A chromatography-free and aqueous waste-free process for thioamide preparation with Lawesson’s reagent

• Ke Wu,
• Yichen Ling,
• An Ding,
• Liqun Jin,
• Nan Sun,
• Baoxiang Hu,
• Zhenlu Shen and
• Xinquan Hu

Beilstein J. Org. Chem. 2021, 17, 805–812, doi:10.3762/bjoc.17.69

• potential large-scale preparations. Thioamides are highly attractive molecules in pharmaceuticals, agrochemicals, electronic chemicals, and materials sciences [17][18][19][20][21][22][23][24][25][26][27]. In coordination chemistry, pincer-type ligands containing a thioamide motif were shown to exhibit

• simplify the work-up of the reaction with LR, this newly developed method was extended to synthesize two pincer ligands, N2,N6-di(n-butyl)pyridine-2,6-bis(carbothioamide) (4, Scheme 1) and N2,N6-bis(2,4,6-trimethylphenyl)pyridine-2,6-bis(carbothioamide) (6, Scheme 2) [34][35][43][44]. With a slight excess

Chiral isothiourea-catalyzed kinetic resolution of 4-hydroxy[2.2]paracyclophane

• David Weinzierl and
• Mario Waser

Beilstein J. Org. Chem. 2021, 17, 800–804, doi:10.3762/bjoc.17.68

• utilized as building blocks for more demanding ligands and catalysts became a task of high importance. Thus, several strategies to access enantioenriched [2.2]paracyclophanes have been reported, either relying on classical resolution approaches or, more recently, making use of asymmetric catalysis to carry

• decades, it was shown that enantioenriched 2 may serve as a valuable building block to access more advanced chiral cyclophane ligands and catalysts [3][4][19][20][21][22] and therefore its asymmetric synthesis became an important task [3][4][18][19][20][21][22][23][24][25][26][27]. Several strategies to

Synthesis of β-triazolylenones via metal-free desulfonylative alkylation of N-tosyl-1,2,3-triazoles

• Soumyaranjan Pati,
• Renata G. Almeida,
• Eufrânio N. da Silva Júnior and
• Irishi N. N. Namboothiri

Beilstein J. Org. Chem. 2021, 17, 762–770, doi:10.3762/bjoc.17.66

• , these diazo compounds undergo [3 + 2] cycloadditions with suitable substrates to render various nitrogen-rich heterocycles [39]. In addition to their synthetic importance, these are frequently encountered as ligands in many metal complexes [40][41][42][43]. Our group have also employed 1,3-dicarbonyl

Effective microwave-assisted approach to 1,2,3-triazolobenzodiazepinones via tandem Ugi reaction/catalyst-free intramolecular azide–alkyne cycloaddition

• Maryna O. Mazur,
• Oleksii S. Zhelavskyi,
• Eugene M. Zviagin,
• Svitlana V. Shishkina,
• Vladimir I. Musatov,
• Maksim A. Kolosov,
• Elena H. Shvets,
• Anna Yu. Andryushchenko and
• Valentyn A. Chebanov

Beilstein J. Org. Chem. 2021, 17, 678–687, doi:10.3762/bjoc.17.57

• of 1,2,4-triazolobenzodiazepines is the treatment of central nervous system (CNS) disorders. Such drugs as alprazolam and estazolam are used as anxiolytic agents, whereas adinazolam is known as an antidepressant [3]. Benzodiazepine molecules are ligands for GABA-receptors and act as positive

[2 + 1] Cycloaddition reactions of fullerene C₆₀ based on diazo compounds

• Yuliya N. Biglova

Beilstein J. Org. Chem. 2021, 17, 630–670, doi:10.3762/bjoc.17.55

• pincer ligands 57, 58 [102], 59 [103], and 60 [104], or the so-called “bucky ligands” (Scheme 18). In the development of new organometallic C60 compounds that can be used as homogeneous catalysts, new blocks 61 and 62, cross-conjugated through cyclopropane, were synthesized (Scheme 19) [104]. Attaching

• such an electron-enriched metal-containing system to C60 can result in push–pull blocks with new electronic and photochemical properties, as demonstrated by complexes 63, 64 [103], and 65 [104] in Figure 6. The syntheses of new types of N-containing fullerene ligands for metal complexes 66–68 are

• nitrophenylfullerenes 48 and 50. Synthesis of conjugate 52 of C60 with ethyl diazo(4-nitrophenyl)acetate. Synthesis of fluoride-containing phenylmethanofullerenes 53–56. Synthesis of “bucky ligands” 57–60. The synthetic route to methanofullerene-based palladium–bisaminoaryl complex 62. Synthesis of N-containing

Valorisation of plastic waste via metal-catalysed depolymerisation

• Francesca Liguori,
• Carmen Moreno-Marrodán and
• Pierluigi Barbaro

Beilstein J. Org. Chem. 2021, 17, 589–621, doi:10.3762/bjoc.17.53

• temperature (35 °C) but toxic CH2Cl2 solvent (Scheme 1). The reaction using second-generation N-heterocyclic carbene ligands was faster and preferably yielded cyclododecatriene. Larger cyclic butadienes may be used in the production of flame retardants, lubricants and specialty polymers [149][150]. 3.1.3

• the glycolytic depolymerisation of PET [128][205]. The highest BHET yield (74.7%) was achieved using zinc chloride (0.5% w/w), an EG/PET ratio of 14:1 and reflux conditions (Table 2, entry 8). The use of preformed soluble Co(II) complexes bearing bidentate phosphorus ligands (e.g., 1,2-bis

• complexes could be used as catalysts, both in PLA alcoholysis and in PLA synthesis via lactide polymerisation. Metal species other than zinc were reported as effective catalysts for PLA methanolysis. Group 4 metal complexes with salalen ligands of the formula M(ligand)(OiPr)2 (M = Ti, Zr, Hf) were used in

Amino- and polyaminophthalazin-1(2H)-ones: synthesis, coordination properties, and biological activity

• Zbigniew Malinowski,
• Emilia Fornal,
• Agata Sumara,
• Renata Kontek,
• Karol Bukowski,
• Beata Pasternak,
• Dariusz Sroczyński,
• Joachim Kusz,
• Magdalena Małecka and
• Monika Nowak

Beilstein J. Org. Chem. 2021, 17, 558–568, doi:10.3762/bjoc.17.50

• anticancer drug vatalanib [26][27][28] (Figure 1). On the other hand, aminophthalazinones can be prospective candidates as N- and O-donor ligands to form complexes with biological significant metal ions, such as copper or zinc [29]. Recently, we have demonstrated a strategy for the synthesis of phthalazinone

• need to develop new and improve the existing methods for the synthesis of aminophthalazinones is important from the point of view of their properties and pharmaceutical industry interest. In the present work, we report results of our research on the synthesis, application as ligands in complexes, and

• behavior of aminophthalazinones with Cu(II) ions To conclude the synthetic research, we looked at the potential of aminophthalazinones as polydentate ligands for the synthesis of complexes with metal ions. Examples of the use of phthalazinone and its derivatives in the synthesis of coordination compounds

Synthesis and physicochemical evaluation of fluorinated lipopeptide precursors of ligands for microbubble targeting

• Masayori Hagimori,
• Estefanía E. Mendoza-Ortega and
• Marie Pierre Krafft

Beilstein J. Org. Chem. 2021, 17, 511–518, doi:10.3762/bjoc.17.45

• , which involves the use of targeting ligands, such as monoclonal antibodies, antibody fragments, proteins, peptides, and other small molecules, including vitamins and carbohydrates [7][8]. The targeting ligands are coupled to the surface of the carrier to selectively target tumor cells that overexpress a

• particular cell surface receptor [7][9][10][11][12][13][14]. To this aim, ligand–lipid conjugates have been developed in research and preclinical development for liposome targeting for decades. In particular, peptide ligands offer significant advantages, including efficient synthesis routes, versatility, and

• blood circulation times by allowing them to evade immune detection. PEGs often play a key role in the design of the ligands as a spacer between the nanocarrier surface and the lipid. PEGs have, however, some shortcomings, such as a broad molecular weight distribution, large steric hindrance, and the

¹⁹F NMR as a tool in chemical biology

• Diana Gimenez,
• Aoife Phelan,
• Cormac D. Murphy and
• Steven L. Cobb

Beilstein J. Org. Chem. 2021, 17, 293–318, doi:10.3762/bjoc.17.28

• dissociation binding constant of ligands (Kd) determined from the changes in the chemical shift of the labelled nuclei within the protein. Intuitively, the largest chemical shift perturbations are expected to be seen for residues in the closest proximity to the bound ligand. An additional advantage of this

• ) and 19F nuclei in native tryptophan, and 5-FTrp-labelled bromodomain protein Brd4 against a panel of ligands (Figure 4) [34]. 1H NMR was found to be 6–20 times less responsive than fluorine with regards to chemical shift perturbations. Indeed, the high resolution observed in the fluorine spectra

• -β2AR, changes in the NMR signals monitored within different helices of the protein revealed that agonist binding primarily shifted the equilibrium towards the G protein-specific active state of helix VI. In contrast, β-arrestin-biased ligands predominantly affected the conformation of specifically

Annulation of a 1,3-dithiole ring to a sterically hindered o-quinone core. Novel ditopic redox-active ligands

• Sergey V. Norkov,
• Anton V. Cherkasov,
• Andrey S. Shavyrin,
• Maxim V. Arsenyev,
• Viacheslav A. Kuropatov and
• Vladimir K. Cherkasov

Beilstein J. Org. Chem. 2021, 17, 273–282, doi:10.3762/bjoc.17.26

• . o-Dioxolene redox-active species bearing additional functions are regarded as promising ligands for the synthesis of metallocomplexes exhibiting unusual magnetic, photovoltaic or luminescent properties. Thus, previously reported binuclear rare-earth metal complexes with redox-active triads such as o

• dithiocarboxylates [20][21][22][23]. There are some reports in the literature regarding their application as ligands for the preparation of complexes exhibiting non-linear optical activity as well as possessing extraordinary magnetic properties [24]. The simplest structures that were classified both as gem

• ring seems promising since β-diketones as well as o-quinones are known as chelating ligands. The combination of two different chelating sites in the same molecule should give a bifunctional bridging ligand. Such species are interesting from the viewpoint of assembling of ordered structures in a crystal

The preparation and properties of 1,1-difluorocyclopropane derivatives

• Kymbat S. Adekenova,
• Peter B. Wyatt and
• Sergazy M. Adekenov

Beilstein J. Org. Chem. 2021, 17, 245–272, doi:10.3762/bjoc.17.25

• enantioselective hydrocupration of difluorocyclopropenes in the presence of chiral diphosphine ligands using stoichiometric hydride sources that included polymethylhydrosiloxane (PMHS) and organoboranes (Scheme 35) [79]. Cossy and co-workers have achieved the catalytic asymmetric transfer hydrogenation with

Au(III) complexes with tetradentate-cyclam-based ligands

• Ann Christin Reiersølmoen,
• Thomas N. Solvi and
• Anne Fiksdahl

Beilstein J. Org. Chem. 2021, 17, 186–192, doi:10.3762/bjoc.17.18

• ]. In contrast, gold(III) catalysis was for a long time mostly based on inorganic salts, such as AuCl3, AuBr3, or pyridine–AuCl3 and Pic–AuCl2. However, Au(III) complexes with various coordinated ligands are about to become more explored. Different from the linear coordination mode of gold(I), gold(III

• ) forms square planar complexes. This allows for greater steric control around the reaction center by using polydentate ligands. An interesting group of ligands which may coordinate to all the four coordination sites of gold(III), are represented by polyamine ligands, such as cyclam (1,4,8,11

• the Au(III) complex upon substitution of all coordinating halides by nitrogen donors. We hereby present the synthesis of chiral cyclam ligands and related polyamino compounds, along with Au(III) coordination studies and evaluation of the catalytic ability of the successfully obtained Au(III) complexes

Insight into functionalized-macrocycles-guided supramolecular photocatalysis

• Minzan Zuo,
• Krishnasamy Velmurugan,
• Kaiya Wang,
• Xueqi Tian and
• Xiao-Yu Hu

Beilstein J. Org. Chem. 2021, 17, 139–155, doi:10.3762/bjoc.17.15

• stereochemistry as catalysts [27]. The stereochemical properties were sensitive to the linker size and length, and the yield of the syn-head-to-tail-9,10:9',10'-cyclodimer could reach 97–98%. Traditional thiol-functionalized organic ligands decorated on the surface of gold nanoclusters (AuNCs) tend to generate a

• , saturated), which might be due to the selective host–guest interactions between β-CD and the reactants. In addition, the captured reactants were in close proximity to the CdS nanocrystal surface. Consequently, the barrier of the surface ligands on the photocarrier transport could be reduced. Recently, Kato

Supramolecular polymerization of sulfated dendritic peptide amphiphiles into multivalent L-selectin binders

• David Straßburger,
• Svenja Herziger,
• Katharina Huth,
• Moritz Urschbach,
• Rainer Haag and
• Pol Besenius

Beilstein J. Org. Chem. 2021, 17, 97–104, doi:10.3762/bjoc.17.10

• of rigid supramolecular polymers. Since multivalent sulfated supramolecular structures mimic naturally occurring L-selectin ligands, the corresponding affinity was evaluated using a competitive SPR binding assay and benchmarked to an ethylene glycol-decorated supramolecular polymer. Keywords: L

• ] promotes the binding of ligands exhibiting a high local negative charge density, such as sulfotyrosinated P-selectin glycoprotein ligand-1 (PSGL-1) [23] or heparin [24]. A versatile synthetic ligand that takes advantage of binding to cationic target sites, is dendritic polyglycerol sulfate [25] (dPGS), due

• sulfated tyrosine and sialyl-LewisX as model ligands. The resulting signal is referenced to a control experiment lacking the preincubation of L-selectin particles. Figure 3 summarizes the resulting dose–response curves. The sulfated supramolecular assemblies resulting from II bound with an IC50 value of

Metal-free synthesis of biarenes via photoextrusion in di(tri)aryl phosphates

• Hisham Qrareya,
• Lorenzo Meazza,
• Stefano Protti and
• Maurizio Fagnoni

Beilstein J. Org. Chem. 2020, 16, 3008–3014, doi:10.3762/bjoc.16.250

• active compound is a common practice in medicinal chemistry [1][2][3]. In particular, the biaryl moiety is a privileged scaffold largely present in the skeleton of natural substances [4][5][6][7] and in useful chiral ligands [8][9][10]. The synthesis of biaryl derivatives remains, however, a considerable

UV resonance Raman spectroscopy of the supramolecular ligand guanidiniocarbonyl indole (GCI) with 244 nm laser excitation

• Tim Holtum,
• Vikas Kumar,
• Daniel Sebena,
• Jens Voskuhl and
• Sebastian Schlücker

Beilstein J. Org. Chem. 2020, 16, 2911–2919, doi:10.3762/bjoc.16.240

• , Universitätsstrasse 7, 45141 Essen, Germany 10.3762/bjoc.16.240 Abstract Ultraviolet resonance Raman (UVRR) spectroscopy is a powerful vibrational spectroscopic technique for the label-free monitoring of molecular recognition of peptides or proteins with supramolecular ligands such as guanidiniocarbonyl pyrroles

• (GCPs). The use of UV laser excitation enables Raman binding studies of this class of supramolecular ligands at submillimolar concentrations in aqueous solution and provides a selective signal enhancement of the carboxylate binding site (CBS). A current limitation for the extension of this promising

• the results from density functional theory (DFT) calculations. Keywords: GCI; GCP; guanidiniocarbonyl indole; guanidiniocarbonyl pyrrole; UVRR; Raman spectroscopy; resonance Raman; Introduction Supramolecular ligands are capable to selectively bind to peptides and proteins via reversible non

Synthesis of imidazo[1,5-a]pyridines via cyclocondensation of 2-(aminomethyl)pyridines with electrophilically activated nitroalkanes

• Dmitrii A. Aksenov,
• Nikolai A. Arutiunov,
• Vladimir V. Maliuga,
• Alexander V. Aksenov and
• Michael Rubin

Beilstein J. Org. Chem. 2020, 16, 2903–2910, doi:10.3762/bjoc.16.239

• synthesis inhibitor (Figure 1) [10][11][12]. In addition, compounds with this structure were investigated as photoluminescent sensors [13] and have been employed to generate pincer and heterocyclic carbene ligands for transition metal catalysis [14][15]. A lot of efforts have been dedicated to the

Incorporation of a metal-mediated base pair into an ATP aptamer – using silver(I) ions to modulate aptamer function

• Marius H. Heddinga and
• Jens Müller

Beilstein J. Org. Chem. 2020, 16, 2870–2879, doi:10.3762/bjoc.16.236

• aptamer that adopts a guanine quadruplex structure was modified by four pyridine ligands [22]. The addition of Cu(II) or Ni(II) ions leads to the formation of a square-planar complex that reduces the affinity of the modified aptamer to its target protein. To the best of our knowledge, there is no

Using multiple self-sorting for switching functions in discrete multicomponent systems

• Amit Ghosh and
• Michael Schmittel

Beilstein J. Org. Chem. 2020, 16, 2831–2853, doi:10.3762/bjoc.16.233

• ]. Over the years, a variety of chemical stimuli (pH [34], metal ions [35][36][37], ligands [38], solvents [39][40][41], and reagents [42]) have been successfully utilized in dual-state transformations. Multistate transformations with more than two well-defined states [43] should be beneficial for

• chemical stimuli yielding different supramolecular products. The porphyrin ligands of the cage [Zn4(8')6]8+ interacted favorably with C70 as a guest, whereas an electron-rich aromatic crown-ether did thread onto the electron-deficient naphthalene diimides of cage [Zn4(7')6]8+ forming mechanically

• BPh4− at the cage [Co6(10')4]12+ (SelfSORT-I). Double self-sorting (only structural) Hahn et al. demonstrated for the first time that poly-NHC ligands furnish metallosupramolecular assemblies through narcissistic self-sorting [53]. The one-pot reaction of the tris-NHC ligands 13–15 with different

Synthesis and investigation of quadruplex-DNA-binding, 9-O-substituted berberine derivatives

• Jonas Becher,
• Daria V. Berdnikova,
• Heiko Ihmels and
• Christopher Stremmel

Beilstein J. Org. Chem. 2020, 16, 2795–2806, doi:10.3762/bjoc.16.230

• derivatives. Notably, a clear relationship between the binding affinity of the ligands with the length of the alkyl linker chain, n, was not observed. However, depending on the structure, the ligands exhibited different effects when bound to the G4-DNA, such as fluorescent light-up effects and formation of

• not provide evidence for a significant effect of the adenine unit on the binding affinity of the ligands, for example, by additional association with the loops, presumably because the adenine residue is sterically shielded by the neighboring triazole unit. Keywords: berberine alkaloids; DNA ligands

• , G4-DNA-targeting ligands are searched for that bind selectively and sufficiently strong to quadruplex DNA and thereby influence the biological function of G-rich DNA sequences [17][18][19][20][21][22]. Among the numerous classes of compounds, mostly related to traditional DNA binders, that have been

A heterobimetallic tetrahedron from a linear platinum(II)-bis(acetylide) metalloligand

• Matthias Hardy,
• Marianne Engeser and
• Arne Lützen

Beilstein J. Org. Chem. 2020, 16, 2701–2708, doi:10.3762/bjoc.16.220

• complexes; pyridylimine ligands; self-assembly; supramolecular chemistry; Introduction The understanding of the general design principles for the self-assembly of metallosupramolecular aggregates [1][2][3][4][5] allowed to access more and more complex and large assemblies over the past decades like

• sophisticated cage-in-ring structures [6][7], interlocked rings [8] and catenanes [9][10][11][12] or giant spheres [13][14]. Increasing the structural complexity, however, usually implies growing synthetic efforts that have to be made to obtain the necessary organic ligands [15][16][17]. A great way to simplify

• be assembled from linear divalent or planar trivalent ligands with octahedrally coordinating metal cations, the search for subtle building blocks is obviously more difficult, if the organoligand should be replaced by a metalloligand with a similar geometry. Numerous examples in the literature prove

Optical detection of di- and triphosphate anions with mixed monolayer-protected gold nanoparticles containing zinc(II)–dipicolylamine complexes

• Lena Reinke,
• Julia Bartl,
• Marcus Koch and
• Stefan Kubik

Beilstein J. Org. Chem. 2020, 16, 2687–2700, doi:10.3762/bjoc.16.219

• /bjoc.16.219 Abstract Gold nanoparticles covered with a mixture of ligands of which one type contains solubilizing triethylene glycol residues and the other peripheral zinc(II)–dipicolylamine (DPA) complexes allowed the optical detection of hydrogenphosphate, diphosphate, and triphosphate anions in

• depended on the nature of the anion, with diphosphate and triphosphate inducing visual changes at significantly lower concentrations than hydrogenphosphate. In addition, the sensing sensitivity was also affected by the ratio of the ligands on the nanoparticle surface, decreasing as the number of

• development of optical probes [1][2][3][4][5][6]. They are accessible in different sizes and shapes, can be stabilized by immobilizing suitable ligands, and can easily be functionalized with ligands containing binding sites that mediate the interaction with the analyte. Different strategies allow analyte

A consensus-based and readable extension of Linear Code for Reaction Rules (LiCoRR)

• Benjamin P. Kellman,
• Yujie Zhang,
• Emma Logomasini,
• Eric Meinhardt,
• Karla P. Godinez-Macias,
• Austin W. T. Chiang,
• James T. Sorrentino,
• Chenguang Liang,
• Bokan Bao,
• Yusen Zhou,
• Sachiko Akase,
• Isami Sogabe,
• Thukaa Kouka,
• Elizabeth A. Winzeler,
• Iain B. H. Wilson,
• Matthew P. Campbell,
• Sriram Neelamegham,
• Frederick J. Krambeck,
• Kiyoko F. Aoki-Kinoshita and
• Nathan E. Lewis

Beilstein J. Org. Chem. 2020, 16, 2645–2662, doi:10.3762/bjoc.16.215

• one point. Glycans are themselves ligands, as they are pieces of larger molecules. A substring is a valid “ligand” if each parenthesis in that substring is uniquely and appropriately matched; each left parenthesis must be followed by a corresponding right parenthesis and each right parenthesis must be

• , XX(XX, X)(XX are not valid ligands, while XX(XXX)XX is valid. Functionally, ligands can serve as connectors between the left and right portions of a glycan a user would like to specify. A ligand is simply a chain of monosaccharides which may contain nested branches; the nested branches must also be

• ligands. However, there can be many chains or paths through a ligand, starting from one of the terminal monosaccharides and culminating at the root end; there are many ligands within most ligands. Any of these ligands can serve as a connector from the root (reducing) end of one ligand to a terminal (non

Synthesis of 4-substituted azopyridine-functionalized Ni(II)-porphyrins as molecular spin switches

• Jannis Ludwig,
• Tobias Moje,
• Fynn Röhricht and
• Rainer Herges

Beilstein J. Org. Chem. 2020, 16, 2589–2597, doi:10.3762/bjoc.16.210

• azopyridines as covalently attached photoswitchable ligands. The molecules are designed in such a way that the azopyridines coordinate to the Ni ion if the azo unit is in cis configuration. For steric reasons no intramolecular coordination is possible if the azopyridine unit adopts the trans configuration

• state. 4-Substituted pyridines exhibit a distinguished correlation between basicity and coordination strength as axial ligands with Ni-porphyrins [12]. Hence, Hammet σ values might be used to predict and to systematically optimize the performance of the spin switch. In previous studies we have shown

• diamagnetic (or the paramagnetic) species in the two photostationary states. The intermolecular association constants of pyridines as axial ligands to Ni-porphyrins as a function of their para substituents usually follow the Hammett relationship [5][12]. Hence, the association constants should also be

Thermodynamic and electrochemical study of tailor-made crown ethers for redox-switchable (pseudo)rotaxanes

• Henrik Hupatz,
• Marius Gaedke,
• Hendrik V. Schröder,
• Julia Beerhues,
• Arto Valkonen,
• Fabian Klautzsch,
• Sebastian Müller,
• Felix Witte,
• Kari Rissanen,
• Biprajit Sarkar and
• Christoph A. Schalley

Beilstein J. Org. Chem. 2020, 16, 2576–2588, doi:10.3762/bjoc.16.209

• ; redox chemistry; rotaxanes; supramolecular chemistry; Introduction Pedersen discovered crown ethers in 1967 while searching for multidentate ligands for the vanadyl group [1][2][3]. He was later awarded the Nobel Prize in Chemistry for his studies on the crown ether selective binding properties towards