Machine learning-guided strategies for reaction conditions design and optimization

• Lung-Yi Chen and
• Yi-Pei Li

Beilstein J. Org. Chem. 2024, 20, 2476–2492, doi:10.3762/bjoc.20.212

• enhancing the overall chemical synthesis pathway. They demonstrated the predictive pathway for sonidegib synthesis, but it still required chemical insights to verify the compatibility of the solvents predicted by the global model with the reactants. Moreover, in a multistep synthesis route, the

• interdependencies between different reaction sequences, such as additional separation and purification steps, could reduce the overall yield [202]. This indicates that the suboptimal combination of each reaction does not necessarily represent the global optimum for multistep synthesis [203][204][205]. In contrast

• , this study was still able to identify better solutions than conventional designs through reinforcement learning in multistep processes. Besides maximizing the reaction yield for a given reaction with given substrates, another goal of reaction optimization is to discover general reaction conditions that

Hypervalent iodine-mediated cyclization of bishomoallylamides to prolinols

• Smaher E. Butt,
• Konrad Kepski,
• Jean-Marc Sotiropoulos and
• Wesley J. Moran

Beilstein J. Org. Chem. 2024, 20, 2455–2460, doi:10.3762/bjoc.20.209

• important area of study as this ring system is prevalent in many useful molecules. Typical literature procedures include multistep derivations of proline itself, e.g., the destruction of the stereocenter and then its reinstallation by an enantioselective conjugate addition [9]. Other methods include the

Improved deconvolution of natural products’ protein targets using diagnostic ions from chemical proteomics linkers

• Andreas Wiest and
• Pavel Kielkowski

Beilstein J. Org. Chem. 2024, 20, 2323–2341, doi:10.3762/bjoc.20.199

• disadvantage of the TEV-linker might be the multistep synthesis. The labile and open search of the publicly available data revealed a set of diagnostic ions, both derived from the linker and the probe (Figure 10A and B). The structural motives of the diagnostic ions corroborate the above-described findings

Multicomponent syntheses of pyrazoles via (3 + 2)-cyclocondensation and (3 + 2)-cycloaddition key steps

• Ignaz Betcke,
• Alissa C. Götzinger,
• Maryna M. Kornet and
• Thomas J. J. Müller

Beilstein J. Org. Chem. 2024, 20, 2024–2077, doi:10.3762/bjoc.20.178

• efficiency of these reactions. In particular, traditional multistep syntheses of pyrazoles have considerably been extended by MCR. Progress has been made in the cyclocondensation of 1,3-dielectrophiles that are generated in situ. Limitations in the regioselectivity of cyclocondensation with 1,3-dicarbonyls

The Groebke–Blackburn–Bienaymé reaction in its maturity: innovation and improvements since its 21st birthday (2019–2023)

• Cristina Martini,
• Muhammad Idham Darussalam Mardjan and
• Andrea Basso

Beilstein J. Org. Chem. 2024, 20, 1839–1879, doi:10.3762/bjoc.20.162

• multistep procedure, however, by employing 3,6-diamino-1,2,4-triazin-5-one 44 as amidine derivative, 46 could be simply obtained through a GBB-3CR. The amino group in position 3 was opportunely protected to drive the GBB reaction to the selective formation of 45. Microwave heating appeared to be beneficial

Chemo-enzymatic total synthesis: current approaches toward the integration of chemical and enzymatic transformations

• Ryo Tanifuji and
• Hiroki Oguri

Beilstein J. Org. Chem. 2024, 20, 1693–1712, doi:10.3762/bjoc.20.151

• tylactone (4), the combination of two large PKS modules with synthetic substrate mimics facilitated the multistep cascade reaction including carbon chain extension, installation of chiral centers, and macrolactonization in one pot (Scheme 7 and Scheme 8). Moreover, the "site- and stereoselective late-stage

Generation of alkyl and acyl radicals by visible-light photoredox catalysis: direct activation of C–O bonds in organic transformations

• Mithu Roy,
• Bitan Sardar,
• Itu Mallick and
• Dipankar Srimani

Beilstein J. Org. Chem. 2024, 20, 1348–1375, doi:10.3762/bjoc.20.119

• (Scheme 16). This one-pot strategy involved the reaction of xanthates formed in situ with electron-deficient alkenes under visible-light photoredox conditions in the presence of PPh3. This approach did not require multistep synthesis of starting materials. In addition, alcohol groups in polyols could be

Phenotellurazine redox catalysts: elements of design for radical cross-dehydrogenative coupling reactions

• Alina Paffen,
• Christopher Cremer and
• Frederic W. Patureau

Beilstein J. Org. Chem. 2024, 20, 1292–1297, doi:10.3762/bjoc.20.112

• the Te(II)-catalyzed benchmark dehydrogenative phenothiazination of phenols, a reaction that we discovered in 2015 [35][36][37], under analogous conditions as previously described [30][31][32]. The results are summarized in Scheme 2. The multistep synthesis and characterization of all Te-based

Stability trends in carbocation intermediates stemming from germacrene A and hedycaryol

• Naziha Tarannam,
• Prashant Kumar Gupta,
• Shani Zev and
• Dan Thomas Major

Beilstein J. Org. Chem. 2024, 20, 1189–1197, doi:10.3762/bjoc.20.101

• (GPP, FPP, GGPP) undergo highly complex cyclisation cascades forming terpenes and terpenoids that often have great structural complexity. For class I terpene synthases this multistep process is initiated by a heterolytic C–O bond cleavage, separating the diphosphate and isoprenoid ion pairs [3][4]. The

Innovative synthesis of drug-like molecules using tetrazole as core building blocks

• Jingyao Li,
• Ajay L. Chandgude,
• Qiang Zheng and
• Alexander Dömling

Beilstein J. Org. Chem. 2024, 20, 950–958, doi:10.3762/bjoc.20.85

• EtOH under refluxing overnight conditions which provides the desired 1H-tetrazole with an acceptable yield of 31%. Noteworthy, only two syntheses of 6 are described in the literature [28][29]. Both methods use dangerous, explosive and toxic hydrazoic acid in a sequential multistep synthesis. In

(Bio)isosteres of ortho- and meta-substituted benzenes

• H. Erik Diepers and
• Johannes C. L. Walker

Beilstein J. Org. Chem. 2024, 20, 859–890, doi:10.3762/bjoc.20.78

• planarity. Brown and co-workers prepared the [2]-ladderanes via a multistep sequence from diene 147 including an intramolecular [2 + 2] cycloaddition (to (±)-148) and a Wolff rearrangement (to (±)-150) (Scheme 16A) [63]. This approach yielded predominantly the endo diastereomer of trans-[2]-ladderanes 150

Chemoenzymatic synthesis of macrocyclic peptides and polyketides via thioesterase-catalyzed macrocyclization

• Senze Qiao,
• Zhongyu Cheng and
• Fuzhuo Li

Beilstein J. Org. Chem. 2024, 20, 721–733, doi:10.3762/bjoc.20.66

• review summarizes recent advances in combining thioesterase-catalyzed macrocyclization and typical chemical approaches in the rapid generation of these complex cyclic natural products and their analogs with exquisite biological activity. Moreover, multistep enzyme cascades simplify synthesis by reducing

Recent developments in the engineered biosynthesis of fungal meroterpenoids

• Zhiyang Quan and
• Takayoshi Awakawa

Beilstein J. Org. Chem. 2024, 20, 578–588, doi:10.3762/bjoc.20.50

• ) derived from andiconin, can be converted into emervaridone B (33) and anditomin (34), respectively (Figure 6). Subsequently, 33 can be further modified into emervaridone C (35), which can be oxidized to 37 or 38 (Figure 6). In contrast, 34 is converted to compounds 36a and 36b (Figure 6). These multistep

• common intermediate 21 to ascochlorin (22) and ascofuranone (23), respectively. The multistep oxidations catalyzed by AusE and PrhA from the common intermediate 24. Reactions of SptF with native substrates 31 and 32. A) Reactions of SptF with unnatural substrates. B) Reactions of SptF variants with 31

Perspectives on push–pull chromophores derived from click-type [2 + 2] cycloaddition–retroelectrocyclization reactions of electron-rich alkynes and electron-deficient alkenes

• Michio Yamada

Beilstein J. Org. Chem. 2024, 20, 125–154, doi:10.3762/bjoc.20.13

• a DCF structure and is amenable to further molecular transformations through a reaction with 1 [103]. Considering the structure of 7, the possibility of a multistep [2 + 2] CA–RE reaction via a reaction with 1 becomes feasible. To execute such a multistep [2 + 2] CA–RE reaction, it becomes

Controlling the reactivity of La@C₈₂ by reduction: reaction of the La@C₈₂ anion with alkyl halide with high regioselectivity

• Yutaka Maeda,
• Saeka Akita,
• Mitsuaki Suzuki,
• Michio Yamada,
• Takeshi Akasaka,
• Kaoru Kobayashi and
• Shigeru Nagase

Beilstein J. Org. Chem. 2023, 19, 1858–1866, doi:10.3762/bjoc.19.138

• the unreacted La@C2v-C82 in its neutral form. Four isomers, 2a, 3a, 4a, and 5a, and La@C2v-C82 were isolated from the reaction mixture using multistep HPLC, as shown in Supporting Information File 1, Figures S2, S4, and S6. The yields were calculated from the HPLC peak areas monitored at 330 nm

Unprecedented synthesis of a 14-membered hexaazamacrocycle

• Anastasia A. Fesenko and
• Anatoly D. Shutalev

Beilstein J. Org. Chem. 2023, 19, 1728–1740, doi:10.3762/bjoc.19.126

• geometry of this structure favors the formation of adduct D and then macrocycle 5. All these data explain the formation of macrocycle 5 from pyrazolopyrimidine 8 in acceptable yields (see Table 1), despite the multistep transformation (Scheme 6), rather harsh reaction conditions (>1.5 equivalents of N2H4

Decarboxylative 1,3-dipolar cycloaddition of amino acids for the synthesis of heterocyclic compounds

• Xiaofeng Zhang,
• Xiaoming Ma and
• Wei Zhang

Beilstein J. Org. Chem. 2023, 19, 1677–1693, doi:10.3762/bjoc.19.123

• -pot, and multistep reactions in the synthesis of heterocyclic compounds. The methods have advantages of using readily available starting materials, performing streamlined reactions, producing diverse product structures, and having high pot, atom, and step economy (PASE) [79][80][81] for the diversity

A deep-red fluorophore based on naphthothiadiazole as emitter with hybridized local and charge transfer and ambipolar transporting properties for electroluminescent devices

• Suangsiri Arunlimsawat,
• Patteera Funchien,
• Pongsakorn Chasing,
• Atthapon Saenubol,
• Taweesak Sudyoadsuk and
• Vinich Promarak

Beilstein J. Org. Chem. 2023, 19, 1664–1676, doi:10.3762/bjoc.19.122

• OLED realized a maximum external quantum efficiency (EQEmax) of 3.32% with an emission peak at 659 nm. Results and Discussion The designed TPECNz molecule was synthesized by a multistep reaction as described in Scheme 1. Initially, an Ullmann coupling reaction of bromo-TPE 1 and carbazole provided TPE

Unraveling the role of prenyl side-chain interactions in stabilizing the secondary carbocation in the biosynthesis of variexenol B

• Moe Nakano,
• Rintaro Gemma and
• Hajime Sato

Beilstein J. Org. Chem. 2023, 19, 1503–1510, doi:10.3762/bjoc.19.107

• offer many valuable insights from a fundamental organic chemistry perspective. The terpene cyclization cascade generally involves a multistep domino-type reaction. Therefore, it is challenging to reveal the detailed reaction mechanism solely by an experimental method. To address this issue

Synthesis of tetrahydrofuro[3,2-c]pyridines via Pictet–Spengler reaction

• Elena Y. Mendogralo and
• Maxim G. Uchuskin

Beilstein J. Org. Chem. 2023, 19, 991–997, doi:10.3762/bjoc.19.74

• -c]pyridines. Moreover, multistep cascade processes with the simultaneous construction of several cores were described, where the key step is the generation of an acyliminium cation and the Pictet–Spengler cyclization [30][31][32], including solid-phase synthesis [33][34][35]. Another route for the

Photoredox catalysis enabling decarboxylative radical cyclization of γ,γ-dimethylallyltryptophan (DMAT) derivatives: formal synthesis of 6,7-secoagroclavine

• Alessio Regni,
• Francesca Bartoccini and
• Giovanni Piersanti

Beilstein J. Org. Chem. 2023, 19, 918–927, doi:10.3762/bjoc.19.70

• requires a multistep process in conventional chemical synthesis [39][40][41]. Among the various widely available and abundant substrates for photocatalyzed reactions, natural and unnatural α-amino acids play a very important role, given their paramount importance across several chemistry fields as well as

Enolates ambushed – asymmetric tandem conjugate addition and subsequent enolate trapping with conventional and less traditional electrophiles

• Péter Kisszékelyi and
• Radovan Šebesta

Beilstein J. Org. Chem. 2023, 19, 593–634, doi:10.3762/bjoc.19.44

• methodology employed a multistep tandem procedure (Scheme 60): first, the alkylzirconium nucleophile was produced by hydrometalation of the functionalized alkene 142. Next, this organozirconium reagent was used in a Cu-catalyzed asymmetric conjugate addition to 3-methyl-2-cyclohex-2-ene-1-one (141) followed

Computational studies of Brønsted acid-catalyzed transannular cycloadditions of cycloalkenone hydrazones

• Manuel Pedrón,
• Jana Sendra,
• Irene Ginés,
• Tomás Tejero,
• Jose L. Vicario and
• Pedro Merino

Beilstein J. Org. Chem. 2023, 19, 477–486, doi:10.3762/bjoc.19.37

• materials and the conditions used [5]. Some common types of TCRs include Diels–Alder reactions [6][7][8][9][10][11][12][13][14][15][16][17][18][19][20], photocycloadditions [21][22][23][24][25][26][27][28], and other types of multistep cycloadditions [29]. Steric hindrance can have a significant effect on

Strategies to access the [5-8] bicyclic core encountered in the sesquiterpene, diterpene and sesterterpene series

• Cécile Alleman,
• Charlène Gadais,
• Laurent Legentil and
• François-Hugues Porée

Beilstein J. Org. Chem. 2023, 19, 245–281, doi:10.3762/bjoc.19.23

Germacrene B – a central intermediate in sesquiterpene biosynthesis

• Houchao Xu and
• Jeroen S. Dickschat

Beilstein J. Org. Chem. 2023, 19, 186–203, doi:10.3762/bjoc.19.18

• this multistep process is initiated by the abstraction of diphosphate to produce an allyl cation that subsequently undergoes typical cation reactions such as cyclisations by intramolecular attack of an olefin to the cationic centre, Wagner–Meerwein rearrangements, hydride or proton shifts. The process