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Search for "X-ray analysis" in Full Text gives 339 result(s) in Beilstein Journal of Organic Chemistry. Showing first 200.

Synthesis of C70-fragment buckybowls bearing alkoxy substituents

  • Yumi Yakiyama,
  • Shota Hishikawa and
  • Hidehiro Sakurai

Beilstein J. Org. Chem. 2020, 16, 681–690, doi:10.3762/bjoc.16.66

Graphical Abstract
  • and optical properties were investigated by single crystal X-ray analysis and UV–vis spectroscopy. In the synthesis of dioxole derivative 5b, the regioisomer 5c was also produced. The yield of 5c was increased by increasing the reaction temperature, indicating that the rearrangement might involve the
  • ; anal. calcd for C29H14O2(H2O)0.4: C, 86.73%; H, 3.71%; found: C, 86.58%; H, 3.50%. Single crystal X-ray analysis The diffraction data for 5a and 5c were collected on a Rigaku FR-E Superbright rotating-anode X-ray source with a Mo-target (λ = 0.71073 Å) equipped with a Rigaku RAXIS VII imaging plate as
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Published 15 Apr 2020

Cascade trifluoromethylthiolation and cyclization of N-[(3-aryl)propioloyl]indoles

  • Ming-Xi Bi,
  • Shuai Liu,
  • Yangen Huang,
  • Xiu-Hua Xu and
  • Feng-Ling Qing

Beilstein J. Org. Chem. 2020, 16, 657–662, doi:10.3762/bjoc.16.62

Graphical Abstract
  • bearing an alkyl or electron-deficient aryl substituent on the alkynone were not successful. The structure of product 2a was unambiguously identified by single-crystal X-ray analysis. When the N-[(3-aryl)propioloyl]indole substrates (3a–d) with different substituents at the 3-position of the indole ring
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Published 08 Apr 2020

Asymmetric synthesis of CF2-functionalized aziridines by combined strong Brønsted acid catalysis

  • Xing-Fa Tan,
  • Fa-Guang Zhang and
  • Jun-An Ma

Beilstein J. Org. Chem. 2020, 16, 638–644, doi:10.3762/bjoc.16.60

Graphical Abstract
  • dr values, including alkyl or halogen-substituted phenyl and 2-naphthyl ketones (Scheme 2). Unfortunately, phenylglyoxal monohydrates bearing strong electron-withdrawing groups were not compatible with the current conditions. X-ray analysis of aziridine 4a confirmed the absolute configuration of the
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Published 07 Apr 2020

Synthesis of triphenylene-fused phosphole oxides via C–H functionalizations

  • Md. Shafiqur Rahman and
  • Naohiko Yoshikai

Beilstein J. Org. Chem. 2020, 16, 524–529, doi:10.3762/bjoc.16.48

Graphical Abstract
  • cyclization under the same conditions to give the corresponding product 8c albeit in a somewhat lower yield of 40%. The triphenylene-fused phosphole oxide 8a was recrystallized from CH2Cl2, and the molecular structure was unambiguously confirmed by single crystal X-ray analysis (Figure 2) [31]. As can be seen
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Published 27 Mar 2020

Synthesis and circularly polarized luminescence properties of BINOL-derived bisbenzofuro[2,3-b:3’,2’-e]pyridines (BBZFPys)

  • Ryo Takishima,
  • Yuji Nishii,
  • Tomoaki Hinoue,
  • Yoshitane Imai and
  • Masahiro Miura

Beilstein J. Org. Chem. 2020, 16, 325–336, doi:10.3762/bjoc.16.32

Graphical Abstract
  • characteristics in the solid state. The crystal structures of the coupling products were also evaluated by single crystal X-ray analysis and the well-ordered intermolecular stacking arrangements appeared to be responsible for the enhanced CPL. Keywords: BINOL; C–H activation; circularly polarized luminescence
  • numerous attempts for obtaining crystals suitable for the X-ray analysis. Based on these observations, it is reasonable to conclude that the tert-butyl substituents effectively restricted the stacking structure to the specific conformations, thereby facilitating the assembly of well-ordered aggregates in
  • . Compound 4b: Synthesized similarly to 4b from 3b (254 mg, 0.30 mmol). Purified by silica gel column chromatography (eluent: hexane/EtOAc 4:1) and GPC to give the title compound as pale yellow solid; (S)-4b (45.4 mg, 18% yield), (R)-4b (30.2 mg, 12% yield). Single crystals suitable for the X-ray analysis
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Published 06 Mar 2020

Ultrasonic-assisted unusual four-component synthesis of 7-azolylamino-4,5,6,7-tetrahydroazolo[1,5-a]pyrimidines

  • Yana I. Sakhno,
  • Maryna V. Murlykina,
  • Oleksandr I. Zbruyev,
  • Anton V. Kozyryev,
  • Svetlana V. Shishkina,
  • Dmytro Sysoiev,
  • Vladimir I. Musatov,
  • Sergey M. Desenko and
  • Valentyn A. Chebanov

Beilstein J. Org. Chem. 2020, 16, 281–289, doi:10.3762/bjoc.16.27

Graphical Abstract
  • pyrimidine NH group and cross-peaks of the NH group with protons of the aromatic system, thus excluding structure B (Figure 1). Eventually, the structure of tetrahydropyrimidines 4 was proven by X-ray analysis carried out for a single crystal of one diastereomer of compound 4g, which allowed assignment of
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Published 27 Feb 2020

Synthesis of 4-(2-fluorophenyl)-7-methoxycoumarin: experimental and computational evidence for intramolecular and intermolecular C–F···H–C bonds

  • Vuyisa Mzozoyana,
  • Fanie R. van Heerden and
  • Craig Grimmer

Beilstein J. Org. Chem. 2020, 16, 190–199, doi:10.3762/bjoc.16.22

Graphical Abstract
  • be possible to see F–C4a coupling of 1–1.5 Hz, since the F–C5 coupling is observable at a similar magnitude. The model (B3LYP/6-311G) seems to work reasonably well for coupling between F and H3, H5, C3, C4, and C5 but not for C4a. The single crystal X-ray analysis of coumarin 6 was carried out as it
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Published 10 Feb 2020

[1,3]/[1,4]-Sulfur atom migration in β-hydroxyalkylphosphine sulfides

  • Katarzyna Włodarczyk,
  • Piotr Borowski and
  • Marek Stankevič

Beilstein J. Org. Chem. 2020, 16, 88–105, doi:10.3762/bjoc.16.11

Graphical Abstract
  • compounds failed to give single crystals for X-ray analysis. The presence of an oxygen atom attached to the phosphorus atom in the products could be deduced based on 1H and 13C NMR analysis. In the 1H NMR spectra of phosphine sulfide 12, the chemical shifts of the signals belonging to the aromatic protons
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Published 21 Jan 2020

Influence of the cis/trans configuration on the supramolecular aggregation of aryltriazoles

  • Sara Tejera,
  • Giada Caniglia,
  • Rosa L. Dorta,
  • Andrea Favero,
  • Javier González-Platas and
  • Jesús T. Vázquez

Beilstein J. Org. Chem. 2019, 15, 2881–2888, doi:10.3762/bjoc.15.282

Graphical Abstract
  • ) and its X-ray analysis was not accurate enough to resolve its structure. However, its crystal packing (Figure 5) deserves discussion. As with compound 12, this packing revealed a number of π–bromine interactions [19], together with a high degree of π–π stacking interactions between the aromatic rings
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Published 28 Nov 2019

Preparation of anthracene-based tetraperimidine hexafluorophosphate and selective recognition of chromium(III) ions

  • Qing-Xiang Liu,
  • Feng Yang,
  • Zhi-Xiang Zhao,
  • Shao-Cong Yu and
  • Yue Ding

Beilstein J. Org. Chem. 2019, 15, 2847–2855, doi:10.3762/bjoc.15.278

Graphical Abstract
  • 10.3762/bjoc.15.278 Abstract A novel anthracene-based tetraperimidine hexafluorophosphate 3 was prepared, and its structure was determined through X-ray analysis, HRMS as well as 1H and 13C NMR spectroscopy. In the cationic moiety of 3, two (N-ethylperimidinyl–C2H4)2NCH2– arms were attached to the 9- and
  • X-ray analysis as well as 1H and 13C NMR spectroscopy. Particularly, compound 3 was tested as a chemosensor for the recognition of Cr3+ through fluorescence, UV, IR, and 1H NMR spectroscopy along with HRMS. Altogether, the results indicate the utility of 3 as an effective chemosensor for Cr3
  • upon complexation, and the C=N absorption band at 1664 cm−1 shifted to a value of 1672 cm−1. Conclusion In summary, a new anthracene-based tetraperimidine hexafluorophosphate 3 was prepared, and its structure was determined through X-ray analysis and 1H and 13C NMR spectroscopy. Compound 3 was proved
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Published 25 Nov 2019

One-pot synthesis of substituted pyrrolo[3,4-b]pyridine-4,5-diones based on the reaction of N-(1-(4-hydroxy-6-methyl-2-oxo-2H-pyran-3-yl)-2-oxo-2-arylethyl)acetamide with amines

  • Valeriya G. Melekhina,
  • Andrey N. Komogortsev,
  • Boris V. Lichitsky,
  • Vitaly S. Mityanov,
  • Artem N. Fakhrutdinov,
  • Arkady A. Dudinov,
  • Vasily A. Migulin,
  • Yulia V. Nelyubina,
  • Elizaveta K. Melnikova and
  • Michail M. Krayushkin

Beilstein J. Org. Chem. 2019, 15, 2840–2846, doi:10.3762/bjoc.15.277

Graphical Abstract
  • fragments proceeds first, followed by intramolecular cyclization (Scheme 4B). The structure of the 4-chloro-substituted pyrrolopyrimidinone 1e was proven by single crystal X-ray analysis (Figure 1). Despite the unambiguous dominance of the pyridone-based conformation in the solid state of 1e, two tautomers
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Published 25 Nov 2019

A chiral self-sorting photoresponsive coordination cage based on overcrowded alkenes

  • Constantin Stuckhardt,
  • Diederik Roke,
  • Wojciech Danowski,
  • Edwin Otten,
  • Sander J. Wezenberg and
  • Ben L. Feringa

Beilstein J. Org. Chem. 2019, 15, 2767–2773, doi:10.3762/bjoc.15.268

Graphical Abstract
  • different cage structures. Interestingly, the cage structures with Pd2L4 constitution were shown to be homochiral, forming single diastereomers as evident from NMR, CD and X-ray analysis, supported by DFT calculations. Additionally, the cage structures were able to bind OTs− inside their cavity. Although
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Published 15 Nov 2019

Unexpected one-pot formation of the 1H-6a,8a-epiminotricyclopenta[a,c,e][8]annulene system from cyclopentanone, ammonia and dimethyl fumarate. Synthesis of highly strained polycyclic nitroxide and EPR study

  • Sergey A. Dobrynin,
  • Igor A. Kirilyuk,
  • Yuri V. Gatilov,
  • Andrey A. Kuzhelev,
  • Olesya A. Krumkacheva,
  • Matvey V. Fedin,
  • Michael K. Bowman and
  • Elena G. Bagryanskaya

Beilstein J. Org. Chem. 2019, 15, 2664–2670, doi:10.3762/bjoc.15.259

Graphical Abstract
  • ). The structure of the compound was finally confirmed by X-ray analysis and elemental analysis data (Figure 1). A possible mechanism for the formation of 1 is presented in Scheme 2. It is well-known that cyclopentanone is prone to self-condensation. In the presence of ammonia these reactions may lead to
  • assignment was based on the single-crystal X-ray analysis (Figure 4) and a possible mechanism for this hydroxylation is shown in Scheme 4. Oxidation of amines with peracids is known to proceed through oxoammonium cation formation [12]. The close proximity of this reactive group to the allyl hydrogen results
  • nitroxide 6 synthesis. NMR Assignment of 1 based on the HSQC, COSY 1H,1H and 1H,13C spectra. Supporting Information Supporting Information File 552: Copies of the IR and 1H, 13C, HMBC, HSQC NMR spectra and X-ray analysis data. Acknowledgements This study was financially supported by the Ministry of
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Published 07 Nov 2019

AgNTf2-catalyzed formal [3 + 2] cycloaddition of ynamides with unprotected isoxazol-5-amines: efficient access to functionalized 5-amino-1H-pyrrole-3-carboxamide derivatives

  • Ziping Cao,
  • Jiekun Zhu,
  • Li Liu,
  • Yuanling Pang,
  • Laijin Tian,
  • Xuejun Sun and
  • Xin Meng

Beilstein J. Org. Chem. 2019, 15, 2623–2630, doi:10.3762/bjoc.15.255

Graphical Abstract
  • transformations, several desired 5-amino-1H-pyrrole-3-carboxamide products were easily obtained in 96–98% yields (10ab–ad). The structure of 10ad was further confirmed unambiguously by single crystal X-ray analysis (Figure 4). The sterically demanding t-Bu group installed at 5-aminoisoxazole 8e has an obvious
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Published 04 Nov 2019

Self-assembled coordination thioether silver(I) macrocyclic complexes for homogeneous catalysis

  • Zhen Cao,
  • Aline Lacoudre,
  • Cybille Rossy and
  • Brigitte Bibal

Beilstein J. Org. Chem. 2019, 15, 2465–2472, doi:10.3762/bjoc.15.239

Graphical Abstract
  • reactions of alkynes. Results and Discussion Synthesis of silver(I) complexes Ligand 1 was synthesized in one step, from commercially available 9,10-dibromoanthracene and 2-(methylthio)phenylboronic acid, using a Suzuki–Miyaura cross-coupling reaction. Notably, the yield was low (26%) [55], and the X-ray
  • analysis of monocrystals revealed the syn-conformation of 1 (Scheme 1). A variable temperature 1H NMR (VT-NMR, Figures S10–12 in Supporting Information File 1) experiment conducted on syn-1 in the range of –30 to 110 °C in C2D2Cl4 showed the broadening of proton signals, due to the restricted rotation of
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Published 17 Oct 2019

Indium-mediated C-allylation of melibiose

  • Christian Denner,
  • Manuel Gintner,
  • Hanspeter Kählig and
  • Walther Schmid

Beilstein J. Org. Chem. 2019, 15, 2458–2464, doi:10.3762/bjoc.15.238

Graphical Abstract
  • elongation methodology allows for a short, efficient and diastereoselective approach towards complex glycosylated carbohydrate structures. The stereochemical outcome of the key intermediates, allylated disaccharides, has been determined by X-ray analysis. Ozonolysis of the introduced double bond yielded the
  • main product was crystallized and the configuration was determined by X-ray analysis proving the expected syn-configuration (compound 2-syn) [CCDC 1922520] (Figure 1). Epimer 2-syn was applied to Zemplén conditions prior to the ozonolysis. Conventional work-up, neutralization with acidic ion exchange
  • , 20.71, 20.69, 20.66, 20.64, 20.58 (9 × O(C=O)CH3) ppm; HRMS (ESI+) m/z: [M + NH4]+ calcd for C32H48NO21+, 782.2713; found, 782.2720. X-ray analysis of the main C-allylation product 2-syn [CCDC 1922520]. Structures of the main products 5-syn-β and 5-anti-β. Indium-mediated allylation of melibiose (1
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Published 16 Oct 2019

In water multicomponent synthesis of low-molecular-mass 4,7-dihydrotetrazolo[1,5-a]pyrimidines

  • Irina G. Tkachenko,
  • Sergey A. Komykhov,
  • Vladimir I. Musatov,
  • Svitlana V. Shishkina,
  • Viktoriya V. Dyakonenko,
  • Vladimir N. Shvets,
  • Mikhail V. Diachkov,
  • Valentyn A. Chebanov and
  • Sergey M. Desenko

Beilstein J. Org. Chem. 2019, 15, 2390–2397, doi:10.3762/bjoc.15.231

Graphical Abstract
  • the NMR data corresponded quite well to the proposed structure 9, they did not allow the complete rejection of the isomeric structure 9' for the reaction product. The final confirmation of structures 9a–g was achieved by X-ray analysis of 9a (Figure 1). A specific behavior of acetylacetone (10) as the
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Published 08 Oct 2019

Aggregation-induced emission effect on turn-off fluorescent switching of a photochromic diarylethene

  • Luna Kono,
  • Yuma Nakagawa,
  • Ayako Fujimoto,
  • Ryo Nishimura,
  • Yohei Hattori,
  • Toshiki Mutai,
  • Nobuhiro Yasuda,
  • Kenichi Koizumi,
  • Satoshi Yokojima,
  • Shinichiro Nakamura and
  • Kingo Uchida

Beilstein J. Org. Chem. 2019, 15, 2204–2212, doi:10.3762/bjoc.15.217

Graphical Abstract
  • substrate [19]. The X-ray analysis data of a single crystal of 1o is shown in Figure S1 and Table S1 in Supporting Information File 1. The distance between two reactive carbon atoms in the thiophene rings was obtained to be 3.534 Å, which is less than 4.2 Å. It indicates the molecule is photoreactive in the
  • 214: X-ray analysis data of a single crystal of 1o. Supporting Information File 215: Movie 1, quenching rate dependence on the environmental conditions. Supporting Information File 216: Movie 2, fluorescent color change of 1o. Acknowledgements This work was supported by JSPS KAKENHI Grant Number
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Published 20 Sep 2019

Characterization of two new degradation products of atorvastatin calcium formed upon treatment with strong acids

  • Jürgen Krauß,
  • Monika Klimt,
  • Markus Luber,
  • Peter Mayer and
  • Franz Bracher

Beilstein J. Org. Chem. 2019, 15, 2085–2091, doi:10.3762/bjoc.15.206

Graphical Abstract
  • investigated here, even direct protonation at C-3 of the pyrrole by strong acid is most likely, due to the significant basicity of pyrroles. Delocalization of the positive charge (A ↔ A’) as shown in Scheme 2 will support the initial ring protonation step. The X-ray analysis of compound 7 revealed that the
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Published 02 Sep 2019

Regioselective Pd-catalyzed direct C1- and C2-arylations of lilolidine for the access to 5,6-dihydropyrrolo[3,2,1-ij]quinoline derivatives

  • Hai-Yun Huang,
  • Haoran Li,
  • Thierry Roisnel,
  • Jean-François Soulé and
  • Henri Doucet

Beilstein J. Org. Chem. 2019, 15, 2069–2075, doi:10.3762/bjoc.15.204

Graphical Abstract
  • structure of 2 was confirmed by X-ray analysis. A lower yield of 7 was obtained for the reaction of 4-bromobenzaldehyde with lilolidine due to the formation of degradation products. Good yields in 8 and 9 were obtained from 4-chloro- and 4-carbonitrile-substituted aryl bromides. In all cases, with these
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Published 29 Aug 2019

Synthesis of benzo[d]imidazo[2,1-b]benzoselenoazoles: Cs2CO3-mediated cyclization of 1-(2-bromoaryl)benzimidazoles with selenium

  • Mio Matsumura,
  • Yuki Kitamura,
  • Arisa Yamauchi,
  • Yoshitaka Kanazawa,
  • Yuki Murata,
  • Tadashi Hyodo,
  • Kentaro Yamaguchi and
  • Shuji Yasuike

Beilstein J. Org. Chem. 2019, 15, 2029–2035, doi:10.3762/bjoc.15.199

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  • tetracyclic heterocycles are all novel compounds. Single-crystal X-ray analysis of the parent benzimidazo[2,1-b]benzoselenoazole revealed that the tetracyclic ring is almost planar. Absorption spectroscopy data of the benzimidazo[2,1-b]benzoselenoazoles showed the λmax was dependent on the number of rings
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Published 26 Aug 2019

Fluorinated azobenzenes as supramolecular halogen-bonding building blocks

  • Esther Nieland,
  • Oliver Weingart and
  • Bernd M. Schmidt

Beilstein J. Org. Chem. 2019, 15, 2013–2019, doi:10.3762/bjoc.15.197

Graphical Abstract
  • the Supporting Information File 1, Figures S6–S8). In addition to that, slow evaporation of an equimolar solution of U1 and A2 in benzene furnished red-orange single crystals suitable for X-ray analysis of a [2 + 2] halogen-bonded box, U1···A2, over the course of a few days in quantitative yield
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Published 23 Aug 2019

Halide metathesis in overdrive: mechanochemical synthesis of a heterometallic group 1 allyl complex

  • Ross F. Koby,
  • Nicholas R. Rightmire,
  • Nathan D. Schley,
  • Timothy P. Hanusa and
  • William W. Brennessel

Beilstein J. Org. Chem. 2019, 15, 1856–1863, doi:10.3762/bjoc.15.181

Graphical Abstract
  • produced crystals that were yellow-orange; they were highly soluble in C6D6, giving a bright red solution. Single crystal X-ray analysis identified the crystals as the heterometallic complex [KCsA'2] (see below). The 1H NMR spectrum of the products from the 1:1 and 3:1 grinds were identical. It should be
  • analogous solvate is obtained, and the resulting crystals are of higher quality than those from toluene. Single crystal X-ray analysis reveals that it has a structure that is qualitatively the same as the toluene solvate, and only the benzene solvate is discussed here. Like the unsolvated complex [KA']∞ [17
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Published 02 Aug 2019
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  • hydrolysis strongly depend on the substituent X on the phosphorus atom. Ions containing a labile P–X bond (X = Cl, O, S), namely A, B, and F–H, gave unstable adducts 2 (registered by GC–MS), which are further transformed into acids 3. The structure of compound 3a was confirmed by X-ray analysis (see
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Published 08 Jul 2019

Synthesis of pyrrolo[1,2-a]quinolines by formal 1,3-dipolar cycloaddition reactions of quinolinium salts

  • Anthony Choi,
  • Rebecca M. Morley and
  • Iain Coldham

Beilstein J. Org. Chem. 2019, 15, 1480–1484, doi:10.3762/bjoc.15.149

Graphical Abstract
  • triethylamine and were pleased to obtain good yields of the adducts 7a–c and 8a,b (Scheme 2). In each case, the products 7a–c and 8a,b were formed as a single regioisomer and stereoisomer. The selectivity in favour of the isomer drawn in Scheme 2 was verified by single crystal X-ray analysis of the adduct 7c
  • to undergo reaction with the ylides derived from the salts 4 and 5. In both cases, very good yields of the tetracyclic adducts 9 and 10 were obtained after heating for only 1 h (Scheme 3). The relative stereochemistry of the adduct 9 was determined by single crystal X-ray analysis (Figure 2). To
  • with N-methylmaleimide in the presence of triethylamine in methanol to give the desired adducts 15a and 15b as single stereoisomers (Scheme 5). The stereochemistry of product 15a was confirmed by single crystal X-ray analysis (see Supporting Information File 1) and matches the relative configuration of
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Published 03 Jul 2019
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