Discovery of unguisin J, a new cyclic peptide from Aspergillus heteromorphus CBS 117.55, and phylogeny-based bioinformatic analysis of UngA NRPS domains

• Sharmila Neupane,
• Marcelo Rodrigues de Amorim and
• Elizabeth Skellam

Beilstein J. Org. Chem. 2024, 20, 321–330, doi:10.3762/bjoc.20.32

• of several catalytic domains organized into modules. Typically, a module possesses an adenylation (A) domain for selecting and activating amino- or keto acids, a thiolation (T) domain for shuttling intermediates between catalytic domains, and a condensation (C) domain that catalyzes amide or ester

Synthesis of π-conjugated polycyclic compounds by late-stage extrusion of chalcogen fragments

• Aissam Okba,
• Pablo Simón Marqués,
• Kyohei Matsuo,
• Naoki Aratani,
• Hiroko Yamada,
• Gwénaël Rapenne and
• Claire Kammerer

Beilstein J. Org. Chem. 2024, 20, 287–305, doi:10.3762/bjoc.20.30

• thiepine via a two-fold Suzuki–Miyaura cross-coupling with 1,2-phenylenediboronic pinacol ester. The resulting S-doped extended tribenzothiepine 21 proved stable under ambient conditions for several months and exhibited good solubility in common organic solvents, which is ascribed to the boat-shape

Photochromic derivatives of indigo: historical overview of development, challenges and applications

• Gökhan Kaplan,
• Zeynel Seferoğlu and
• Daria V. Berdnikova

Beilstein J. Org. Chem. 2024, 20, 228–242, doi:10.3762/bjoc.20.23

• to the presence of the electron-withdrawing ester groups. Importantly, only the Z-form of 18c was found to be stable enough with a half-life of 2.8 min at room temperature in acetonitrile (77% of Z-isomer in PSS) and 4.1 minutes in toluene (91% of Z-isomer in PSS) after irradiation with red light

Optimizations of lipid II synthesis: an essential glycolipid precursor in bacterial cell wall synthesis and a validated antibiotic target

• Milandip Karak,
• Cian R. Cloonan,
• Brad R. Baker,
• Rachel V. K. Cochrane and
• Stephen A. Cochrane

Beilstein J. Org. Chem. 2024, 20, 220–227, doi:10.3762/bjoc.20.22

• -(phenylsulfonyl)ethyl ester, as previously reported by Saha and co-workers [44]. This modification prevents a deleterious side reaction occurring, wherein during glycosylation, muramic acid esters undergo a 6-exo-trig cyclization with the 4-OH group. Comprehensive experimental protocols detailing the preparation

• -anomers of compound 5. It is noteworthy to mention that the benzyl ether in compound 4 exhibited successful cleavage upon treatment with sodium bromate/sodium dithionite in ethyl acetate/water, while other protecting functionalities like acetyl and phenylsulfonylethyl ester groups remained intact [45

Copper-catalyzed multicomponent reaction of β-trifluoromethyl β-diazo esters enabling the synthesis of β-trifluoromethyl N,N-diacyl-β-amino esters

• Youlong Du,
• Haibo Mei,
• Ata Makarem,
• Ramin Javahershenas,
• Vadim A. Soloshonok and
• Jianlin Han

Beilstein J. Org. Chem. 2024, 20, 212–219, doi:10.3762/bjoc.20.21

• challenging. On the other hand, several interesting transformations of nitrile ylides from diazo compounds have been developed in the past years [31][32][33][34][35][36][37][38]. In particular, acylglycine esters could be easily constructed with ester-containing diazo compounds as the starting materials. For

• temperature proceeded to afford the desired unsymmetrical β-trifluoromethyl diacyl-β-amino ester 4a in 54% yield (Table 1, entry 1). The loading amount of catalyst CuI plays a crucial role in the formation of the desired product 4a. Increasing the loading amount of CuI, the yield could be raised to 66% when

• system to produce the expected product (4p). In addition, the β-trifluoromethyl β-amino benzyl ester substrates 1 with different ester groups were tried to react with benzoic acid (3a) to further extend the substrate range. To our delight, both the amines with electron-donating groups (4q and 4r) and

Chiral phosphoric acid-catalyzed transfer hydrogenation of 3,3-difluoro-3H-indoles

• Yumei Wang,
• Guangzhu Wang,
• Yanping Zhu and
• Kaiwu Dong

Beilstein J. Org. Chem. 2024, 20, 205–211, doi:10.3762/bjoc.20.20

• synthesis of optically active difluoro-substituted indoline derivatives starting from the corresponding 3H-indoles by chiral phosphoric acid-catalyzed transfer hydrogenation was developed. Using Hantzsch ester as the hydrogen source under mild reaction conditions, the target products can be obtained with

• excellent yield and enantioselectivity. Keywords: asymmetric organocatalysis; chiral Brønsted acid; 3,3-difluoroindoline; Hantzsch ester; transfer hydrogenation; Introduction The introduction of fluoro atoms into organic molecules can alter their lipophilicity, solubility, metabolic stability, and

• (1a) as the model substrate, Hantzsch ester (HE-Et) as the hydrogen source, and BINOL-derived chiral phosphoric acids (CPA) as the catalyst (Table 1). With chiral phosphoric acid CPA-1, the transfer hydrogenation reaction proceeded well in PhCF3 at room temperature and the target product 2a was

Metal-catalyzed coupling/carbonylative cyclizations for accessing dibenzodiazepinones: an expedient route to clozapine and other drugs

• Amina Moutayakine and
• Anthony J. Burke

Beilstein J. Org. Chem. 2024, 20, 193–204, doi:10.3762/bjoc.20.19

• ). These were eventually separated and used in the cyclization step discussed below. The dimethylated o-phenylenediamine 1d, gave the desired compound 3d in 51% yield. A slight decrease in yield was observed in the presence of an ester (COOEt) substituent, which furnished compound 3g in 43% yield. Lower

Tandem Hock and Friedel–Crafts reactions allowing an expedient synthesis of a cyclolignan-type scaffold

• Viktoria A. Ikonnikova,
• Cristina Cheibas,
• Oscar Gayraud,
• Alexandra E. Bosnidou,
• Nicolas Casaretto,
• Gilles Frison and
• Bastien Nay

Beilstein J. Org. Chem. 2024, 20, 162–169, doi:10.3762/bjoc.20.15

• oxocarbenium 7 and 7’ which exists as a stabilized form including an intramolecular stabilizing interaction between the carbocation and the ester carbonyl group. However, in close agreement with Hess and Baldwin’s values found for the rearrangement of cis-1,3-pentadiene [24], this transition state was high in

• % yields. The success of the reaction with an ester substituent to give 12k is surprising if we compare it with other electron-withdrawing groups like CN or NO2, which failed to give the corresponding cyclization products 12l–n (not shown). Instead, olefin products 13l–n arising from an elimination were

• structure shows one disordered ethyl ester group (backward). Examples of cyclolignan natural products [25][26][27]. The Hock rearrangement: (a) General mechanism (substituents are omitted); (b) Example of previous tandem process; (c) Objective of this work. One-pot conversion of substrate 1 into

Copper-promoted C5-selective bromination of 8-aminoquinoline amides with alkyl bromides

• Changdong Shao,
• Chen Ma,
• Li Li,
• Jingyi Liu,
• Yanan Shen,
• Chen Chen,
• Qionglin Yang,
• Tianyi Xu,
• Zhengsong Hu,
• Yuhe Kan and
• Tingting Zhang

Beilstein J. Org. Chem. 2024, 20, 155–161, doi:10.3762/bjoc.20.14

• tolerated, affording the desired products in excellent yields (92‒99%). These results indicated that the electronic effect of substituents affected the reaction only slightly. Products with substituents with derivatization feasibilities such as halogen (3ga–ia), acetyloxy (3ja), and ester groups (3ka) also

• . The scope of the bromination reaction was further extended with various alkyl bromides. As shown in Scheme 3, a series of activated alkyl bromides containing ester, difluoromethylene, benzyl motifs (2b–f), and unactivated alkyl bromides (2g–i) were evaluated in this reaction. Activated alkyl bromides

Perspectives on push–pull chromophores derived from click-type [2 + 2] cycloaddition–retroelectrocyclization reactions of electron-rich alkynes and electron-deficient alkenes

• Michio Yamada

Beilstein J. Org. Chem. 2024, 20, 125–154, doi:10.3762/bjoc.20.13

• adduct leads to the formation of a spiro compound [89][90][91][92][93][94]. Ester-substituted, electron-deficient alkenes have also been employed in [2 + 2] CA–RE reactions involving electron-rich alkynes. Alkenes featuring either one or two ester substitutions exclusively catalyze [2 + 2] CA–RE

• reactions, yielding multicyanated ethenes [95]. Contrarily, alkenes bearing three or four ester substitutions partake in a [4 + 2]-type hetero-Diels–Alder (DA) reaction, yielding a third product, presumably through a [3 + 2] cycloaddition reaction, followed by rearrangement. The [2 + 2] CA–RE reactions

Using the phospha-Michael reaction for making phosphonium phenolate zwitterions

• Matthias R. Steiner,
• Max Schmallegger,
• Larissa Donner,
• Johann A. Hlina,
• Christoph Marschner,
• Judith Baumgartner and
• Christian Slugovc

Beilstein J. Org. Chem. 2024, 20, 41–51, doi:10.3762/bjoc.20.6

• acceptor methyl acrylate reacts much faster in chloroform than acrylonitrile. A likely explanation is the preorganization of the Michael acceptor and donor by hydrogen bonding between the phosphine’s hydroxy group and the carbonyl group of the ester B’. Such a preorganization facilitates the proton

Facile access to pyridinium-based bent aromatic amphiphiles: nonionic surface modification of nanocarbons in water

• Lorenzo Catti,
• Shinji Aoyama and
• Michito Yoshizawa

Beilstein J. Org. Chem. 2024, 20, 32–40, doi:10.3762/bjoc.20.5

• sheets with thicknesses of 10–30 nm and widths of 150–300 nm (Figure 6c,d), indicating solubilization of (g-C3N4)m as 20–60 stacks. The encircled g-C3N4-based host–guest composite was subsequently deposited onto a mixed cellulose ester (MCE) filter (50 nm pore-size) using a simple filtration protocol

Synthesis of N-acyl carbazoles, phenoxazines and acridines from cyclic diaryliodonium salts

• Nils Clamor,
• Mattis Damrath,
• Thomas J. Kuczmera,
• Daniel Duvinage and
• Boris J. Nachtsheim

Beilstein J. Org. Chem. 2024, 20, 12–16, doi:10.3762/bjoc.20.2

• possible products. We obtained p-halogenide- and p-pseudohalogenide-substituted compounds 2c–g in good yields of 76–87%. It is noteworthy that the para-chloro-substituted compound 2f is a known fluorophore [5]. The reaction tolerated methoxy- and methyl ester-substitution to give 2h and 2i in 84% and 90

Construction of diazepine-containing spiroindolines via annulation reaction of α-halogenated N-acylhydrazones and isatin-derived MBH carbonates

• Xing Liu,
• Wenjing Shi,
• Jing Sun and
• Chao-Guo Yan

Beilstein J. Org. Chem. 2023, 19, 1923–1932, doi:10.3762/bjoc.19.143

• dihydrospiro[indoline-3,5'-[1,2]diazepines] 5a–i: A 10 mL reaction tube was charged with α-halogenated acylhydrazone (0.2 mmol), MBH ester of isatin (0.1 mmol), DABCO (0.2 mmol, 0.0224 g), and dichloromethane (4.0 mL) and the mixture was stirred at room temperature for 24 hours. After removing the solvent by

• ] 7a–l: A 10 mL reaction tube was charged with α-halogenated N-tosylhydrazone (0.2 mmol), MBH ester of isatin (0.2 mmol), triethylamine (0.4 mmol, 0.0364 g), and dichloromethane (4.0 mL) and the mixture was stirred at room temperature for three hours. After removing the solvent by rotatory evaporation

• -bromo-N-acylhydrazones were used. Yields refer to isolated compounds. Synthesis of spiro[indoline-3,5'-[1,2]diazepines] 5a–g. Conditions: α-halogenated acylhydrazone (0.2 mmol), MBH ester of isatin (0.1 mmol), DABCO (0.2 mmol), DCM (4.0 mL), rt, 24 h; aα-chloro-N-acylhydrazone was used, for other

Anion–π catalysis on carbon allotropes

• M. Ángeles Gutiérrez López,
• Mei-Ling Tan,
• Giacomo Renno,
• Augustina Jozeliūnaitė,
• J. Jonathan Nué-Martinez,
• Javier Lopez-Andarias,
• Naomi Sakai and
• Stefan Matile

Beilstein J. Org. Chem. 2023, 19, 1881–1894, doi:10.3762/bjoc.19.140

• control 12, a secondary Bingel amide in 13 caused a drop to A/D13/12 = 1.6. Similarly, low A/D14/12 = 1.5 for an ester in 14 supported that removal of the hydrogen-bond donor in 5 rather than steric constraints account for the decrease in anion–π catalysis. Elongation of the tether in the ester series 14

A novel recyclable organocatalyst for the gram-scale enantioselective synthesis of (S)-baclofen

• Gyula Dargó,
• Dóra Erdélyi,
• Balázs Molnár,
• Péter Kisszékelyi,
• Zsófia Garádi and
• József Kupai

Beilstein J. Org. Chem. 2023, 19, 1811–1824, doi:10.3762/bjoc.19.133

• acid ester 9 was hydrolyzed under basic conditions in an ethanol/water mixture. After the reaction, the pH of the mixture was adjusted to 4 with hydrochloric acid, which resulted in the precipitation of the product 10 in excellent yield (95%). Next, carboxylic acid 10 was converted into the

Recent advancements in iodide/phosphine-mediated photoredox radical reactions

• Tinglan Liu,
• Yu Zhou,
• Junhong Tang and
• Chengming Wang

Beilstein J. Org. Chem. 2023, 19, 1785–1803, doi:10.3762/bjoc.19.131

• . An EDA complex was formed through non-covalent interaction between the redox ester 10 and n-Bu4NI (Scheme 7). Subsequently, upon the photoexcitation, radical pairs I were generated via a SET process, accompanied by the liberation of CO2 and the phthalimide anion. The recombination of the alkyl

• ], it was proposed that the decarboxylative cascade cyclization reaction proceeded through the formation of a charge-transfer complex (CTC) II involving PPh3, NaI, and NHP ester 3 (Scheme 20). Upon photofragmentation of the CTC complex II, two important intermediates were generated: an alkyl radical A

Quinoxaline derivatives as attractive electron-transporting materials

• Zeeshan Abid,
• Liaqat Ali,
• Sughra Gulzar,
• Faiza Wahad,
• Raja Shahid Ashraf and
• Christian B. Nielsen

Beilstein J. Org. Chem. 2023, 19, 1694–1712, doi:10.3762/bjoc.19.124

• phenyl-C61-butyric acid methyl ester (PCBM) acceptor when used in bulk heterojunction polymer solar cell devices with poly(3-hexylthiophene) (P3HT) as the donor material. This improvement was attributed to the anchoring effect of the bulkier groups present in TQT-C60, which hindered the movement and

• and demonstrated n-type properties due to the electronegative Qx unit [53]. Mikie et al. explored ester-functionalized quinoxalines (QEs) as building units for both p-type and n-type polymers. They synthesized two new π-conjugated polymers, Qx51 and Qx-52, with low-lying HOMO (–5.5 eV) and LUMO (–3.4

A deep-red fluorophore based on naphthothiadiazole as emitter with hybridized local and charge transfer and ambipolar transporting properties for electroluminescent devices

• Suangsiri Arunlimsawat,
• Patteera Funchien,
• Pongsakorn Chasing,
• Atthapon Saenubol,
• Taweesak Sudyoadsuk and
• Vinich Promarak

Beilstein J. Org. Chem. 2023, 19, 1664–1676, doi:10.3762/bjoc.19.122

• -N-carbazole 2 in good yield (87%). Compound 2 was then converted to the boronic ester intermediate 3 in 41% yield over two steps: monobromination at the carbazole unit of 2 with NBS/THF at low temperature giving the unisolated mixed brominated product followed by borylation with bis(pinacolato

Sulfur-containing spiroketals from Breynia disticha and evaluations of their anti-inflammatory effect

• Ken-ichi Nakashima,
• Naohito Abe,
• Masayoshi Oyama,
• Hiroko Murata and
• Makoto Inoue

Beilstein J. Org. Chem. 2023, 19, 1604–1614, doi:10.3762/bjoc.19.117

• electrospray ionization HRESIMS analysis, and quantum chemical electronic CD calculations. Furthermore, the absolute configurations of sugar residues were determined by derivatization of the hydrolysates with ʟ-cysteine methyl ester and o-tolyl isothiocyanate followed by HPLC analysis. The anti-inflammatory

• by acid hydrolysis of 1 using the method developed by Tanaka et al. [16], in which the hydrolysates are derivatized with ʟ-cysteine methyl ester and o-tolyl isothiocyanate followed by HPLC analysis. For compound 1, peaks were observed at retention times of 13.96, 20.83, and 22.16 min. The peaks at

• 5.78 (d, J = 7.8 Hz, 1H, H-1′); δC 94.0 (C-1′)] implied that compound 4 was a β-glycosyl ester. The HMBC correlation of H-1′ with a carbonyl carbon [δC 174.7 (C-3)] revealed that esterification occurred at C-3 with a glucopyranose moiety at the anomeric position (Figure 4). A β-1,3-glucosyl linkage

α-(Aminomethyl)acrylates as acceptors in radical–polar crossover 1,4-additions of dialkylzincs: insights into enolate formation and trapping

• Angel Palillero-Cisneros,
• Paola G. Gordillo-Guerra,
• Fernando García-Alvarez,
• Olivier Jackowski,
• Franck Ferreira,
• Fabrice Chemla,
• Joel L. Terán and
• Alejandro Perez-Luna

Beilstein J. Org. Chem. 2023, 19, 1443–1451, doi:10.3762/bjoc.19.103

• , 1,4-additions of dialkylzinc reagents have been reported with dehydroamino ester derivatives [13][14] and α-bromoacrylates [15], which both involve an SH2 at zinc of tertiary α-alkoxycarbonyl radicals (Scheme 2, top). Here, the key to unlock the reactivity is the presence of a Lewis-basic substituent

• , thereby precluding its synthetic exploitation. Results and Discussion Preparation of α-(aminomethyl)acrylates We commenced our study by preparing a selection of α-(aminomethyl)acrylates with variations of the nitrogen protecting group and the ester substituent. Towards this end, the direct allylation of

• . Importantly, the protocol was found to be similarly applicable with enoates 8b (Table 3, entry 6) and 8c (entry 7) having tert-butyl and benzyl ester groups, which, as the methyl ester unit, are typical in the context of amino acid synthesis. ZnBu2 was also amenable to 1,4-addition (Table 3, entry 8), but not

Visible-light-induced nickel-catalyzed α-hydroxytrifluoroethylation of alkyl carboxylic acids: Access to trifluoromethyl alkyl acyloins

• Feng Chen,
• Xiu-Hua Xu,
• Zeng-Hao Chen,
• Yue Chen and
• Feng-Ling Qing

Beilstein J. Org. Chem. 2023, 19, 1372–1378, doi:10.3762/bjoc.19.98

• complex between Hantzsch ester and N-trifluoroethoxyphthalimide was subsequently engaged in a nickel-catalyzed coupling reaction with in situ-activated alkyl carboxylic acids. This convenient protocol does not require photocatalysts and metal reductants, providing a straightforward and efficient access to

• elegant strategies on direct conversion of in situ-activated carboxylic acids for ketone synthesis [27][35][38], we chose dimethyl dicarbonate (DMDC, A1) as the activating reagent. To our delight, the reaction of 1a and 2 in the presence of NiBr2(dtbbpy) (10 mol %), Hantzsch ester (HE) and A1 in DMAc

• -trifluoroethoxyphthalimide: In the glove box with nitrogen atmosphere, to an 8 mL vial equipped with a magnetic stir bar, NiBr2(dtbbpy) (19.6 mg, 0.04 mmol, 10 mol %), alkyl carboxylic acid 1 (0.4 mmol, 1.0 equiv), N-trifluoroethoxyphthalimide (2, 147.1 mg, 0.6 mmol, 1.5 equiv), Hantzsch ester (152.0 mg, 0.6 mmol, 1.5 equiv

Synthesis of ether lipids: natural compounds and analogues

• Marco Antônio G. B. Gomes,
• Alicia Bauduin,
• Chloé Le Roux,
• Romain Fouinneteau,
• Wilfried Berthe,
• Mathieu Berchel,
• Hélène Couthon and
• Paul-Alain Jaffrès

Beilstein J. Org. Chem. 2023, 19, 1299–1369, doi:10.3762/bjoc.19.96

• (plasmalogen) is highly sensitive to oxidation and it is reported that this function is even more reactive than unsaturated and polyunsaturated lipid chains [27]. Accordingly, plasmalogens could act as ROS scavenger and thus protect tissues (e.g., brain) from oxidative stress. The replacement of an ester

• mild conditions the benzylation of the alcohol function to yield 7.3. Then, the removing of the tosyl group required a two-step sequence. First, 7.3 reacted with cesium acetate and then the resulting ester was reduced with LiAlH4 to produce 7.4 with control of its stereochemistry. Very recently, a new

• with mCPBA produced the epoxide 13.3. Then, the addition of benzoic acid in the presence of acid catalysis produced an ester that was saponified to yield the diol 13.4. A three-step sequence is applied to produce compound 13.5 that features a secondary alcohol protected with a benzyl group. Then, the

Two new lanostanoid glycosides isolated from a Kenyan polypore Fomitopsis carnea

• Winnie Chemutai Sum,
• Sherif S. Ebada,
• Didsanutda Gonkhom,
• Cony Decock,
• Rémy Bertrand Teponno,
• Josphat Clement Matasyoh and
• Marc Stadler

Beilstein J. Org. Chem. 2023, 19, 1161–1169, doi:10.3762/bjoc.19.84

• methylene groups at δH 2.65/2.69 (H2-2') and δH 2.69/2.72 (H2-4') to an ester carbonyl (δC 172.4, C-1') and a carboxyl (δC 175.0, C-5'), respectively. In addition, both methylene groups together with a methyl singlet at δH 1.38 (s, H3-6') disclosed key HMBC correlations to a quaternary oxygenated carbon at

• of H-17 and C-21, respectively. By comparing the HRESIMS, 1H and 13C NMR data of compound 1 and those reported for forpinioside A [23][28], it was obviously recognized that compound 1 lacks the ester group at δH 3.62 (OCH3-5'; δC 51.9) on the 3-hydroxy-3-methylglutaroyl substituent. Further

• inducing cytotoxicity. In addition, another study demonstrated that a lanostanoid glycoside derivative with a glucosyl ester at the C-21 carboxylic acid group was active in a cytotoxic activity assay, whereas the galactosyl ester counterpart was inactive [36]. Similarly, the carboxylic acid group at C-21

Synthesis of imidazo[4,5-e][1,3]thiazino[2,3-c][1,2,4]triazines via a base-induced rearrangement of functionalized imidazo[4,5-e]thiazolo[2,3-c][1,2,4]triazines

• Dmitry B. Vinogradov,
• Alexei N. Izmest’ev,
• Angelina N. Kravchenko,
• Yuri A. Strelenko and
• Galina A. Gazieva

Beilstein J. Org. Chem. 2023, 19, 1047–1054, doi:10.3762/bjoc.19.80

• heterocyclic system, namely imidazo[4,5-e][1,3]thiazino[2,3-c][1,2,4]triazines 3 (Scheme 1B). Results and Discussion In a continuation of our studies [22] aimed at the synthesis of functionalized imidazothiazolotriazine derivatives, we attempted to hydrolyze the ester group of imidazothiazolotriazines 1 and to

• ][1,3]thiazino[2,3-c][1,2,4]triazines 3a–i as a result of ester group hydrolysis and thiazolidine ring expansion to the corresponding thiazine (Scheme 3). The potassium salts 3a,b were isolated in 81 and 63% yield, respectively. Compounds 3c–i were used in further transformations without isolation. 1H

• NMR reaction monitoring showed that compound 1d under conditions of excess of KOH in methanol undergoes alkaline hydrolysis along with transesterification of the ester group to give the ring-opened form 6d (Scheme 4), the maximum concentration of which was observed approximately 30 minutes after the