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Search for "protecting group" in Full Text gives 407 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Site-selective reactions mediated by molecular containers

  • Rui Wang and
  • Yang Yu

Beilstein J. Org. Chem. 2022, 18, 309–324, doi:10.3762/bjoc.18.35

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  • could be regarded as a protective group by shielding the internal alkenyl site. In 2016, the Rebek group achieved the site-selective reduction of an α,ω-diazide compound by trimethylphosphine (PMe3) in aqueous solution with a cavitand host as the protecting group for one of the azide sites (Figure 5
  • , and factors like steric and electronic effects of the nucleophile and substrate and the polarity of the solvent would influence the product ratio [75]. Here, as illustrated above, the authors introduced the cage host J as the noncovalent protecting group of the internal reactive sites, which directed
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Published 14 Mar 2022

Unexpected chiral vicinal tetrasubstituted diamines via borylcopper-mediated homocoupling of isatin imines

  • Marco Manenti,
  • Leonardo Lo Presti,
  • Giorgio Molteni and
  • Alessandra Silvani

Beilstein J. Org. Chem. 2022, 18, 303–308, doi:10.3762/bjoc.18.34

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  • conformer. Aiming to generalize the discovered transformation, a brief scope of the reaction with respect to the N-tert-butanesulfinyl imine substrate was next performed (Figure 2). The protecting group R1 on the oxindole nitrogen atom was found to have a moderate effect on the reactivity, with R1 = Bn
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Letter
Published 10 Mar 2022

Regioselectivity of the SEAr-based cyclizations and SEAr-terminated annulations of 3,5-unsubstituted, 4-substituted indoles

  • Jonali Das and
  • Sajal Kumar Das

Beilstein J. Org. Chem. 2022, 18, 293–302, doi:10.3762/bjoc.18.33

Graphical Abstract
  • cyclization is observed. Moreover, the use of the electron-withdrawing protecting group on the indole N atom could favor the formation of 4,5-fused indoles by decreasing the nucleophilicity at the indole C3 position. However, detailed studies of the effect of the electronic nature of the indole NH protecting
  • group on the regioselectivity are yet to be reported for SEAr-based intramolecular cyclization and annulation reactions of 3,5-unsubstituted, 4-substituted indoles. Such studies in this area will certainly aid in elucidating the regioselectivity more precisely. SEAr-based, CAr–C bond-forming cyclization
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Published 08 Mar 2022

Synthesis and late stage modifications of Cyl derivatives

  • Phil Servatius and
  • Uli Kazmaier

Beilstein J. Org. Chem. 2022, 18, 174–181, doi:10.3762/bjoc.18.19

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  • suitable protected linear precursor A (Scheme 2, PG: protecting group), the resulting carboxylic acid obtained can directly be activated and subjected to cyclization. If the glycine allyl ester is incorporated as the last building block into the C-terminus of the peptide, this concept should provide a high
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Published 04 Feb 2022

Asymmetric organocatalytic Michael addition of cyclopentane-1,2-dione to alkylidene oxindole

  • Estelle Silm,
  • Ivar Järving and
  • Tõnis Kanger

Beilstein J. Org. Chem. 2022, 18, 167–173, doi:10.3762/bjoc.18.18

Graphical Abstract
  • because of the longer time needed. Next, we screened different protecting groups for the oxindole. Previously, Boc-protected oxindole 2a gave us the product in 75% yield, in dr 2.6:1 and in ee 90%/94% (Scheme 1, 3a). With a Cbz-protecting group the enantioselectivity decreased to 82%/88% (Scheme 1, 3b
  • ). The use of a sterically more demanding Fmoc-protecting group decreased the ee values even more for the minor diastereoisomer (Scheme 1, 3c). Surprisingly, with benzyl-protected oxindole, the reaction did not proceed (Scheme 1, 3d), which implies that the carbonyl group of the carbamate moiety in the N
  • -protecting group and electron-withdrawing properties of the protection groups are essential for coordination with the catalyst and for the reactivity of the Michael acceptor. Using a tosyl-protected oxindole the reaction was sluggish, the yield was low and the enantioselectivity could not be determined
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Published 03 Feb 2022

Synthesis and bioactivity of pyrrole-conjugated phosphopeptides

  • Qiuxin Zhang,
  • Weiyi Tan and
  • Bing Xu

Beilstein J. Org. Chem. 2022, 18, 159–166, doi:10.3762/bjoc.18.17

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  • in the backbone of 2a leads to 7, which bears an additional positive charge compared to 2a. A ᴅ-tetraleucine (l4) replaces ᴅ-diphenylalanine (ff) in 2d and 2e to form 8a and 8b, respectively. Adding a Boc protecting group at the N-terminus of 2a produces 9. Attaching a guanidinoacetic acid motif to
  • , we introduced the N-methylpyrrole (Py) units into the peptides obtained via solution-phase amide bond formation to produce 2a–h, 3a,b, 4a,b, 5a,b, 6a–c, 7, 8a,b, 11a,b, 12a–c, 13, 14, and 15a–c. We conjugated two Py units successively to the peptide ffpy and kept the Boc protecting group of the
  • cytotoxicity, respectively. Capping the N-terminus with a Boc-protecting group (9) or a guanidinoacetic acid motif (10a and 10b) renders the molecules with higher cytotoxicity (resulting in cell viabilities of about 70%) than those of 2f and 2g. Compounds without phosphorylation (11a, 11b and 12a–c) show
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Published 31 Jan 2022

Ready access to 7,8-dihydroindolo[2,3-d][1]benzazepine-6(5H)-one scaffold and analogues via early-stage Fischer ring-closure reaction

  • Irina Kuznetcova,
  • Felix Bacher,
  • Daniel Vegh,
  • Hsiang-Yu Chuang and
  • Vladimir B. Arion

Beilstein J. Org. Chem. 2022, 18, 143–151, doi:10.3762/bjoc.18.15

Graphical Abstract
  • groups in one step produced 16 in 86% yield. However, attempts to perform the ring-closure reaction of the Boc-protected amide 16 by an intramolecular Heck reaction failed and led to degradation of the starting material. Most likely, the electron-withdrawing tert-butyloxycarbonyl protecting group
  • hampered this transformation [24]. Therefore, the same synthetic way was repeated with ethoxymethyl ether as the protecting group to give 17. The ESI mass spectrum provided evidence that cyclization occurred with formation of 18. However, protection with chloromethyl ethyl ether was achieved only in 18
  • % yield. This is most likely due to the strongly basic conditions (NaH) needed for the attachment of the ethoxymethyl protecting group, which might lead to deprotonation at the CH2 group (C7) followed by the formation of undesired side products. Being disappointed by the inefficiency of this route with at
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Published 26 Jan 2022

Chemical and chemoenzymatic routes to bridged homoarabinofuranosylpyrimidines: Bicyclic AZT analogues

  • Sandeep Kumar,
  • Jyotirmoy Maity,
  • Banty Kumar,
  • Sumit Kumar and
  • Ashok K. Prasad

Beilstein J. Org. Chem. 2022, 18, 95–101, doi:10.3762/bjoc.18.10

Graphical Abstract
  • unusual removal of TBDPS was observed when nucleosides 22a,b were treated with 2 M NaOH in dioxane and water (1:1). A literature search showed that the TBDPS protecting group could be removed under basic conditions [35][36]. However, removal of the TBDPS group from the primary hydroxy group of a
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Published 11 Jan 2022

Peptide stapling by late-stage Suzuki–Miyaura cross-coupling

  • Hendrik Gruß,
  • Rebecca C. Feiner,
  • Ridhiwan Mseya,
  • David C. Schröder,
  • Michał Jewgiński,
  • Kristian M. Müller,
  • Rafał Latajka,
  • Antoine Marion and
  • Norbert Sewald

Beilstein J. Org. Chem. 2022, 18, 1–12, doi:10.3762/bjoc.18.1

Graphical Abstract
  • -diaminobutyric acid (Dab), ornithine (Orn), or lysine (Lys). Utilising the Alloc protecting group allowed the coupling of 4-carboxyphenylboronic acid once the linear sequence had been synthesised (Scheme 2C). The intramolecular SMC between 6- or 7-bromotryptophan and the boronic acid afforded the stapled
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Published 03 Jan 2022

Stepwise PEG synthesis featuring deprotection and coupling in one pot

  • Logan Mikesell,
  • Dhananjani N. A. M. Eriyagama,
  • Yipeng Yin,
  • Bao-Yuan Lu and
  • Shiyue Fang

Beilstein J. Org. Chem. 2021, 17, 2976–2982, doi:10.3762/bjoc.17.207

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  • synthesis of monodisperse polyethylene glycols (PEGs) and their derivatives usually involves using an acid-labile protecting group such as DMTr and coupling the two PEG moieties together under basic Williamson ether formation conditions. Using this approach, each elongation of PEG is achieved in three steps
  • – deprotection, deprotonation and coupling – in two pots. Here, we report a more convenient approach for PEG synthesis featuring the use of a base-labile protecting group such as the phenethyl group. Using this approach, each elongation of PEG can be achieved in two steps – deprotection and coupling – in only
  • method is expected to significantly lower PEG synthesis cost. Keywords: base-labile; monodisperse; PEG; polyethylene glycol; protecting group; Introduction Polyethylene glycols and derivatives (PEGs) have found wide applications in many areas [1][2][3][4][5][6]. For some applications, polydisperse PEGs
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Published 28 Dec 2021

First total synthesis of hoshinoamide A

  • Haipin Zhou,
  • Zihan Rui,
  • Yiming Yang,
  • Shengtao Xu,
  • Yutian Shao and
  • Long Liu

Beilstein J. Org. Chem. 2021, 17, 2924–2931, doi:10.3762/bjoc.17.201

Graphical Abstract
  • washed with MeOH (3 × 20 mL) and DCM (3 × 20 mL). Tripeptide 8 was recovered (1.6 mmol). The unreacted resin was capped with MeOH in a mixture of MeOH/DIPEA/DCM (1:2:7, 10 mL) for 5 h. The Fmoc protecting group was removed following the general procedure and the remaining amino acids were successively
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Published 15 Dec 2021

Total synthesis of the O-antigen repeating unit of Providencia stuartii O49 serotype through linear and one-pot assemblies

  • Tanmoy Halder and
  • Somnath Yadav

Beilstein J. Org. Chem. 2021, 17, 2915–2921, doi:10.3762/bjoc.17.199

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  • step synthesis, though the former involved two extra steps for the synthesis of the first glycosidic donor and one chromatographic separation. The synthesis of the desired product was achieved through manipulations of the appropriate protecting group on the monosaccharides and subsequent realization of
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Published 13 Dec 2021

Highly stereocontrolled total synthesis of racemic codonopsinol B through isoxazolidine-4,5-diol vinylation

  • Lukáš Ďurina,
  • Anna Ďurinová,
  • František Trejtnar,
  • Ľuboš Janotka,
  • Lucia Messingerová,
  • Jana Doháňošová,
  • Ján Moncol and
  • Róbert Fischer

Beilstein J. Org. Chem. 2021, 17, 2781–2786, doi:10.3762/bjoc.17.188

Graphical Abstract
  • mixture of two rotamers in a ≈2:1 ratio at 25 °C, probably caused by the Cbz-protecting group (see Supporting Information File 1, page S26). It is worth mentioning that the attempts to prepare polyhydroxylated pyrrolidine 2 directly from epoxide 5 by the one pot Cbz-removal/aminocyclization under
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Published 24 Nov 2021

Synthetic strategies toward 1,3-oxathiolane nucleoside analogues

  • Umesh P. Aher,
  • Dhananjai Srivastava,
  • Girij P. Singh and
  • Jayashree B. S

Beilstein J. Org. Chem. 2021, 17, 2680–2715, doi:10.3762/bjoc.17.182

Graphical Abstract
  • ) the solvent, iv) presence of a participating or chiral auxiliary protecting group, v) the presence of a conformationally locked protecting group, vi) the presence of a glycosyl acceptor tethering group, and/or vii) the presence of an exogenous nucleophilic additive. The distinction between α- and β
  • ammonolysis in methanol affords compound 1c. The silylation of 1c with TBDPSCl was carried out, and then coupling reaction with tert-Boc-Met-Leu-Phe-OH in the presence of DCC and HOBt provided compound 98. The tert-Boc protecting group was further removed in formic acid, and the resulting nucleoside peptide
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Published 04 Nov 2021

N-Sulfinylpyrrolidine-containing ureas and thioureas as bifunctional organocatalysts

  • Viera Poláčková,
  • Dominika Krištofíková,
  • Boglárka Némethová,
  • Renata Górová,
  • Mária Mečiarová and
  • Radovan Šebesta

Beilstein J. Org. Chem. 2021, 17, 2629–2641, doi:10.3762/bjoc.17.176

Graphical Abstract
  • concomitant formation of the urea or thiourea moiety, respectively. The corresponding N-Boc-protected precursors of the desired catalysts, 5a and 5b, were obtained in low to good yields. The removal of the Boc-protecting group with trifluoroacetic acid afforded the desired N-sulfinylthioureas (S,R)- and (S,S
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Published 25 Oct 2021

Strategies for the synthesis of brevipolides

  • Yudhi D. Kurniawan and
  • A'liyatur Rosyidah

Beilstein J. Org. Chem. 2021, 17, 2399–2416, doi:10.3762/bjoc.17.157

Graphical Abstract
  • ester group was reduced to the primary alcohol 67 (95%). After protection as tert-butyldiphenylsilyl (TBDPS) ether 68 (98%), a Simmons–Smith cyclopropanation was attempted yet no desired product was obtained. Hence, the PMB-protecting group was first removed and the cyclopropyl product 69 was
  • derivative in 80% yield. The TBS protecting group was removed under acidic conditions to give secondary alcohol 93 (85%). Afterwards, the 5,6-dihydro-α-pyrone functionality was constructed by applying a cross-metathesis protocol and the stereochemistry at C6’ was inverted with (E)-p-methoxycinnamic acid (17
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Published 14 Sep 2021

Recent advances in the syntheses of anthracene derivatives

  • Giovanni S. Baviera and
  • Paulo M. Donate

Beilstein J. Org. Chem. 2021, 17, 2028–2050, doi:10.3762/bjoc.17.131

Graphical Abstract
  • -dibromo-2,5-dimethylbenzene (101), with subsequent Suzuki cross-coupling of compound 102 with potassium vinyltrifluoroborate, removal of the N-Boc protecting group of 103 with trifluoroacetic acid, and borylative cyclization of precursor aminostyrene 104 [58]. Sparr’s research group developed the 1,5
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Published 10 Aug 2021

Sustainable manganese catalysis for late-stage C–H functionalization of bioactive structural motifs

  • Jongwoo Son

Beilstein J. Org. Chem. 2021, 17, 1733–1751, doi:10.3762/bjoc.17.122

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  • future, such as protecting-group-free methodologies, peptide biosensors, and facile functionalizations within unexplored realms of complex peptides. Proposed reaction mechanism of C–H fluorination by a manganese porphyrin catalyst. Proposed mechanism of C–H radiofluorination. Proposed reaction mechanism
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Published 26 Jul 2021

Chemical synthesis of C6-tetrazole ᴅ-mannose building blocks and access to a bioisostere of mannuronic acid 1-phosphate

  • Eleni Dimitriou and
  • Gavin J. Miller

Beilstein J. Org. Chem. 2021, 17, 1527–1532, doi:10.3762/bjoc.17.110

Graphical Abstract
  •  2). This second route commenced with a three-step protecting group manipulation of primary alcohol 6, delivering 7 in 63% yield over three steps (Scheme 2). Alcohol 7 was then subjected to Parikh–Doering oxidation to deliver a crude aldehyde in 98% yield, from which oxime 8 was subsequently formed
  • try and improve the N1-PMB/N2-PMB ratio, converting 5 to a triethylammonium salt form in 94% yield was adopted [18]. Subsequent reaction with PMBCl gave 11 and 12, but in a largely unchanged ratio (N1-PMB/N2-PMB = 1:1.1). A comparative attempt to install a benzyl protecting group using this method
  • oligosaccharide synthesis strategy. With such capability effectively demonstrated, we next explored the provision of ᴅ-manno C6-tetrazoles without an orthogonal C4-protecting group. Accordingly, a synthesis initiating from alcohol 15 [19] enabled access to C6-nitrile 16 in three steps (Scheme 4) and an improved
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Published 05 Jul 2021

Total synthesis of ent-pavettamine

  • Memory Zimuwandeyi,
  • Manuel A. Fernandes,
  • Amanda L. Rousseau and
  • Moira L. Bode

Beilstein J. Org. Chem. 2021, 17, 1440–1446, doi:10.3762/bjoc.17.99

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  • -pavettamine rather than pavettamine. Chain extension and stereoselective ketone reduction were achieved using the (R)-methyl p-tolyl sulfoxide chiral auxiliary to give the desired 1,3-syn-diol C5 unit. A protecting-group strategy was also developed for the orthogonal protection of the alcohol and amine
  • retaining the stereogenic center. Divergence from the original route to pavettamine occurred after recovery of diol 5; and a different protecting group strategy was applied to arrive at synthon 4. The primary alcohol of the diol 5 was regioselectively protected using the trityl group under basic conditions
  • yielding 6 in quantitative yield. Our choice of the trityl protecting group was based on the fact that it could be selectively added in the presence of the secondary alcohol and selectively removed at a later stage in the presence of an orthogonally-protected secondary alcohol [16]. At this stage, the
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Published 10 Jun 2021

Double-headed nucleosides: Synthesis and applications

  • Vineet Verma,
  • Jyotirmoy Maity,
  • Vipin K. Maikhuri,
  • Ritika Sharma,
  • Himal K. Ganguly and
  • Ashok K. Prasad

Beilstein J. Org. Chem. 2021, 17, 1392–1439, doi:10.3762/bjoc.17.98

Graphical Abstract
  • -headed nucleoside 6. The removal of the silyl protecting group with NEt3·3HF in THF yielded 2′-(N-benzoylcytosin-1-yl)methyl-arabinofuranosyl-N-benzoylcytosine (7, Scheme 2) [42]. The double-headed nucleoside 7 was dimethoxytritylated and phosphitylated following the standard procedure and incorporated
  • hydroxy group was protected by reaction with pixyl chloride to afford the nucleoside 99. The removal of the tert-butyldimethylsilyl protecting group under standard conditions afforded the double-headed nucleoside 100 (Scheme 22) [14]. Opening of the epoxide ring in nucleoside 97 with sodium azide in DMF
  • nucleoside 102 with phenylacetylene in the presence of sodium ascorbate and copper sulfate in a solvent mixture of t-BuOH, water and pyridine, followed by the removal of the tert-butyldimethylsilyl protecting group gave nucleoside 103 (Scheme 22) [14]. Under similar reaction conditions, the treatment of
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Published 08 Jun 2021

A comprehensive review of flow chemistry techniques tailored to the flavours and fragrances industries

  • Guido Gambacorta,
  • James S. Sharley and
  • Ian R. Baxendale

Beilstein J. Org. Chem. 2021, 17, 1181–1312, doi:10.3762/bjoc.17.90

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Published 18 May 2021

N-tert-Butanesulfinyl imines in the asymmetric synthesis of nitrogen-containing heterocycles

  • Joseane A. Mendes,
  • Paulo R. R. Costa,
  • Miguel Yus,
  • Francisco Foubelo and
  • Camilla D. Buarque

Beilstein J. Org. Chem. 2021, 17, 1096–1140, doi:10.3762/bjoc.17.86

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  • the stereoselective synthesis of spiro β-lactam 57 from chiral (RS)-N-tert-butanesulfinyl isatin ketimine 53 (R1 = H), with a bulky trityl protecting group bonded to the nitrogen indolic atom (Tr = triphenylmethyl), and ethyl bromoacetate. The Zn/Cu-mediated Reformatsky-type reaction furnished
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Published 12 May 2021

Synthesis of multiply fluorinated N-acetyl-D-glucosamine and D-galactosamine analogs via the corresponding deoxyfluorinated glucosazide and galactosazide phenyl thioglycosides

  • Vojtěch Hamala,
  • Lucie Červenková Šťastná,
  • Martin Kurfiřt,
  • Petra Cuřínová,
  • Martin Dračínský and
  • Jindřich Karban

Beilstein J. Org. Chem. 2021, 17, 1086–1095, doi:10.3762/bjoc.17.85

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  • . Deoxyfluorination at C6 should then afford intermediates 6. Protecting-group manipulation of intermediates 4 and 6 should deliver the required fluoro analogs. The initially contemplated conversion of intermediates 3 into acetates 5 [26], followed by base-catalyzed O-deacetylation, led to substantial decomposition
  • a robust protecting group and to conduct final deprotection under neutral conditions. After initial experimentation with benzyl glycosides (Scheme 1, PG = OBn), phenyl thioglycosides (Scheme 1, PG = SPh), readily available from 1,6-anhydropyranoses [39] as we described earlier [40] were found to
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Published 11 May 2021

Recent advances in palladium-catalysed asymmetric 1,4–additions of arylboronic acids to conjugated enones and chromones

  • Jan Bartáček,
  • Jan Svoboda,
  • Martin Kocúrik,
  • Jaroslav Pochobradský,
  • Alexander Čegan,
  • Miloš Sedlák and
  • Jiří Váňa

Beilstein J. Org. Chem. 2021, 17, 1048–1085, doi:10.3762/bjoc.17.84

Graphical Abstract
  • -protecting group (Table 21) [49]. In other experiments, Stoltz and co-workers showed the ineffectiveness of the L9/Pd(TFA)2 catalytic system for the addition of phenylboronic acid to nonsubstituted 2-cyclohexenone, yielding the product with very low enantioselectivity (18%; entry 1, Table 22). Furthermore
  • intermediate, the protecting group was removed and the product was obtained in 88% yield and 80% ee. The enantiomeric excess of the obtained (S)-3-(hydroxymethyl)-3-phenyl-2-cyclopentanone could be increased by double recrystallization to up to 97% ee (Scheme 15) [4]. The catalytic system L9/Pd(TFA)2 was
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Published 10 May 2021
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