GlAIcomics: a deep neural network classifier for spectroscopy-augmented mass spectrometric glycans data

• Thomas Barillot,
• Baptiste Schindler,
• Baptiste Moge,
• Elisa Fadda,
• Franck Lépine and
• Isabelle Compagnon

Beilstein J. Org. Chem. 2023, 19, 1825–1831, doi:10.3762/bjoc.19.134

• ), thus providing valuable additional isomer resolution [4]. We demonstrated that this multidimensional MS–IR molecular fingerprint is unique to each carbohydrate building block and can be used to resolve their full sequence, including their monosaccharide content and the detail of their linkages

• a change in binning. To take this into account, data were binned with downgraded resolution then re-binned with 1 cm−1 step. The down sampling factor was randomly picked in a range from 1 to 5. Small variations of the calibration of the laser wavenumber may occur from day to day, leading to a shift

• a maximum accuracy variation of 0.5%. We demonstrated that the neural network is suitable for MS–IR classification in experimental conditions with variable resolution, noise or energy jitter. The question remains on how to discriminate unknown molecules or to identify problematic spectra, such as

A novel recyclable organocatalyst for the gram-scale enantioselective synthesis of (S)-baclofen

• Gyula Dargó,
• Dóra Erdélyi,
• Balázs Molnár,
• Péter Kisszékelyi,
• Zsófia Garádi and
• József Kupai

Beilstein J. Org. Chem. 2023, 19, 1811–1824, doi:10.3762/bjoc.19.133

• on a Bruker 300 Avance spectrometer (at 300 and 75.5 MHz for the 1H and 13C spectra, respectively) or on a Bruker Avance III HD (at 600 MHz for 1H and at 150 MHz for 13C spectra) at specified temperatures. High-resolution MS was measured on a Bruker MicroTOF II instrument using positive electrospray

Recent advancements in iodide/phosphine-mediated photoredox radical reactions

• Tinglan Liu,
• Yu Zhou,
• Junhong Tang and
• Chengming Wang

Beilstein J. Org. Chem. 2023, 19, 1785–1803, doi:10.3762/bjoc.19.131

• several synthetic challenges that require further investigation and resolution: First, the current reliance on redox-active esters as radical precursors in iodide/phosphine-mediated conversions restricts the potential applications of these conversions in synthesis. Therefore, it is highly recommended to

Active-metal template clipping synthesis of novel [2]rotaxanes

• Cătălin C. Anghel,
• Teodor A. Cucuiet,
• Niculina D. Hădade and
• Ion Grosu

Beilstein J. Org. Chem. 2023, 19, 1776–1784, doi:10.3762/bjoc.19.130

• ) relative to the residual solvent peak. High-resolution mass spectra were recorded on a ThermoScientific (LTQ XL, Orbitrap) spectrometer, in positive ion mode, using Electrospray or APCI techniques. Experimental procedures and characterization of compounds Compound 2: In a round-bottom flask compound 1

Selectivity control towards CO versus H₂ for photo-driven CO₂ reduction with a novel Co(II) catalyst

• Lisa-Lou Gracia,
• Philip Henkel,
• Olaf Fuhr and
• Claudia Bizzarri

Beilstein J. Org. Chem. 2023, 19, 1766–1775, doi:10.3762/bjoc.19.129

• high-resolution mass spectrometry (ESI), where it was shown the fragment corresponding to complex 1 that lost one isothiocyanate, [M − NCS]+, as the primary signal. Elemental analysis matched the calculated values, incorporating an additional MeOH molecule. Recrystallization was afforded by re

Unprecedented synthesis of a 14-membered hexaazamacrocycle

• Anastasia A. Fesenko and
• Anatoly D. Shutalev

Beilstein J. Org. Chem. 2023, 19, 1728–1740, doi:10.3762/bjoc.19.126

• -standard approach [44] (see the Supporting Information File 1 for details). The high-resolution mass spectrum (ESI+) of a mixture of 5 and the impurity, in addition to a peak at m/z = 329.1696 [M + H]+ for compound 5, shows a peak at m/z = 319.1862 [M + H]+, consistent with the molecular formula of

• structure (see Supporting Information File 1). The high-resolution mass spectrum (ESI+) confirmed its chemical formula as C12H16N12. Thus, we found that, in contrast to the reported data [40], the reaction between imidate 4 and hydrazine hydrate (4 equiv) in refluxing EtOH for 2 h afforded macrocycle 5 in a

• decoupling, DEPT-135 experiments as well as HMQC, HMBC, and NOESY correlation techniques were used to aid in the assignment of 1H and 13C NMR signals. Elemental analyses (CHN) were performed using a Thermo Finnigan Flash EA1112 apparatus. High-resolution mass spectra (HRMS) were obtained using a Bruker

A deep-red fluorophore based on naphthothiadiazole as emitter with hybridized local and charge transfer and ambipolar transporting properties for electroluminescent devices

• Suangsiri Arunlimsawat,
• Patteera Funchien,
• Pongsakorn Chasing,
• Atthapon Saenubol,
• Taweesak Sudyoadsuk and
• Vinich Promarak

Beilstein J. Org. Chem. 2023, 19, 1664–1676, doi:10.3762/bjoc.19.122

• )diboron catalyzed by Pd(dpf)Cl2/KOAc. Finally, TPECNz was obtained as red solid in a reasonable yield by a Suzuki-type cross-coupling reaction between 3 and 4,9-dibromonaphtho[2,3-c][1,2,5]thiadiazole. The chemical structure and purity of compound 3 were verified by 1H NMR, 13C NMR, and high-resolution

• purchased from commercial resources and used without further purification. 1H NMR and 13C NMR spectra were recorded with a Bruker AVANCE III HD 600 (600 MHz for 1H and 151 MHz for 13C) using CDCl3 as a solvent containing TMS as an internal standard. High-resolution mass spectrometry (HRMS) analysis was

Synthesis of 7-azabicyclo[4.3.1]decane ring systems from tricarbonyl(tropone)iron via intramolecular Heck reactions

• Aaron H. Shoemaker,
• Elizabeth A. Foker,
• Elena P. Uttaro,
• Sarah K. Beitel and
• Daniel R. Griffith

Beilstein J. Org. Chem. 2023, 19, 1615–1619, doi:10.3762/bjoc.19.118

• (Colby College) and Prof. Bruce Foxman (Brandeis University) for X-ray analysis of compound 8. High-resolution mass spectra were obtained at the Mass Spectrometry Lab at the University of Illinois. Funding We thank the donors of the American Chemical Society Petroleum Research Fund (Grant No. 59202-UNI1

Sulfur-containing spiroketals from Breynia disticha and evaluations of their anti-inflammatory effect

• Ken-ichi Nakashima,
• Naohito Abe,
• Masayoshi Oyama,
• Hiroko Murata and
• Makoto Inoue

Beilstein J. Org. Chem. 2023, 19, 1604–1614, doi:10.3762/bjoc.19.117

• disticha. The structures of compounds 1–7 were elucidated by extensive 1D and 2D NMR spectroscopic analyses, including 1D total correlation spectroscopy (TOCSY), HSQC, HMBC, double quantum-filtered (DQF)-COSY, heteronuclear two-bond correlation (H2BC), and HSQC-TOCSY experiments, as well as high-resolution

Radical chemistry in polymer science: an overview and recent advances

• Zixiao Wang,
• Feichen Cui,
• Yang Sui and
• Jiajun Yan

Beilstein J. Org. Chem. 2023, 19, 1580–1603, doi:10.3762/bjoc.19.116

• soluble upon radiation, respectively. Some early negative photoresists undergo a photochemical crosslinking process of 1,3-diene cyclic polymers [190] (cf. section 3.2), but such systems are no longer studied due to the poor resolution and sensitivity. On the other hand, positive resists based on

Secondary metabolites of Diaporthe cameroonensis, isolated from the Cameroonian medicinal plant Trema guineensis

• Bel Youssouf G. Mountessou,
• Élodie Gisèle M. Anoumedem,
• Blondelle M. Kemkuignou,
• Yasmina Marin-Felix,
• Frank Surup,
• Marc Stadler and
• Simeon F. Kouam

Beilstein J. Org. Chem. 2023, 19, 1555–1561, doi:10.3762/bjoc.19.112

• cameroonensis, isolated from the root of Trema guineensis, a Cameroonian medicinal plant from the family Ulmaceae [11]. Results Structural elucidation Diaporthe cameroonensis, which showed an interesting high-performance liquid chromatography–diode array detector–high-resolution mass spectrometry (HPLC–DAD–HRMS

Organic thermally activated delayed fluorescence material with strained benzoguanidine donor

• Alexander C. Brannan,
• Elvie F. P. Beaumont,
• Nguyen Le Phuoc,
• George F. S. Whitehead,
• Mikko Linnolahti and
• Alexander S. Romanov

Beilstein J. Org. Chem. 2023, 19, 1289–1298, doi:10.3762/bjoc.19.95

• deprotonation the latter with sodium hydride base. The compound shows poor solubility in most common organic solvents with moderate solubility in dichloromethane, 1,2-dichlorobenzene and dimethyl sulfoxide (DMSO). Compound 4BGIPN was characterized by high-resolution mass spectrometry (HRMS), elemental analysis

Unravelling a trichloroacetic acid-catalyzed cascade access to benzo[f]chromeno[2,3-h]quinoxalinoporphyrins

• Chandra Sekhar Tekuri,
• Pargat Singh and
• Mahendra Nath

Beilstein J. Org. Chem. 2023, 19, 1216–1224, doi:10.3762/bjoc.19.89

• . Acknowledgements The authors are grateful to the USIC, University of Delhi, Delhi, India for providing the NMR and high-resolution mass data. Funding MN is thankful to IoE, University of Delhi, India for providing a FRP grant. CT and PS are thankful to UGC, New Delhi, India for the award of Senior Research

Cyanothioacetamides as a synthetic platform for the synthesis of aminopyrazole derivatives

• Valeriy O. Filimonov,
• Alexandra I. Topchiy,
• Vladimir G. Ilkin,
• Tetyana V. Beryozkina and
• Vasiliy A. Bakulev

Beilstein J. Org. Chem. 2023, 19, 1191–1197, doi:10.3762/bjoc.19.87

• -diaminopyrazoles 4a–c (Scheme 2). The structures of compounds 4a–c were confirmed by 1H and 13C NMR spectroscopy data, as well as high-resolution mass spectrometry (HRMS). Compound 4a was previously obtained by another method [18]. The spectral characteristics of diaminopyrazole 4a reported in [18] correspond to

Synthesis of imidazo[4,5-e][1,3]thiazino[2,3-c][1,2,4]triazines via a base-induced rearrangement of functionalized imidazo[4,5-e]thiazolo[2,3-c][1,2,4]triazines

• Dmitry B. Vinogradov,
• Alexei N. Izmest’ev,
• Angelina N. Kravchenko,
• Yuri A. Strelenko and
• Galina A. Gazieva

Beilstein J. Org. Chem. 2023, 19, 1047–1054, doi:10.3762/bjoc.19.80

• in the thiazine ring leads to the cleavage of the triazine C–N bond. Further proton transfer gives product 9. The structures of the synthesized compounds 3a,b,j and 5a–k,m were confirmed by IR, 1H and 13C NMR spectroscopy, and high-resolution mass spectrometry. the potassium salts 3c–i,k,m were

The effect of dark states on the intersystem crossing and thermally activated delayed fluorescence of naphthalimide-phenothiazine dyads

• Liyuan Cao,
• Xi Liu,
• Xue Zhang,
• Jianzhang Zhao,
• Fabiao Yu and
• Yan Wan

Beilstein J. Org. Chem. 2023, 19, 1028–1046, doi:10.3762/bjoc.19.79

• resolution is 100 fs. Excitation pulses at 340 nm were produced by a commercial parametric amplifier. The pump beam polarization was set to the magic angle with respect to the probe beam. The probe beam was obtained by focusing a small portion of the fundamental 800 nm beam on a 2 mm CaF2 crystal, kept under

Intermediates and shunt products of massiliachelin biosynthesis in Massilia sp. NR 4-1

• Till Steinmetz,
• Blaise Kimbadi Lombe and
• Markus Nett

Beilstein J. Org. Chem. 2023, 19, 909–917, doi:10.3762/bjoc.19.69

• formula of 1 was assigned to be C15H19NO3S by high-resolution (HR) ESIMS (m/z 294.1180 [M + H]+; calcd. 294.1169 for C15H20NO3S), which indicated the presence of seven double bond equivalents (DBEs). Upon analyzing the 13C NMR spectrum, the DBEs were assigned to two ring structures, two carbon–heteroatom

• metabolites that are structurally related to the siderophore massiliachelin were recovered from a culture extract of Massilia sp. NR 4-1. The structures of the natural products were verified by high-resolution mass spectrometry as well as 1D and 2D NMR analyses. The newly found compounds are assumed to

First synthesis of acylated nitrocyclopropanes

• Kento Iwai,
• Rikiya Kamidate,
• Khimiya Wada,
• Haruyasu Asahara and
• Nagatoshi Nishiwaki

Beilstein J. Org. Chem. 2023, 19, 892–900, doi:10.3762/bjoc.19.67

• ) in CDCl3 using TMS as an internal standard. The assignments of the 13C NMR signals were performed by DEPT experiments. IR spectra were recorded on a JASCO FT/IR-4200 spectrometer equipped with an ATR detector. High-resolution mass spectra were obtained on AB SCIEX Triplet TOF 4600 and Bruker Compact

Eschenmoser coupling reactions starting from primary thioamides. When do they work and when not?

• Lukáš Marek,
• Jiří Váňa,
• Jan Svoboda and
• Jiří Hanusek

Beilstein J. Org. Chem. 2023, 19, 808–819, doi:10.3762/bjoc.19.61

• recorded on a Bruker Avance III 400 MHz or on a Bruker Ascend 500 MHz instrument. Chemical shifts (δ) are referenced to TMS (δ = 0) or solvent residual peaks δ(CDCl3) = 7.24 ppm (1H) and 77.0 ppm (13C), δ(DMSO-d6) = 2.50 ppm (1H) and 39.6 ppm (13C). High-resolution mass spectra were recorded on a MALDI LTQ

Synthesis of substituted 8H-benzo[h]pyrano[2,3-f]quinazolin-8-ones via photochemical 6π-electrocyclization of pyrimidines containing an allomaltol fragment

• Constantine V. Milyutin,
• Andrey N. Komogortsev,
• Boris V. Lichitsky,
• Mikhail E. Minyaev and
• Valeriya G. Melekhina

Beilstein J. Org. Chem. 2023, 19, 778–788, doi:10.3762/bjoc.19.58

• 11g–j were confirmed by 1H, 13C NMR spectroscopy and high-resolution mass spectrometry. In the 1H NMR spectra of the products, characteristic singlets corresponding to the protons of the dihydropyranone fragment in the region δ 5.3–5.4 ppm and the protons of the hydroxy group in the region δ 5.4–5.5

Construction of hexabenzocoronene-based chiral nanographenes

• Ranran Li,
• Di Wang,
• Shengtao Li and
• Peng An

Beilstein J. Org. Chem. 2023, 19, 736–751, doi:10.3762/bjoc.19.54

• octagon-containing carbo[5]helicene was isolated in a 61% yield, which can be further transformed into other chiral hydrocarbon analogues 12 and 13 [35]. Chiral resolution of these helicenes was accomplished by chiral high-performance liquid chromatography (HPLC) and the isomerization barriers were

• reaction [39]. Recently, An and co-workers reported a helical, azepine-containing NG 27 by the introduction of an NH in the seco-HBC framwork (Scheme 3). Single-crystal X-ray diffractometry revealed the mixed P/M enantiomers. Taking advantage of the grafting NH functional group, the optical resolution of

• distance of 3.2 Å compared with 96 and 100 [57]. The resolution of racemic 58 into its two enantiomers was achieved by chiral stationary phase HPLC. The CPL spectra showed a maximum centered at 688 nm with glum as 1.3 × 10−3. Chiral NGs containing more than three HBC units Recently, by fusing four HBC

pH-Responsive fluorescent supramolecular nanoparticles based on tetraphenylethylene-labelled chitosan and a six-fold carboxylated tribenzotriquinacene

• Nan Yang,
• Yi-Yan Zhu,
• Wei-Xiu Lin,
• Yi-Long Lu and
• Wen-Rong Xu

Beilstein J. Org. Chem. 2023, 19, 635–645, doi:10.3762/bjoc.19.45

• under an infrared lamp to prepare a sample for TEM measurement. The morphology of nanoparticles was observed at an accelerating voltage of 200 kV, and high-resolution TEM images were obtained. DLS and Zeta potential measurements. The measured samples were examined by a laser particle size analyzer

A new oxidatively stable ligand for the chiral functionalization of amino acids in Ni(II)–Schiff base complexes

• Alena V. Dmitrieva,
• Oleg A. Levitskiy,
• Yuri K. Grishin and
• Tatiana V. Magdesieva

Beilstein J. Org. Chem. 2023, 19, 566–574, doi:10.3762/bjoc.19.41

• chirality which exhibits no racemization under action of strong bases [29]. The chiral N–H-containing rimantadine-based ligand (L6) is highly lipophilic and it was successfully used for the kinetic resolution of unprotected racemic amino acids [30]. The examples mentioned above show that the metal–Schiff

Phenanthridine–pyrene conjugates as fluorescent probes for DNA/RNA and an inactive mutant of dipeptidyl peptidase enzyme

• Josipa Matić,
• Tana Tandarić,
• Marijana Radić Stojković,
• Filip Šupljika,
• Zrinka Karačić,
• Ana Tomašić Paić,
• Lucija Horvat,
• Robert Vianello and
• Lidija-Marija Tumir

Beilstein J. Org. Chem. 2023, 19, 550–565, doi:10.3762/bjoc.19.40

• (multiplet). High-resolution mass spectra (HRMS) were obtained using a MALDI–TOF/TOF mass spectrometer 4800 Plus MALDI TOF/TOF analyzer (Applied Biosystems Inc., Foster City, CA, USA). The electronic absorption spectra of newly prepared compounds, UV–vis titration and thermal melting experiments were

Asymmetric synthesis of a stereopentade fragment toward latrunculins

• Benjamin Joyeux,
• Antoine Gamet,
• Nicolas Casaretto and
• Bastien Nay

Beilstein J. Org. Chem. 2023, 19, 428–433, doi:10.3762/bjoc.19.32

• thiazolidinone ring, possibly leading to a strong conformational distortion of Mosher's model. The question of the resulting stereoselectivity was thus left open for later resolution. To complete this study, the 1,3-anti-diastereoselective reduction of β-hydroxyketone 21 was undertaken through the Evans