Cationic oligonucleotide derivatives and conjugates: A favorable approach for enhanced DNA and RNA targeting oligonucleotides

• Mathias B. Danielsen and
• Jesper Wengel

Beilstein J. Org. Chem. 2021, 17, 1828–1848, doi:10.3762/bjoc.17.125

• -dimethylamino)ethoxy)ethyl) monomer 39 has been prepared and shown to moderately enhance RNA affinity and induce high nuclease resistance, similar to that of modification 34 [79]. Optimizing the triplex stability of complexes formed between modified TFOs and their dsDNA target is an important direction of

Development of N-F fluorinating agents and their fluorinations: Historical perspective

• Teruo Umemoto,
• Yuhao Yang and
• Gerald B. Hammond

Beilstein J. Org. Chem. 2021, 17, 1752–1813, doi:10.3762/bjoc.17.123

Sustainable manganese catalysis for late-stage C–H functionalization of bioactive structural motifs

• Jongwoo Son

Beilstein J. Org. Chem. 2021, 17, 1733–1751, doi:10.3762/bjoc.17.122

• natural abundance, cost-effectiveness, and low toxicity. In addition, it presents variable oxidation states (−3 to +7), which enable diverse catalytically active manganese complexes, providing characteristic reaction profiles. Since the first pioneering manganese-mediated reaction for accessing

• multiple steps to prepare suitable high-valent Mn complexes. Furthermore, Mn(I)-catalyzed enantioselective C–H functionalization at the late stage is still underexplored. Given the sustainability and versatility of manganese-catalyzed late-stage functionalization, further advances are expected in the

Cerium-photocatalyzed aerobic oxidation of benzylic alcohols to aldehydes and ketones

• Girish Suresh Yedase,
• Sumit Kumar,
• Jessica Stahl,
• Burkhard König and
• Veera Reddy Yatham

Beilstein J. Org. Chem. 2021, 17, 1727–1732, doi:10.3762/bjoc.17.121

• acting as the terminal oxidant [13][14][15][16][17][18][19][20][21][22][23][24][25][26][27][28][29][30][31][32][33]. Most aerobic oxidation reactions utilize either metal complexes and nanoparticles or persistent radical reagents as catalysts [21]. In the past ten years, visible light-induced

• mixing the (n-Bu4N)2CeIVCl6 complex with BnOH under basic conditions. The UV–vis spectra of the CeIV(OBn)Cln complex displayed a band resembling the LMCT band of known cerium–alkoxide complexes, showing considerable overlap with the blue LED region, thus suggesting that the CeIV(OBn)Cln species could be

Chemical approaches to discover the full potential of peptide nucleic acids in biomedical applications

• Nikita Brodyagin,
• Martins Katkevics,
• Venubabu Kotikam,
• Christopher A. Ryan and
• Eriks Rozners

Beilstein J. Org. Chem. 2021, 17, 1641–1688, doi:10.3762/bjoc.17.116

• amide linkages, to form strong and sequence specific complexes with natural DNA and RNA [3]. As will be discussed below, despite extensive studies [4][5][6], relatively few modifications have improved this simple original design. Since its inception, PNA has become an extremely useful research tool and

• involving PNA usually follow the order PNA–PNA > PNA–RNA > PNA–DNA [20][21]. Hybridization of PNA with complementary nucleic acids is enthalpy driven, involving large favorable gains in enthalpy compensated by significant unfavorable entropy, as typically observed for nucleic acid complexes [22]. The

• binding mode was also affected by PNA’s sequence with thymine-rich PNAs generally preferring invasion complexes and cytosine-rich PNAs generally preferring triple helix formation [25]. Overall, while PNA formed stronger triple helices with dsDNA than negatively charged oligonucleotides, the stability of

A recent overview on the synthesis of 1,4,5-trisubstituted 1,2,3-triazoles

• Pezhman Shiri,
• Ali Mohammad Amani and
• Thomas Mayer-Gall

Beilstein J. Org. Chem. 2021, 17, 1600–1628, doi:10.3762/bjoc.17.114

• prepared by Ru-catalyzed [3 + 2]-cycloaddition of ynoate esters 170 with azide to produce metal-bound heterocyclic complexes 171 via an intramolecular cycloaddition reaction. The ynoate esters including diethyl acetylenedicarboxylate, ethyl 4,4,4-trifluoro-2-butynoate, methyl phenylpropiolate, and ethyl 2

• -butynoate successfully generated the metal-bound heterocyclic complexes. The alkylation reaction of 171a led to the bond cleavage between ruthenium and nitrogen to produce several 1-alkylated 4,5-bis(ethoxycarbonyl)-1,2,3-triazoles 172 [66]. Herein, the sodium azide initially reacts with [Ru]–Cl 168 to

Methodologies for the synthesis of quaternary carbon centers via hydroalkylation of unactivated olefins: twenty years of advances

• Thiago S. Silva and
• Fernando Coelho

Beilstein J. Org. Chem. 2021, 17, 1565–1590, doi:10.3762/bjoc.17.112

• , numerous hydroalkylation methodologies have emerged that have explored the diverse reactivity patterns of the olefin double bond. This review presents examples of olefins acting as electrophilic partners when coordinated with electrophilic transition-metal complexes or, in more recent approaches, when used

• counterparts, and so therefore are examples of quaternary centers generated by this means. The tendency of σ-alkylpalladium complexes to undergo a β-hydride elimination process is the major obstacle associated with the development of successful methodologies to promote intermolecular hydroalkylation of

• . Cationic gold(I) complexes are also suitable catalysts for olefin functionalization, and their use has become more popular than gold(III) catalysis [39]. In 2007, Che and Zhou reported the olefin intramolecular hydroalkylation of N-alkenyl β-ketoamides 13 using the gold(I)–phosphine complex Au[P(t-Bu)2(o

Free-radical cyclization approach to polyheterocycles containing pyrrole and pyridine rings

• Ivan P. Mosiagin,
• Olesya A. Tomashenko,
• Dar’ya V. Spiridonova,
• Mikhail S. Novikov,
• Sergey P. Tunik and
• Alexander F. Khlebnikov

Beilstein J. Org. Chem. 2021, 17, 1490–1498, doi:10.3762/bjoc.17.105

• complexes, Au(I) [20], Ir(III) [21] and Eu(III) [22] (Scheme 1). According to the calculations, the isomeric pyrido[2,1-a]pyrrolo[3,4-c]isoquinoline system B (Scheme 1) should have no less interesting photophysical properties [17], than skeleton A but its synthesis is still a challenge. In particular

• ). It is important that the reaction of iodide 1m with 2-pyridyl substituent gave a good yield of the product 3m, which could be used for the preparation of bidentate ligand for metal complexes. Reaction of salts 1 with electron-donating para-substituents (Me, MeO, Me2N) in the pyridine ring (1n–p,s

Antiviral therapy in shrimp through plant virus VLP containing VP28 dsRNA against WSSV

• Santiago Ramos-Carreño,
• Ivone Giffard-Mena,
• Jose N. Zamudio-Ocadiz,
• Alfredo Nuñez-Rivera,
• Ricardo Valencia-Yañez,
• Jaime Ruiz-Garcia,
• Maria Teresa Viana and
• Ruben D. Cadena-Nava

Beilstein J. Org. Chem. 2021, 17, 1360–1373, doi:10.3762/bjoc.17.95

• ). The procapsids and CP-dsRNA complexes obtained after dialysis in assembly buffer (pH 7.2) can be observed in images a and b (Figure 2A). After the second dialysis in virus buffer (pH 4.5), well-defined VLPs were formed (Figure 2A, c, and d). Finally, the dialyzed sample is shown in Figure 2A, e, and f

• formation and CP-dsRNAi complexes (Figure 2A, images a and b). The Gaussian fit size distribution of the spherical procapsids gave an average diameter of 21.2 nm and corresponded to capsids with triangulation number T = 2. The sample’s dialysis at pH 7.2 favors the electrostatic interactions between CCMV CP

• -dsRNA to form procapsids and CP-RNA complexes [42]. The dsRNA negative charges can be neutralized by the positive N-terminal protein in these procapsids [42]. However, procapsids are not suitable for any treatment because they do not efficiently protect their cargo. The dsRNA in the procapsids may be

Heterogeneous photocatalytic cyanomethylarylation of alkenes with acetonitrile: synthesis of diverse nitrogenous heterocyclic compounds

• Guanglong Pan,
• Qian Yang,
• Wentao Wang,
• Yurong Tang and
• Yunfei Cai

Beilstein J. Org. Chem. 2021, 17, 1171–1180, doi:10.3762/bjoc.17.89

• ). Traditional g-C3N4 exhibited a low catalytic activity for this transformation (Table 1, entry 6). Switching from CN-K to a homogeneous organo photocatalyst such as eosin Y and 4CzIPN, led to lower yields of the desired product (Table 1, entries 7 and 8). The expensive Ru/Ir-based metal complexes gave similar

Structural effects of meso-halogenation on porphyrins

• Keith J. Flanagan,
• Maximilian Paradiz Dominguez,
• Zoi Melissari,
• Hans-Georg Eckhardt,
• René M. Williams,
• Dáire Gibbons,
• Caroline Prior,
• Gemma M. Locke,
• Alina Meindl,
• Aoife A. Ryan and
• Mathias O. Senge

Beilstein J. Org. Chem. 2021, 17, 1149–1170, doi:10.3762/bjoc.17.88

• ][12][13]. Such complexes have been reported for potential application in materials sciences (e.g., molecular sieves) as they form a three-dimensional lattice where more than 50% of the crystal capacity consists of open straight channels [5][6]. Noteworthy, Titi et al. reported that a chiral

• and combined with NSD analysis to approximate the IP and OOP distortion modes. The wB97XD functional was chosen because it has been shown to produce reliable energy minimized structures for organometallic complexes and metalloporphyrins [42][43][44]. With the first series (series 1) we looked at the

• complexes rather than direct interactions and alkyl moieties form a plethora of halogen···hydrogen interactions. Additionally, the substitution pattern greatly affects the overall conformation. By comparing the DFT calculated geometries with crystal structures we have found that DFT is a good approximation

Recent advances in palladium-catalysed asymmetric 1,4–additions of arylboronic acids to conjugated enones and chromones

• Jan Bartáček,
• Jan Svoboda,
• Martin Kocúrik,
• Jaroslav Pochobradský,
• Alexander Čegan,
• Miloš Sedlák and
• Jiří Váňa

Beilstein J. Org. Chem. 2021, 17, 1048–1085, doi:10.3762/bjoc.17.84

• given combination of enone and arylboronic acid. Keywords: asymmetric reaction; boronic acid; conjugated enones; chromones; enantioselective catalysis; Michael addition; Pd complexes; Introduction The asymmetric 1,4-addition of arylboronic acids to conjugated cyclic enones and chromones is a very

• important reaction nowadays. For illustration, the addition products are very promising in medicinal chemistry research [1][2][3][4][5][6][7] and in natural products total syntheses [8][9][10][11][12][13][14][15][16]. Chiral complexes of Rh [17][18][19][20][21][22][23][24] and Pd usually catalyse the

• %; 85% ee), but the reaction times were very short (Scheme 7) [41]. In 2011, the groups of Hayashi and Chujo studied Pd complexes of diphosphacrown ethers [42]. The macrocyclic Pd complex PdL5 in combination with AgSbF6 or AgOTf was tested for the addition reaction of various arylboronic acids to 2

Synthetic accesses to biguanide compounds

• Oleksandr Grytsai,
• Cyril Ronco and
• Rachid Benhida

Beilstein J. Org. Chem. 2021, 17, 1001–1040, doi:10.3762/bjoc.17.82

• such as lead tetraacetate, potassium permanganate, or refluxing hydrogen peroxide were shown to produce urea-derived degradation products [3]. Biguanides also possess a remarkable capability to form stable metal complexes, a property that was already noticed by B. Rathke in 1879 [4]. Indeed, he relied

• on this feature to isolate biguanide as a copper complex. Interestingly, transition metal-biguanide complexes often present vivid colors because of a strong absorption in the visible range. Biguanides have been used in chemistry as versatile starting materials in organic synthesis, catalysts [5

• transesterification of several vegetable oils [5]. Since the first reported copper-biguanide complex, the synthesis of a variety of stable biguanide complexes has been reported with VIV, CrIII, MnIII, MnIV, CoII, CoIII, NiII, CuII, ZnII, PdII, ReV, OsVI [8], etc. Many of these complexes found applications as

Manganese/bipyridine-catalyzed non-directed C(sp³)–H bromination using NBS and TMSN₃

• Kumar Sneh,
• Takeru Torigoe and
• Yoichiro Kuninobu

Beilstein J. Org. Chem. 2021, 17, 885–890, doi:10.3762/bjoc.17.74

• -position of an oxazoline or amide is selectively activated using a copper or palladium catalyst. Manganese is one of the most abundant and nontoxic transition metals found in the earth’s crust and its corresponding complexes and salts are useful in synthetic organic reactions [29][30][31][32][33][34][35

Highly regio- and stereoselective phosphinylphosphination of terminal alkynes with tetraphenyldiphosphine monoxide under radical conditions

• Dat Phuc Tran,
• Yuki Sato,
• Yuki Yamamoto,
• Shin-ichi Kawaguchi,
• Shintaro Kodama,
• Akihiro Nomoto and
• Akiya Ogawa

Beilstein J. Org. Chem. 2021, 17, 866–872, doi:10.3762/bjoc.17.72

• bidentate diphosphine ligands having a rigid structure and has increased attention as a useful and effective ligand in coordinating with various metals [19][20]. (Z)-Ph2PCH=CHPPh2 is very important as a bidentate ligand for many mononuclear complexes [21][22][23]. On the other hand, (E)-Ph2PCH=CHPPh2 acts

• as a monodentate ligand for mononuclear complexes, but it is highly attractive because a hierarchical structure can be constructed by cross-linking between two metals [24][25][26]. Considering the characteristics of the coordination form between the (E)- and (Z)-isomers, the development of a

Microwave-assisted multicomponent reactions in heterocyclic chemistry and mechanistic aspects

• Shivani Gulati,
• Stephy Elza John and
• Nagula Shankaraiah

Beilstein J. Org. Chem. 2021, 17, 819–865, doi:10.3762/bjoc.17.71

A chromatography-free and aqueous waste-free process for thioamide preparation with Lawesson’s reagent

• Ke Wu,
• Yichen Ling,
• An Ding,
• Liqun Jin,
• Nan Sun,
• Baoxiang Hu,
• Zhenlu Shen and
• Xinquan Hu

Beilstein J. Org. Chem. 2021, 17, 805–812, doi:10.3762/bjoc.17.69

• incomparable chelating ability towards selected transition metals, and the corresponding complexes were applied in various areas such as chemical-sensor materials, tunable redox-potential complexes, polymer hybrid luminescence materials, building blocks for multinuclear complexes, and as catalysts for cross

Synthetic reactions driven by electron-donor–acceptor (EDA) complexes

• Zhonglie Yang,
• Yutong Liu,
• Kun Cao,
• Xiaobin Zhang,
• Hezhong Jiang and
• Jiahong Li

Beilstein J. Org. Chem. 2021, 17, 771–799, doi:10.3762/bjoc.17.67

• the excited state, causing an electron transfer to give radicals and to initiate subsequent reactions. Besides light as an external energy source, reactions involving the participation of EDA complexes are mild, obviating transition metal catalysts or photosensitizers in the majority of cases and are

• in line with the theme of green chemistry. This review discusses the synthetic reactions concerned with EDA complexes as well as the mechanisms that have been shown over the past five years. Keywords: EDA complex; electron acceptor; electron donor; radical; visible light; Review Introduction

• synthesis has encouraged chemists to pursue more efficient methods to manufacture fine and usable chemicals [7]. The reactions that EDA complexes participate in have been shown to be an enormous success, mainly due to the fact that they obviate photoredox catalysts or transition metal catalysts in the vast

Synthesis of β-triazolylenones via metal-free desulfonylative alkylation of N-tosyl-1,2,3-triazoles

• Soumyaranjan Pati,
• Renata G. Almeida,
• Eufrânio N. da Silva Júnior and
• Irishi N. N. Namboothiri

Beilstein J. Org. Chem. 2021, 17, 762–770, doi:10.3762/bjoc.17.66

• , these diazo compounds undergo [3 + 2] cycloadditions with suitable substrates to render various nitrogen-rich heterocycles [39]. In addition to their synthetic importance, these are frequently encountered as ligands in many metal complexes [40][41][42][43]. Our group have also employed 1,3-dicarbonyl

DNA with zwitterionic and negatively charged phosphate modifications: Formation of DNA triplexes, duplexes and cell uptake studies

• Yongdong Su,
• Maitsetseg Bayarjargal,
• Tracy K. Hale and
• Vyacheslav V. Filichev

Beilstein J. Org. Chem. 2021, 17, 749–761, doi:10.3762/bjoc.17.65

• complexes with complementary DNA and RNA. Thermal denaturation experiments The thermal stability of antiparallel ON/RNA and ON/DNA duplexes as well as parallel DNA triplexes was assessed in thermal denaturation experiments and the results are summarised in Table 2. The sequences possessing a different

Synthesis of dibenzosuberenone-based novel polycyclic π-conjugated dihydropyridazines, pyridazines and pyrroles

• Ramazan Koçak and
• Arif Daştan

Beilstein J. Org. Chem. 2021, 17, 719–729, doi:10.3762/bjoc.17.61

• , antihypertensive, anti-Parkinson, anti-inflammatory, anticonvulsant, vasodilatory, antidiabetic, antitubercular, antifungal, and antibacterial activities [32][33][34][35][36][37][38], pH-sensing [39], OLEDs [40], chemiluminescent materials [41][42], metal complexes (Figure 1) [43][44][45][46], liquid crystal [47

• biochemical studies on these compounds, which have the potential to be used in chemosensors, light harvesting, organic optoelectronics, metal coordination complexes and other photophysical applications and in biological systems. Structures of dibenzosuberenone 1 and pyridazine and pyrrole derivatives

Synthesis, structural characterization, and optical properties of benzo[f]naphtho[2,3-b]phosphoindoles

• Mio Matsumura,
• Takahiro Teramoto,
• Masato Kawakubo,
• Masatoshi Kawahata,
• Yuki Murata,
• Kentaro Yamaguchi,
• Masanobu Uchiyama and
• Shuji Yasuike

Beilstein J. Org. Chem. 2021, 17, 671–677, doi:10.3762/bjoc.17.56

• approaches for phosphine oxide B [12][13][14], alkylated products C [15], and transition metal complexes D [16][17] have also been developed. However, for isomers E [18][19] and G [20], only the synthetic method for pentavalent phosphine oxides has been reported. To the best of our knowledge, the synthesis

[2 + 1] Cycloaddition reactions of fullerene C₆₀ based on diazo compounds

• Yuliya N. Biglova

Beilstein J. Org. Chem. 2021, 17, 630–670, doi:10.3762/bjoc.17.55

• ) and cobaltocene (Cp2Co) in order to create charge-transfer complexes with the purpose of searching for efficient magnetic materials based on fullerenes. It can be seen in Scheme 16 that methanofullerene 52 was obtained from the initial, also para-substituted, ethyl diazo(4-nitrophenyl)acetate in 32

• such an electron-enriched metal-containing system to C60 can result in push–pull blocks with new electronic and photochemical properties, as demonstrated by complexes 63, 64 [103], and 65 [104] in Figure 6. The syntheses of new types of N-containing fullerene ligands for metal complexes 66–68 are

• (Scheme 33). Сoordination of these compounds with ruthenium(II) leads to a donor–bridge–acceptor assembly of complexes with various lengths, 187–189. It is believed [153] that the photophysical and electrochemical properties of the complexes presented are promising for the formation of charge-separated

Valorisation of plastic waste via metal-catalysed depolymerisation

• Francesca Liguori,
• Carmen Moreno-Marrodán and
• Pierluigi Barbaro

Beilstein J. Org. Chem. 2021, 17, 589–621, doi:10.3762/bjoc.17.53

• catalyst replacements for zinc acetate in the glycolysis of PET are examples of this direction [129][130]. Recent studies focused on molecular complexes as homogeneous catalysts, whereas heterogeneous systems based on solid-supported metal nanoparticles (NPs) have been scarcely investigated. 3.1

• mediated by commercially available Ru homogeneous catalysts [148]. The process afforded C16 to C44 mixtures of macrocyclic oligobutadienes with up to 98% selectivity at moderate conversions (59–88%) using first-generation Ru complexes bearing a tricyclohexylphosphine (PCy3) ligand, mild reaction

• the glycolytic depolymerisation of PET [128][205]. The highest BHET yield (74.7%) was achieved using zinc chloride (0.5% w/w), an EG/PET ratio of 14:1 and reflux conditions (Table 2, entry 8). The use of preformed soluble Co(II) complexes bearing bidentate phosphorus ligands (e.g., 1,2-bis

Amino- and polyaminophthalazin-1(2H)-ones: synthesis, coordination properties, and biological activity

• Zbigniew Malinowski,
• Emilia Fornal,
• Agata Sumara,
• Renata Kontek,
• Karol Bukowski,
• Beata Pasternak,
• Dariusz Sroczyński,
• Joachim Kusz,
• Magdalena Małecka and
• Monika Nowak

Beilstein J. Org. Chem. 2021, 17, 558–568, doi:10.3762/bjoc.17.50

• -929 cell line, proved that some amino derivatives of phthalazinone show interesting anticancer activities. The detailed synthesis, spectroscopic data, and biological assays are reported. Keywords: amination; complexes; cytotoxicity; Pd cross-coupling; phthalazinone; Introduction Phthalazine and its

• anticancer drug vatalanib [26][27][28] (Figure 1). On the other hand, aminophthalazinones can be prospective candidates as N- and O-donor ligands to form complexes with biological significant metal ions, such as copper or zinc [29]. Recently, we have demonstrated a strategy for the synthesis of phthalazinone

• need to develop new and improve the existing methods for the synthesis of aminophthalazinones is important from the point of view of their properties and pharmaceutical industry interest. In the present work, we report results of our research on the synthesis, application as ligands in complexes, and