova,
• Irina V. Dubonosova,
• Olga Yu. Karlutova,
• Oleg P. Demidov,
• Alexander D. Dubonosov and
• Vladimir A. Bren

Beilstein J. Org. Chem. 2024, 20, 552–560, doi:10.3762/bjoc.20.47

• a terminal phenanthroline receptor substituent was synthesized. Upon irradiation in acetonitrile or DMSO with light of 436 nm, they underwent Z–E isomerization of the C=C bond, followed by very fast N→O migration of the acyl group and the formation of nonemissive O-acylated isomers. These isomers

• sequential addition of Fe2+ and AcO−, we synthesized N-acylated 2-(aminomethylene)benzo[b]thiophene-3(2Н)-ones with a terminal phenanthroline substituent and studied the spectral-luminescent, photochromic and ionochromic properties. The phenanthroline moiety was incorporated into the molecule due to the

• ]thiophene-3(2Н)-ones 2a–c with a terminal phenanthroline substituent was (E)-2-(((1,10-phenanthrolin-5-yl)amino)methylene)benzo[b]thiophen-3(2H)-one (1), obtained by condensation of 3-hydroxybenzo[b]thiophene-2-carbaldehyde with 5-aminophenanthroline in acetonitrile (Scheme 1). (Z)-N-((3-Oxobenzo[b]thiophen

Synthesis and biological profile of 2,3-dihydro[1,3]thiazolo[4,5-b]pyridines, a novel class of acyl-ACP thioesterase inhibitors

• Jens Frackenpohl,
• David M. Barber,
• Guido Bojack,
• Birgit Bollenbach-Wahl,
• Ralf Braun,
• Rahel Getachew,
• Sabine Hohmann,
• Kwang-Yoon Ko,
• Karoline Kurowski,
• Bernd Laber,
• Rebecca L. Mattison,
• Thomas Müller,
• Anna M. Reingruber,
• Dirk Schmutzler and
• Andrea Svejda

Beilstein J. Org. Chem. 2024, 20, 540–551, doi:10.3762/bjoc.20.46

• (SORHA), Triticum aestivum (TRZAS), and Zea mays (ZEAMX). LpFAT A expression and purification: The fat a03 gene from Lemna paucicostata, in which the N-terminal amino acids representing the chloroplast transit peptide were replaced by an N-terminal 6xHis-tag, was cloned into a pET24 vector [3]. The LpFAT

Switchable molecular tweezers: design and applications

• Pablo Msellem,
• Maksym Dekthiarenko,
• Nihal Hadj Seyd and
• Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

(E,Z)-1,1,1,4,4,4-Hexafluorobut-2-enes: hydrofluoroolefins halogenation/dehydrohalogenation cascade to reach new fluorinated allene

• Nataliia V. Kirij,
• Andrey A. Filatov,
• Yurii L. Yagupolskii,
• Sheng Peng and
• Lee Sprague

Beilstein J. Org. Chem. 2024, 20, 452–459, doi:10.3762/bjoc.20.40

• . In contrast to bromination, the reaction with ICl is less selective and leads to the formation of addition products at both double bonds. At the same time, the reaction proceeded predominantly at the terminal double bond with the formation of a mixture of isomers (Z)-14a and (E)-14b. The content of

Mechanisms for radical reactions initiating from N-hydroxyphthalimide esters

• Carlos R. Azpilcueta-Nicolas and
• Jean-Philip Lumb

Beilstein J. Org. Chem. 2024, 20, 346–378, doi:10.3762/bjoc.20.35

• ] (Scheme 32A). Under these conditions, activation of NHPI ester 160 by SET occurs at the cathode’s surface affording the corresponding radical anion 161 (Scheme 32B). Subsequent fragmentation leads to the cyclohexyl radical (162) which then adds to the terminal carbon of radical acceptor 163, leading to

Discovery of unguisin J, a new cyclic peptide from Aspergillus heteromorphus CBS 117.55, and phylogeny-based bioinformatic analysis of UngA NRPS domains

• Sharmila Neupane,
• Marcelo Rodrigues de Amorim and
• Elizabeth Skellam

Beilstein J. Org. Chem. 2024, 20, 321–330, doi:10.3762/bjoc.20.32

• bond formation. Additional common domains include epimerization (E) domains for converting naturally occurring ʟ-amino acids to ᴅ-amino acids, methyltransferase (MT) domains that typically methylate specific N atoms, and terminal condensation (CT) domains which cyclize the growing peptide chain and

• domains forming their own branch and C domain from modules 1 and 3 clearly distinct to those from modules 2, 4, 5, and 6 (Figure 6). This separation of the non-terminal C domains could be due to modules 1 and 3 lacking an E domain. Again, the domains from UngA and UngA’’ were more closely related than

Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin

• Jon Lundstrøm,
• Emilie Gillon,
• Valérie Chazalet,
• Nicole Kerekes,
• Antonio Di Maio,
• Ten Feizi,
• Yan Liu,
• Annabelle Varrot and
• Daniel Bojar

Beilstein J. Org. Chem. 2024, 20, 306–320, doi:10.3762/bjoc.20.31

• confirmed and quantified this binding specificity in solution. Finally, we solved the high-resolution structure of the CMA1 N-terminal domain using X-ray crystallography, supporting our functional findings at the molecular level. Our study provides a comprehensive understanding of CMA1, laying the

• abovementioned applications are R-type lectins, especially those derived from plants. Examples include SNA (from Sambucus nigra, binding Neu5Acα2-6 [14]) or RCA1 (from Ricinus communis, binding terminal β-linked galactose [15]). Yet, despite the extensive studies on plant lectins, particularly R-type lectins

• aligned the individual units of the tandem repeat CBM13 domains, indicated by the N-terminal (34-158) and C-terminal units (162-286) and compared those to the domains of ricin (Figure 1b). R-type lectins have a characteristic Q-x-W structural motif close to their binding site, which is highly conserved

Nucleophilic functionalization of thianthrenium salts under basic conditions

• Xinting Fan,
• Duo Zhang,
• Xiangchuan Xiu,
• Bin Xu,
• Yu Yuan,
• Feng Chen and
• Pan Gao

Beilstein J. Org. Chem. 2024, 20, 257–263, doi:10.3762/bjoc.20.26

• generation of alkyl radicals [39]. After that, a series of methods for the modification of alkylthianthrenium salts have been developed, including the transition-metal-catalyzed cross-coupling with terminal alkynes [40], sulfonylation with DABCO·(SO2)2 [41][42][43], or alkylation of active alkenes [44][45

Substitution reactions in the acenaphthene analog of quino[7,8-h]quinoline and an unusual synthesis of the corresponding acenaphthylenes by tele-elimination

• Ekaterina V. Kolupaeva,
• Narek A. Dzhangiryan,
• Alexander F. Pozharskii,
• Oleg P. Demidov and
• Valery A. Ozeryanskii

Beilstein J. Org. Chem. 2024, 20, 243–253, doi:10.3762/bjoc.20.24

• value lies in the range of 2.51–2.61 Å, strongly resemble the bifurcated hydrogen bonds so characteristic of base 5, additionally reinforced by π-stacking between the terminal components in each H-associated triad (the shortest distance between the antiparallel π-systems of two molecular planes here is

Perspectives on push–pull chromophores derived from click-type [2 + 2] cycloaddition–retroelectrocyclization reactions of electron-rich alkynes and electron-deficient alkenes

• Michio Yamada

Beilstein J. Org. Chem. 2024, 20, 125–154, doi:10.3762/bjoc.20.13

• process. The [2 + 2] CA–RE sequence proceeds successively, as depicted in Scheme 1, where electron-donating groups are denoted as EDGs. During the [2 + 2] CA process, the nucleophilic attack by the terminal alkyne carbon of an electron-rich alkyne on an electron-deficient alkene, such as TCNE and 7,7,8,8

• TCNQ with electron-rich alkynes, the alkyne terminal carbon executes a nucleophilic attack on the exocyclic carbon of the dicyanovinyl (DCV) group of TCNQ, affording dicyanoquinodimetanes (DCNQs) [12][13]. Intense ICT bands of TCBD and DCNQ are observed at around 450–470 nm and 680–710 nm, respectively

Visible-light-induced radical cascade cyclization: a catalyst-free synthetic approach to trifluoromethylated heterocycles

• Chuan Yang,
• Wei Shi,
• Jian Tian,
• Lin Guo,
• Yating Zhao and
• Wujiong Xia

Beilstein J. Org. Chem. 2024, 20, 118–124, doi:10.3762/bjoc.20.12

• , Umemoto’s reagent undergoes a homolysis process to generate the trifluoromethyl radical species. The trifluoromethyl radical is trapped by the terminal alkene and forms a relayed radical intermediate 6, which is intercepted by the indole ring realizing an intramolecular cyclization (6-exo-trig). The newly

Multi-redox indenofluorene chromophores incorporating dithiafulvene donor and ene/enediyne acceptor units

• Christina Schøttler,
• Kasper Lund-Rasmussen,
• Line Broløs,
• Philip Vinterberg,
• Ema Bazikova,
• Viktor B. R. Pedersen and
• Mogens Brøndsted Nielsen

Beilstein J. Org. Chem. 2024, 20, 59–73, doi:10.3762/bjoc.20.8

• the terminal alkynes afforded the macrocyclic DTF-IF-RA scaffold 23. Molecular sieves (4 Å) were added to the reaction mixture as this has previously been shown to significantly promote the Glaser–Hay coupling [28]. Compounds 20 and 21 were unfortunately very sensitive compounds that were found to

1-Butyl-3-methylimidazolium tetrafluoroborate as suitable solvent for BF₃: the case of alkyne hydration. Chemistry vs electrochemistry

• Marta David,
• Elisa Galli,
• Richard C. D. Brown,
• Marta Feroci,
• Fabrizio Vetica and
• Martina Bortolami

Beilstein J. Org. Chem. 2023, 19, 1966–1981, doi:10.3762/bjoc.19.147

• possibility of obtaining the products of alkyne hydration with analogous or improved yields, using less hazardous precursors to generate the reactive species in situ. In particular, for terminal arylalkynes, the electrochemical route proved to be advantageous, yielding preferentially the hydration products vs

• well-known and useful reaction in organic chemistry, affording carbonyl compounds based on an atom-economical approach. Indeed, the addition of water to the triple bond of a terminal alkyne leads to the formation of the corresponding methyl ketone or aldehyde, in the case of Markovnikov or anti

• hexafluorophosphate (BMIm-PF6) as co-solvent with methanol and water to allow recycling of a phosphine-based Au(I) complex, as an efficient catalytic system for the hydration of terminal alkynes [87]. Moreover, the interesting properties of ILs have also been exploited to synthesize new solid polymeric catalysts for

Long oligodeoxynucleotides: chemical synthesis, isolation via catching-by-polymerization, verification via sequencing, and gene expression demonstration

• Yipeng Yin,
• Reed Arneson,
• Alexander Apostle,
• Adikari M. D. N. Eriyagama,
• Komal Chillar,
• Emma Burke,
• Martina Jahfetson,
• Yinan Yuan and
• Shiyue Fang

Beilstein J. Org. Chem. 2023, 19, 1957–1965, doi:10.3762/bjoc.19.146

• automated de novo synthesis of long ODNs would solve or alleviate many of these problems. Significant efforts have been made toward de novo synthesis of long ODNs through engineering of template-independent terminal deoxynucleotidyl transferase (TdT) [17]. While promising, this enzymatic method is unlikely

Aldiminium and 1,2,3-triazolium dithiocarboxylate zwitterions derived from cyclic (alkyl)(amino) and mesoionic carbenes

• Nedra Touj,
• François Mazars,
• Guillermo Zaragoza and
• Lionel Delaude

Beilstein J. Org. Chem. 2023, 19, 1947–1956, doi:10.3762/bjoc.19.145

• -disubstituted-1,2,3-triazole derivatives is readily achieved via the copper(I)-catalyzed [3 + 2] cycloaddition of an azide and a terminal alkyne (CuAAC) [63][64][65]. A further alkylation of the N3 position with an alkyl halide is an equally straightforward procedure that ultimately affords a large assortment

Charge carrier transport in perylene-based and pyrene-based columnar liquid crystals

• Alessandro L. Alves,
• Simone V. Bernardino,
• Carlos H. Stadtlober,
• Edivandro Girotto,
• Giliandro Farias,
• Rodney M. do Nascimento,
• Sergio F. Curcio,
• Thiago Cazati,
• Marta E. R. Dotto,
• Juliana Eccher,
• Leonardo N. Furini,
• Hugo Gallardo,
• Harald Bock and
• Ivan H. Bechtold

Beilstein J. Org. Chem. 2023, 19, 1755–1765, doi:10.3762/bjoc.19.128

• . In 1-iso, only the two hexagonal imide groups affect the HOMO/LUMO localization, whereas the pentagonal central imide group is little affected. In 2-iso, both pentagonal are relevant to the HOMO/LUMO localization, whereas the two terminal benzene rings are little affected. The cartesian coordinates

Quinoxaline derivatives as attractive electron-transporting materials

• Zeeshan Abid,
• Liaqat Ali,
• Sughra Gulzar,
• Faiza Wahad,
• Raja Shahid Ashraf and
• Christian B. Nielsen

Beilstein J. Org. Chem. 2023, 19, 1694–1712, doi:10.3762/bjoc.19.124

• -withdrawing terminal acceptor units, and careful selection of solvents and annealing processes have also been demonstrated as potential solutions to improve charge transport and refine the device fabrication processes. You et al. found that the position of alkoxy side chains on the pendant benzene rings

• molecule series, Qx16, featured a 1,4-dihydro-2,3-quinoxalinedione core and different terminal acceptor units. The modified NFAs demonstrated visible and near-infrared absorption as well as good electron mobility, suggesting their potential for experimental exploration in (OCSs) [31]. While FREAs are

• compounds exhibited good coplanarity through intramolecular interactions, narrow bandgaps, broad absorption in the NIR region and PCEs above 10% [32]. Ayub et al. decorated the central donor–acceptor–donor unit of Qx17 and Qx18 with five new terminal end groups, resulting in the Qx19 series, and predicted

A deep-red fluorophore based on naphthothiadiazole as emitter with hybridized local and charge transfer and ambipolar transporting properties for electroluminescent devices

• Suangsiri Arunlimsawat,
• Patteera Funchien,
• Pongsakorn Chasing,
• Atthapon Saenubol,
• Taweesak Sudyoadsuk and
• Vinich Promarak

Beilstein J. Org. Chem. 2023, 19, 1664–1676, doi:10.3762/bjoc.19.122

• configuration with dihedral angles of 54–56° between the planes of the terminal carbazole donors and the Nz acceptor that are beneficial for the state mixing between the LE and CT states. The lowest unoccupied molecular orbital (LUMO) was mainly localized on the Nz ring, while the highest occupied molecular

Radical chemistry in polymer science: an overview and recent advances

• Zixiao Wang,
• Feichen Cui,
• Yang Sui and
• Jiajun Yan

Beilstein J. Org. Chem. 2023, 19, 1580–1603, doi:10.3762/bjoc.19.116

• ATRP relies on the establishment of a reversible activation/deactivation equilibrium reaction between an alkyl halide or halide-like initiator (RX) and a radical species (R·) [43]. During the activation process, the organohalides quickly lose their terminal halogen atoms in the presence of the liganded

Lewis acid-promoted direct synthesis of isoxazole derivatives

• Dengxu Qiu,
• Chenhui Jiang,
• Pan Gao and
• Yu Yuan

Beilstein J. Org. Chem. 2023, 19, 1562–1567, doi:10.3762/bjoc.19.113

• , which is an internal alkyne instead of a terminal alkyne, but no desired product was obtained. Next, we explored the substrate scope of 2-methylquinolines under the standard conditions. 2-Methylquinoline bearing different substituents at various positions gave the corresponding products with moderate to

Morpholine-mediated defluorinative cycloaddition of gem-difluoroalkenes and organic azides

• Tzu-Yu Huang,
• Mario Djugovski,
• Sweta Adhikari,
• Destinee L. Manning and
• Sudeshna Roy

Beilstein J. Org. Chem. 2023, 19, 1545–1554, doi:10.3762/bjoc.19.111

• , organic azides, and morpholine. Terminal gem-difluoroalkenes exhibit unique reactivity toward nucleophiles. The two σ-withdrawing fluorine atoms at the α-position and the strong polar nature of the double bond make gem-difluoroalkenes susceptible to a nucleophilic attack that is followed by a β-fluoride

Functions of enzyme domains in 2-methylisoborneol biosynthesis and enzymatic synthesis of non-natural analogs

• Binbin Gu,
• Lin-Fu Liang and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2023, 19, 1452–1459, doi:10.3762/bjoc.19.104

• studied. Several 2-methylisoborneol synthases have a proline-rich N-terminal domain of unknown function. The results presented here demonstrate that this domain leads to a reduced enzyme activity, in addition to its ability to increase long-term solubility of the protein. Furthermore, the substrate scope

• by two sequential cyclisation reactions to A and B, and terminal quenching with water. This hypothesis was confirmed by the discovery of the biosynthetic genes coding for a GPP methyltransferase (GPPMT) and a type I terpene synthase termed 2-methylisoborneol synthase (2MIBS) [23][24]. Interestingly

• versions of 2MIBSs exhibit a proline-rich N-terminal domain of unknown function that appears disordered in the crystal structure [28]. As a first aspect of this study, we have investigated the possible function of this N-terminal domain. 2MIBS is known to form several methylated monoterpenes as side