Computation-guided scaffold exploration of 2E,6E-1,10-trans/cis-eunicellanes

• Zining Li,
• Sana Jindani,
• Volga Kojasoy,
• Teresa Ortega,
• Erin M. Marshall,
• Khalil A. Abboud,
• Sandra Loesgen,
• Dean J. Tantillo and
• Jeffrey D. Rudolf

Beilstein J. Org. Chem. 2024, 20, 1320–1326, doi:10.3762/bjoc.20.115

• rearrangement (27.7 kcal mol−1; Figure S12, Supporting Information File 1) of uncharged 11 compared to that of 2 (Figure 3B). The free energy barrier value for 11 is likely too high to be non-enzymatic at 28 °C and may at least require deprotonation of the hydroxy group or at least H-bonding with solvent [23

Domino reactions of chromones with activated carbonyl compounds

• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 1256–1269, doi:10.3762/bjoc.20.108

• (Scheme 9) [39]. The formation of the products can be explained by 1,4-addition of the terminal carbon of the diene to the chromone to give intermediate J and subsequent attack of the central carbon atom of the 1,3-dicarbonyl unit (aldol reaction). No aromatization and extrusion of the hydroxy group was

• ) [40]. The formation of the products can be explained by 1,4-addition of the terminal carbon of the diene to the chromone to give intermediate O and subsequent attack of the central carbon atom of the 1,3-dicarbonyl unit (aldol reaction). No aromatization and extrusion of the hydroxy group was observed

• these products can be explained by initial formation of the corresponding 2-(salicyloyl)furans V. Iodination of the latter afforded iodonium salt W which underwent cyclization by attack of the salicylate hydroxy group to give intermediate X. Extrusion of hydrogen iodide afforded the final product

Cofactor-independent C–C bond cleavage reactions catalyzed by the AlpJ family of oxygenases in atypical angucycline biosynthesis

• Jinmin Gao,
• Liyuan Li,
• Shijie Shen,
• Guomin Ai,
• Bin Wang,
• Fang Guo,
• Tongjian Yang,
• Hui Han,
• Zhengren Xu,
• Guohui Pan and
• Keqiang Fan

Beilstein J. Org. Chem. 2024, 20, 1198–1206, doi:10.3762/bjoc.20.102

• [25]. On the other hand, the origin of 1, spontaneously derived from 8 under aerobic conditions, raises uncertainties about the actual production in vivo. Furthermore, the significance of the C12 hydroxy group in the hydroquinone intermediate 11 is evident in subsequent reactions, including the

• formation of a hemiacetal intermediate in gilvocarcin biosynthesis [9][38][39] and the AlpH-catalyzed ʟ-glutamylhydrazine adduct formation [14]. Notably, this C12 hydroxy group is absent in the quinone intermediate 3 of the cofactor-dependent pathway. Collectively, these observations suggest that the

Stability trends in carbocation intermediates stemming from germacrene A and hedycaryol

• Naziha Tarannam,
• Prashant Kumar Gupta,
• Shani Zev and
• Dan Thomas Major

Beilstein J. Org. Chem. 2024, 20, 1189–1197, doi:10.3762/bjoc.20.101

• below. This analysis allows us to understand the correlation between the stability of hedycaryols and the C+···OH distances, as this descriptor presents the difference in stability trends between hedycaryol and germacrene A cations, which is due to the hydroxy group in hedycaryol cations. where ΔΔEHed

• more stable than the 5-7 bicyclic compounds. Although the stability trends among the germacrene A and hedycaryol derived cations are similar, some changes in these trends may be ascribed to the hydroxy group in hedycaryol carbocations, which can stabilize the cations via lone pair–cation interaction

A Diels–Alder probe for discovery of natural products containing furan moieties

• Alyssa S. Eggly,
• Namuunzul Otgontseren,
• Carson B. Roberts,
• Amir Y. Alwali,
• Haylie E. Hennigan and
• Elizabeth I. Parkinson

Beilstein J. Org. Chem. 2024, 20, 1001–1010, doi:10.3762/bjoc.20.88

• well with flufuran (23), having a 92% conversion. The slightly lower conversion is most likely due to the loss of the hydroxy group at the four position and is not surprising as it aligns with the results of 3-furoic acid (14). After demonstrating the probe could undergo the Diels–Alder reaction with

Carbonylative synthesis and functionalization of indoles

• Alex De Salvo,
• Raffaella Mancuso and
• Xiao-Feng Wu

Beilstein J. Org. Chem. 2024, 20, 973–1000, doi:10.3762/bjoc.20.87

• ) species and the triple bond that promotes an intramolecular nucleophilic attack of the amino group giving a indolcyclopalladium species. This is followed by CO insertion and intramolecular nucleophilic displacement by the hydroxy group to give the indole–PdII-cycle derivate. The reaction ends with a

Confirmation of the stereochemistry of spiroviolene

• Yao Kong,
• Yuanning Liu,
• Kaibiao Wang,
• Tao Wang,
• Chen Wang,
• Ben Ai,
• Hongli Jia,
• Guohui Pan,
• Min Yin and
• Zhengren Xu

Beilstein J. Org. Chem. 2024, 20, 852–858, doi:10.3762/bjoc.20.77

• Abstract We confirm the previously revised stereochemistry of spiroviolene by X-ray crystallographically characterizing a hydrazone derivative of 9-oxospiroviolane, which is synthesized by hydroboration/oxidation of spiroviolene followed by oxidation of the resultant hydroxy group. An unexpected thermal

• hydroxy group, or a keto group) for further derivatization. Spiroviolene was not transformed when subjected to conditions for allylic oxidation (SeO2) even at elevated temperature [27], and the starting material was fully recovered. We have also tried hydroboration/oxidation conditions for transforming

• BH3·THF in THF, and heated at 60 °C for 3 days. After oxidative treatment of the resultant alkylborane products with NaOH/H2O2, we have obtained three derivatives 9–11 with one hydroxy group in 37%, 30% and 21% isolated yield, respectively, as well as recovery of 10% of the starting material. After

Ortho-ester-substituted diaryliodonium salts enabled regioselective arylocyclization of naphthols toward 3,4-benzocoumarins

• Ke Jiang,
• Cheng Pan,
• Limin Wang,
• Hao-Yang Wang and
• Jianwei Han

Beilstein J. Org. Chem. 2024, 20, 841–851, doi:10.3762/bjoc.20.76

• 3au and 3av were produced in 34% and 39% yields, respectively, in which methoxy and tert-butyl groups were located in the para position to the hydroxy group (Table 2, entries 20 and 21). In the case of 3al, the mono-arylation of naphthol generated 3al’ in 20% isolated yield, which is the reason for

Activity assays of NnlA homologs suggest the natural product N-nitroglycine is degraded by diverse bacteria

• Kara A. Strickland,
• Brenda Martinez Rodriguez,
• Ashley A. Holland,
• Shelby Wagner,
• Michelle Luna-Alva,
• David E. Graham and
• Jonathan D. Caranto

Beilstein J. Org. Chem. 2024, 20, 830–840, doi:10.3762/bjoc.20.75

• . It is somewhat surprising that NnlA cannot degrade 2-NAE given its structural similarities with NNG. The structural difference between the two molecules is the replacement of the α-carboxylate of NNG with a hydroxy group in 2-NAE. While a decrease in substrate affinity might be expected, there was no

Discovery and biosynthesis of bacterial drimane-type sesquiterpenoids from Streptomyces clavuligerus

• Dongxu Zhang,
• Wenyu Du,
• Xingming Pan,
• Xiaoxu Lin,
• Fang-Ru Li,
• Qingling Wang,
• Qian Yang,
• Hui-Min Xu and
• Liao-Bin Dong

Beilstein J. Org. Chem. 2024, 20, 815–822, doi:10.3762/bjoc.20.73

• that the only difference between compounds 3 and 2 is the position of the hydroxy group [28]. Analyses of the NMR data of compound 4 concluded that it is an analogue of 2. In comparison with 2, compound 4 has a ketone carbonyl signal at δC 219.1 and we finally confirmed its structure by comparing it

• differences in 13C NMR (ΔδC = 3.3) (Figures S19–S25, Supporting Information File 1) [43]. Moreover, the key correlation observed between H5 and H7 in the ROESY spectrum provides additional support for the β-configuration of this hydroxy group (Figure S26 and Table S7 in Supporting Information File 1). These

Advancements in hydrochlorination of alkenes

• Daniel S. Müller

Beilstein J. Org. Chem. 2024, 20, 787–814, doi:10.3762/bjoc.20.72

• , requiring four steps, coupled with the expense of the palladium catalyst. Interestingly, when the hydroxy group in L3 was protected, the chemoselectivity of the reaction was poor, resulting in a 1:2 mixture of the desired chloride and the corresponding terminal alkene. Liu and colleagues put forth the

New variochelins from soil-isolated Variovorax sp. H002

• Jabal Rahmat Haedar,
• Aya Yoshimura and
• Toshiyuki Wakimoto

Beilstein J. Org. Chem. 2024, 20, 692–700, doi:10.3762/bjoc.20.63

• -methylheptanoic acid moieties in 3–5 have the same absolute configurations as those of 1. In particular, the β-hydroxy group at the Asp residue is introduced by the hydroxylase domain (TauD) embedded in VarG. This type of hydroxylase reportedly generates ʟ-erythro-Hya, in agreement with the proposed structures of

Chemical and biosynthetic potential of Penicillium shentong XL-F41

• Ran Zou,
• Xin Li,
• Xiaochen Chen,
• Yue-Wei Guo and
• Baofu Xu

Beilstein J. Org. Chem. 2024, 20, 597–606, doi:10.3762/bjoc.20.52

• enzymatic ring-expansion process in their respective fungi. Both shentonins A (1) and B (2) also feature a reduction of a carbonyl to a hydroxy group within the succinimide ring. All isolated compounds were subjected to antimicrobial evaluations, and compound 12 was found to have moderate inhibitory

A myo-inositol dehydrogenase involved in aminocyclitol biosynthesis of hygromycin A

• Michael O. Akintubosun and
• Melanie A. Higgins

Beilstein J. Org. Chem. 2024, 20, 589–596, doi:10.3762/bjoc.20.51

• 584 sequences were near an acyl synthase domain, 340 sequences by an acyl carrier protein domain, and 1,193 sequences by a thioesterase domain. In addition, Hyg17 works together with the aminotransferase Hyg8 to replace a hydroxy group with an amine generating an aminocyclitol from myo-inositol. We

Recent developments in the engineered biosynthesis of fungal meroterpenoids

• Zhiyang Quan and
• Takayoshi Awakawa

Beilstein J. Org. Chem. 2024, 20, 578–588, doi:10.3762/bjoc.20.50

• meroterpenoids: insuetusin A1 (12) and insuetusin B1 (10), respectively (Figure 2) [9]. Like other Trt1-type enzymes, InsB2 catalyzes the protonation of the epoxide, the formation of two six-membered rings in a chair–chair conformation, but the reaction finishes with the deprotonation of the hydroxy group at C-3

• hydroxy group terminates the cyclization [20][21]. In ascofuranone biosynthesis, compound 21 is initially hydroxylated at C-8, and then the hydroxylated product is cyclized via epoxidation by AscI to form the tetrahydrofuran ring of 23. The biosynthetic pathways of 22 and 23 were elucidated through

Green and sustainable approaches for the Friedel–Crafts reaction between aldehydes and indoles

• Periklis X. Kolagkis,
• Eirini M. Galathri and
• Christoforos G. Kokotos

Beilstein J. Org. Chem. 2024, 20, 379–426, doi:10.3762/bjoc.20.36

Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin

• Jon Lundstrøm,
• Emilie Gillon,
• Valérie Chazalet,
• Nicole Kerekes,
• Antonio Di Maio,
• Ten Feizi,
• Yan Liu,
• Annabelle Varrot and
• Daniel Bojar

Beilstein J. Org. Chem. 2024, 20, 306–320, doi:10.3762/bjoc.20.31

• nitrogen. CH−π stacking and hydrophobic interactions occur between the aromatic ring of Trp36 and the alpha face of the ring as well as the hydroxymethyl moiety of the galactose residue, additionally ensuring specificity for galactoside over glucoside as an equatorial conformation of the O4 hydroxy group

Nucleophilic functionalization of thianthrenium salts under basic conditions

• Xinting Fan,
• Duo Zhang,
• Xiangchuan Xiu,
• Bin Xu,
• Yu Yuan,
• Feng Chen and
• Pan Gao

Beilstein J. Org. Chem. 2024, 20, 257–263, doi:10.3762/bjoc.20.26

• accessible and have significant importance in the pharmaceutical industry, positioning them as appealing candidates for C(sp3) coupling due to their availability as a common chemical feedstock. However, due to the high bond dissociation energy of the C–O bond and the poor leaving ability of the hydroxy group

Comparison of glycosyl donors: a supramer approach

• Anna V. Orlova,
• Nelly N. Malysheva,
• Maria V. Panova,
• Nikita M. Podvalnyy,
• Michael G. Medvedev and
• Leonid O. Kononov

Beilstein J. Org. Chem. 2024, 20, 181–192, doi:10.3762/bjoc.20.18

• sialylation of the primary hydroxy group of the same galactose derivative 3 [54] (see Scheme 1), which eventually led to unprecedented conclusions concerning the very possibility of comparison of chemical properties of different glycosyl donors. Results Synthesis of glycosyl donor 2 Sialyl donor 2 was

Tandem Hock and Friedel–Crafts reactions allowing an expedient synthesis of a cyclolignan-type scaffold

• Viktoria A. Ikonnikova,
• Cristina Cheibas,
• Oscar Gayraud,
• Alexandra E. Bosnidou,
• Nicolas Casaretto,
• Gilles Frison and
• Bastien Nay

Beilstein J. Org. Chem. 2024, 20, 162–169, doi:10.3762/bjoc.20.15

• methide intermediate 9 upon elimination of the hydroxy group. This highly electrophilic species could trigger a second intramolecular Friedel–Crafts reaction leading to 6. The cyclic connectivity of 6 was determined by bidimensional NMR experiments, incidentally showing a broadening of the signals of

Using the phospha-Michael reaction for making phosphonium phenolate zwitterions

• Matthias R. Steiner,
• Max Schmallegger,
• Larissa Donner,
• Johann A. Hlina,
• Christoph Marschner,
• Judith Baumgartner and
• Christian Slugovc

Beilstein J. Org. Chem. 2024, 20, 41–51, doi:10.3762/bjoc.20.6

• synthesis of carbonates from CO2 [24][25][26] and the synthesis of oxazolidines from isocyanates and epoxides [27]. Furthermore, their application in primary hydroxy group selective acylation of diols [28] and their use as organophotoredox catalysts [29][30] is known. The latter mentioned catalysts are

• acceptor methyl acrylate reacts much faster in chloroform than acrylonitrile. A likely explanation is the preorganization of the Michael acceptor and donor by hydrogen bonding between the phosphine’s hydroxy group and the carbonyl group of the ester B’. Such a preorganization facilitates the proton

• transfer [34] from the hydroxy group to the initial zwitterion via B’’ and B’’’ resulting in C. In this case, the proton at the α-position to the electron-withdrawing group is stemming from the phenol moiety. Methyl acrylate in methanol is the fastest reaction presumably because both pathways, the

Selectivity control towards CO versus H₂ for photo-driven CO₂ reduction with a novel Co(II) catalyst

• Lisa-Lou Gracia,
• Philip Henkel,
• Olaf Fuhr and
• Claudia Bizzarri

Beilstein J. Org. Chem. 2023, 19, 1766–1775, doi:10.3762/bjoc.19.129

• solvents and with water, it has been used in a large variety of (electro)chemical reactions [53]. The hydroxy group of this alcohol has a pKa of 9.3 [54][55], so we can expect that it is a suitable proton donor for this kind of reaction. We performed the photocatalytic CO2 reduction by dissolving in 5 mL 1

Trifluoromethylated hydrazones and acylhydrazones as potent nitrogen-containing fluorinated building blocks

• Zhang Dongxu

Beilstein J. Org. Chem. 2023, 19, 1741–1754, doi:10.3762/bjoc.19.127

• presence of Brønsted acid. In their pioneering research, Tanaka et al. reported the [3 + 2] cycloaddition reactions of trifluoroacetaldehyde hydrazones and glyoxals to give 4-hydroxy-3-trifluoromethylpyrazoles. The resultant pyrazoles containing a free 4-hydroxy group were easily converted to a variety of

Effects of the aldehyde-derived ring substituent on the properties of two new bioinspired trimethoxybenzoylhydrazones: methyl vs nitro groups

• Dayanne Martins,
• Roberta Lamosa,
• Talis Uelisson da Silva,
• Carolina B. P. Ligiero,
• Sérgio de Paula Machado,
• Daphne S. Cukierman and
• Nicolás A. Rey

Beilstein J. Org. Chem. 2023, 19, 1713–1727, doi:10.3762/bjoc.19.125

• phenolic hydroxy group and the azomethine nitrogen was identified in the solid state and seems to be maintained in solution. Moreover, the presence of the electron-withdrawing nitro substituent makes this interaction stronger. However, the contact should probably not subsist for the nitro compound under

• -substituent in the aldehyde-derived portion of hdz-NO2 caused a strong deshielding of the hydroxy group (assigned at 12.84 ppm) due to the removal of electron density on the carbon adjacent to –OH. On the other hand, in hdz-CH3, the presence of the methyl substituent moderately shields this proton (11.89 ppm

• ). A comparison of the H7 and –OH chemical shifts of the related hydrazones hdz-CH3 and hdz-NO2 indicates that, also in solution, the intramolecular H-bond is stronger in the latter. Since N-acylhydrazones may be susceptible to hydrolysis, especially those containing a hydroxy group in ortho-position

Synthesis of 5-arylidenerhodanines in L-proline-based deep eutectic solvent

• Stéphanie Hesse

Beilstein J. Org. Chem. 2023, 19, 1537–1544, doi:10.3762/bjoc.19.110

• hydroxy group showed DPPH radical scavenging activity. Compound 3d with a catechol-like structure exhibited the best antioxidant activity. Experimental General procedure for the Knoevenagel condensation DES (0.8 g) was introduced in a 10 mL round-bottomed flask. Then, the aldehyde (0.5 mmol) and rhodanine